Cp4.1LG01g19970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g19970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG01: 17024029 .. 17025579 (+)
RNA-Seq ExpressionCp4.1LG01g19970
SyntenyCp4.1LG01g19970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCGTCTTCCCCTTCTTCTGCTCGAACTCCCATTCGCTCAAGATCGACCTCTCACACTCGATTCAACAATCCCTCACCGGAACCGTCAAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATCATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTAGAAGATGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCCTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCGTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCAGATGAGTTTTTGCAGATAGCCAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAAATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTCTTATGTGTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTCCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAAAGAAATCATGGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCCGATGCAGCTAGAAGGCTGTTAGATGAGATGATATCTTATGGAACATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAAGAGGTTGCCCGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTATCATTTTGAAACATTCAACTTTGTCTAAACTAAAACAGAGCCTTTTTGAAGTTAGAAAGGAATTTATGTATGACGAGCTAATGATGAAGTTGAAATTTAGTGAGAGATGA

mRNA sequence

ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCGTCTTCCCCTTCTTCTGCTCGAACTCCCATTCGCTCAAGATCGACCTCTCACACTCGATTCAACAATCCCTCACCGGAACCGTCAAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATCATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTAGAAGATGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCCTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCGTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCAGATGAGTTTTTGCAGATAGCCAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAAATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTCTTATGTGTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTCCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAAAGAAATCATGGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCCGATGCAGCTAGAAGGCTGTTAGATGAGATGATATCTTATGGAACATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAAGAGGTTGCCCGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTATCATTTTGAAACATTCAACTTTGTCTAAACTAAAACAGAGCCTTTTTGAAGTTAGAAAGGAATTTATGTATGACGAGCTAATGATGAAGTTGAAATTTAGTGAGAGATGA

Coding sequence (CDS)

ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCGTCTTCCCCTTCTTCTGCTCGAACTCCCATTCGCTCAAGATCGACCTCTCACACTCGATTCAACAATCCCTCACCGGAACCGTCAAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATCATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTAGAAGATGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCCTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCGTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCAGATGAGTTTTTGCAGATAGCCAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAAATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTCTTATGTGTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTCCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAAAGAAATCATGGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCCGATGCAGCTAGAAGGCTGTTAGATGAGATGATATCTTATGGAACATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAAGAGGTTGCCCGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTATCATTTTGAAACATTCAACTTTGTCTAAACTAAAACAGAGCCTTTTTGAAGTTAGAAAGGAATTTATGTATGACGAGCTAATGATGAAGTTGAAATTTAGTGAGAGATGA

Protein sequence

MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER
Homology
BLAST of Cp4.1LG01g19970 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 2.7e-49
Identity = 123/430 (28.60%), Postives = 224/430 (52.09%), Query Frame = 0

Query: 72  KLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQH 131
           K + +++ ++  + L+  L+++G++VS+E VEDVL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFE 191
           S  A++++++   K   ++ MWD + +M+ + ++++ TF  V   Y  A +V +AI +F 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAIVLEGWESEGN 251
           VM++Y  P ++VA N LLSA+C+  N + A E  +  + +  PD  +Y+I+LEGW  E N
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPN 252

Query: 252 IVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRLKDKMCYPGFKF 311
           +  AR+ F EMI+  G  P +   Y+  + +L K    + EAL   + +   +C P    
Sbjct: 253 LPKAREVFREMID-AGCHP-DIVTYSIMVDILCK-AGRVDEALGIVRSMDPSICKPTTFI 312

Query: 312 FKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEM 371
           + + +        ++     + E ME    + D  ++NS+I   C  N      R+L EM
Sbjct: 313 YSVLVHTYGTENRLEEAVDTFLE-MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 372

Query: 372 ISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDP 431
            S G  PN ++ N++ R L++  +  EA  +F +M+K    P        ++++ E ++ 
Sbjct: 373 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 432

Query: 432 NGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRGIILKHSTLSKL 491
             A KVWK M K          + LI GL +++   +A     EMI+ GI     T  +L
Sbjct: 433 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 492

Query: 492 KQSLFEVRKE 502
           +Q L +  +E
Sbjct: 493 RQLLIKEERE 497

BLAST of Cp4.1LG01g19970 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.7e-40
Identity = 115/439 (26.20%), Postives = 214/439 (48.75%), Query Frame = 0

Query: 74  LCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQHSP 133
           +C+I+   +   +E +L E  V++S   +E+VLK        ++  F+W+  +   +H+ 
Sbjct: 69  ICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTT 128

Query: 134 YAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFEVM 193
             +N +++ LGK   F+ +W  +  MK + L+S  TFA +   Y  A +VK+AI +F  M
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188

Query: 194 DRYGCPRDVVALNSLLSAICRDGNTKDADE-FLQIAKGKIRPDPDSYAIVLEGWESEGNI 253
           + +G   +    N +L  + +  N  DA + F ++ K +  PD  SY I+LEGW  E N+
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248

Query: 254 VCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRLKDKMCYPGFKFF 313
           +   +   EM ++ G++P +  AY   +    K      EA+  F  ++ + C P    F
Sbjct: 249 LRVDEVNREMKDE-GFEP-DVVAYGIIINAHCK-AKKYEEAIRFFNEMEQRNCKPSPHIF 308

Query: 314 KLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEMI 373
              ++     + +      + E  +S  F  +   YN+++   C     + A + +DEM 
Sbjct: 309 CSLINGLGSEKKLNDALEFF-ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 368

Query: 374 SYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDPN 433
             G  PN  TY+++   L++ ++ +EA  ++  M      P+ +  +  VR++   E  +
Sbjct: 369 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 428

Query: 434 GAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRGIILKHSTLSKLK 493
            AIK+W  M          + + LI  L  + +L EA +Y NEM+D GI       S+LK
Sbjct: 429 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 488

Query: 494 QSLFEVRKEFMYDELMMKL 512
           Q+L +  ++    +L++K+
Sbjct: 489 QTLLDEGRKDKVTDLVVKM 500

BLAST of Cp4.1LG01g19970 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 114/458 (24.89%), Postives = 215/458 (46.94%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+Q G  P +  A+N  L  LL+      +A+  
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKP-DIVAHNVMLEGLLRS-RKKSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K    A+ I+++M++NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 478

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW+ M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 538

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 572

BLAST of Cp4.1LG01g19970 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-36
Identity = 112/458 (24.45%), Postives = 213/458 (46.51%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+  G  P +  A+N  L  LL+      +A+  
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K     + I+++M++NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 478

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW  M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 538

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 572

BLAST of Cp4.1LG01g19970 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.0e-36
Identity = 112/458 (24.45%), Postives = 212/458 (46.29%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+  G  P +  A+N  L  LL+      +A+  
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 357

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 358 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 417

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K     + I+++M++NE  PS  
Sbjct: 418 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 477

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW  M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 478 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 537

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 538 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 571

BLAST of Cp4.1LG01g19970 vs. NCBI nr
Match: XP_023511926.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023511935.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1029 bits (2660), Expect = 0.0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516

BLAST of Cp4.1LG01g19970 vs. NCBI nr
Match: XP_022963446.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1008 bits (2605), Expect = 0.0
Identity = 505/516 (97.87%), Postives = 508/516 (98.45%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTP RS S SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMD YGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLC+LLKDPNGLHEALM FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYG FPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQ+RLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516

BLAST of Cp4.1LG01g19970 vs. NCBI nr
Match: XP_022990962.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1005 bits (2598), Expect = 0.0
Identity = 502/516 (97.29%), Postives = 509/516 (98.64%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTP RS S SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHPRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVD+LGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDILGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAI+SFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIMSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIVESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARR+LDEMISYGTFPNLETYNLLFR+LLKEKKLREASSIFDEM+KNEFVPSHANCKA
Sbjct: 361 ADAARRVLDEMISYGTFPNLETYNLLFRYLLKEKKLREASSIFDEMIKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEI NFLIVGLQDQKRLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIANFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           IILKHSTLSKLKQSLF VRKEFMYDELMMKLKF+ER
Sbjct: 481 IILKHSTLSKLKQSLFVVRKEFMYDELMMKLKFTER 516

BLAST of Cp4.1LG01g19970 vs. NCBI nr
Match: KAG7032727.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 944 bits (2440), Expect = 0.0
Identity = 470/482 (97.51%), Postives = 473/482 (98.13%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTP RS S SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMD YGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLC+LLKDPNGLHEALM FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYG FPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQ+RLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 II 482
            I
Sbjct: 481 HI 482

BLAST of Cp4.1LG01g19970 vs. NCBI nr
Match: XP_022141574.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momordica charantia])

HSP 1 Score: 868 bits (2242), Expect = 4.47e-315
Identity = 424/515 (82.33%), Postives = 472/515 (91.65%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P+ S S S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NCVKDAIMTFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLCVLLK P+GLHEAL  FKRL
Sbjct: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLW E++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
            DAARRLLD+MI YG FP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGLQDQKRLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLQDQKRLPEAVKYAHEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSE 515
           ++LKHSTLSKLKQSL EVRKEF+YDELM KLK  E
Sbjct: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 515

BLAST of Cp4.1LG01g19970 vs. ExPASy TrEMBL
Match: A0A6J1HG58 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111463690 PE=4 SV=1)

HSP 1 Score: 1008 bits (2605), Expect = 0.0
Identity = 505/516 (97.87%), Postives = 508/516 (98.45%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTP RS S SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMD YGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLC+LLKDPNGLHEALM FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYG FPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQ+RLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516

BLAST of Cp4.1LG01g19970 vs. ExPASy TrEMBL
Match: A0A6J1JKD0 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487696 PE=4 SV=1)

HSP 1 Score: 1005 bits (2598), Expect = 0.0
Identity = 502/516 (97.29%), Postives = 509/516 (98.64%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQSSSSPSSARTP RS S SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHPRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVD+LGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDILGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAI+SFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIMSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIVESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARR+LDEMISYGTFPNLETYNLLFR+LLKEKKLREASSIFDEM+KNEFVPSHANCKA
Sbjct: 361 ADAARRVLDEMISYGTFPNLETYNLLFRYLLKEKKLREASSIFDEMIKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEI NFLIVGLQDQKRLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIANFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           IILKHSTLSKLKQSLF VRKEFMYDELMMKLKF+ER
Sbjct: 481 IILKHSTLSKLKQSLFVVRKEFMYDELMMKLKFTER 516

BLAST of Cp4.1LG01g19970 vs. ExPASy TrEMBL
Match: A0A6J1CJ17 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111011904 PE=4 SV=1)

HSP 1 Score: 868 bits (2242), Expect = 2.17e-315
Identity = 424/515 (82.33%), Postives = 472/515 (91.65%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P+ S S S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NCVKDAIMTFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLCVLLK P+GLHEAL  FKRL
Sbjct: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLW E++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360

Query: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
            DAARRLLD+MI YG FP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGLQDQKRLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLQDQKRLPEAVKYAHEMIDRG 480

Query: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSE 515
           ++LKHSTLSKLKQSL EVRKEF+YDELM KLK  E
Sbjct: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 515

BLAST of Cp4.1LG01g19970 vs. ExPASy TrEMBL
Match: A0A5A7V509 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002860 PE=4 SV=1)

HSP 1 Score: 840 bits (2169), Expect = 3.64e-304
Identity = 414/519 (79.77%), Postives = 470/519 (90.56%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSAR-TPIRSRSTSH-TRFNNPSPEPS-RSKTPH 60
           MGE NKRRLSD+ HQRSKKH  SSSPSSA  +PI S S SH T F+NPSP+P  ++ TPH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSPQPPHKNSTPH 60

Query: 61  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 120
           F+SYLDFPNLPFKIKL+CEIIAN+ S+++E  LE+TG+ V++EDVE+VLKLSY FPGSS+
Sbjct: 61  FLSYLDFPNLPFKIKLMCEIIANSPSLNVEKALEDTGIHVTQEDVEEVLKLSYSFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLI+DMLGKNL+F+PMWDA+KSMK+EGL+SLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAIKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 240
           +VANRVKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDADEFLQIAK KIRPDPD
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVALNSLLSAICRDGNTKDADEFLQIAKRKIRPDPD 240

Query: 241 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSF 300
           SYAIVLEGWESEGN VCA+QTF EMIE+IGWDPTNTPAYNSFLCVLL+DPNGL  AL++F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCH 360
           +RLKDKMCYPGFKFFKLALDEC K  D+KAGKYLW EI++ INFQPDT+M+NSMI LCCH
Sbjct: 301 ERLKDKMCYPGFKFFKLALDECVKCGDIKAGKYLWNEIIQCINFQPDTYMFNSMIALCCH 360

Query: 361 QNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 420
           QND D ARRLLDEMI YG FPN ETYNLLF+FLLK +KLR+AS+I DEM+KNEF+PSHAN
Sbjct: 361 QNDTDEARRLLDEMICYGAFPNAETYNLLFQFLLKGRKLRDASAILDEMIKNEFIPSHAN 420

Query: 421 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMI 480
           C AA+RIYIE++DPNGA+KVWKCM+K Y+SDLEE GNFLIV LQDQKRLPEAVKYA+EM+
Sbjct: 421 CTAAIRIYIESQDPNGALKVWKCMLKNYDSDLEETGNFLIVWLQDQKRLPEAVKYAHEMM 480

Query: 481 DRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           DR I LK+STL+KLK SLFEVRKE MYDELM+K K SE+
Sbjct: 481 DRPIKLKNSTLAKLKHSLFEVRKESMYDELMVKFKCSEK 519

BLAST of Cp4.1LG01g19970 vs. ExPASy TrEMBL
Match: A0A1S3CCN3 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103499319 PE=4 SV=1)

HSP 1 Score: 840 bits (2169), Expect = 3.64e-304
Identity = 414/519 (79.77%), Postives = 470/519 (90.56%), Query Frame = 0

Query: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSAR-TPIRSRSTSH-TRFNNPSPEPS-RSKTPH 60
           MGE NKRRLSD+ HQRSKKH  SSSPSSA  +PI S S SH T F+NPSP+P  ++ TPH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSPQPPHKNSTPH 60

Query: 61  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 120
           F+SYLDFPNLPFKIKL+CEIIAN+ S+++E  LE+TG+ V++EDVE+VLKLSY FPGSS+
Sbjct: 61  FLSYLDFPNLPFKIKLMCEIIANSPSLNVEKALEDTGIHVTQEDVEEVLKLSYSFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLI+DMLGKNL+F+PMWDA+KSMK+EGL+SLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAIKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 240
           +VANRVKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDADEFLQIAK KIRPDPD
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVALNSLLSAICRDGNTKDADEFLQIAKRKIRPDPD 240

Query: 241 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSF 300
           SYAIVLEGWESEGN VCA+QTF EMIE+IGWDPTNTPAYNSFLCVLL+DPNGL  AL++F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCH 360
           +RLKDKMCYPGFKFFKLALDEC K  D+KAGKYLW EI++ INFQPDT+M+NSMI LCCH
Sbjct: 301 ERLKDKMCYPGFKFFKLALDECVKCGDIKAGKYLWNEIIQCINFQPDTYMFNSMIALCCH 360

Query: 361 QNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 420
           QND D ARRLLDEMI YG FPN ETYNLLF+FLLK +KLR+AS+I DEM+KNEF+PSHAN
Sbjct: 361 QNDTDEARRLLDEMICYGAFPNAETYNLLFQFLLKGRKLRDASAILDEMIKNEFIPSHAN 420

Query: 421 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMI 480
           C AA+RIYIE++DPNGA+KVWKCM+K Y+SDLEE GNFLIV LQDQKRLPEAVKYA+EM+
Sbjct: 421 CTAAIRIYIESQDPNGALKVWKCMLKNYDSDLEETGNFLIVWLQDQKRLPEAVKYAHEMM 480

Query: 481 DRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSER 516
           DR I LK+STL+KLK SLFEVRKE MYDELM+K K SE+
Sbjct: 481 DRPIKLKNSTLAKLKHSLFEVRKESMYDELMVKFKCSEK 519

BLAST of Cp4.1LG01g19970 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-50
Identity = 123/430 (28.60%), Postives = 224/430 (52.09%), Query Frame = 0

Query: 72  KLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQH 131
           K + +++ ++  + L+  L+++G++VS+E VEDVL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFE 191
           S  A++++++   K   ++ MWD + +M+ + ++++ TF  V   Y  A +V +AI +F 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAIVLEGWESEGN 251
           VM++Y  P ++VA N LLSA+C+  N + A E  +  + +  PD  +Y+I+LEGW  E N
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPN 252

Query: 252 IVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRLKDKMCYPGFKF 311
           +  AR+ F EMI+  G  P +   Y+  + +L K    + EAL   + +   +C P    
Sbjct: 253 LPKAREVFREMID-AGCHP-DIVTYSIMVDILCK-AGRVDEALGIVRSMDPSICKPTTFI 312

Query: 312 FKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEM 371
           + + +        ++     + E ME    + D  ++NS+I   C  N      R+L EM
Sbjct: 313 YSVLVHTYGTENRLEEAVDTFLE-MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 372

Query: 372 ISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDP 431
            S G  PN ++ N++ R L++  +  EA  +F +M+K    P        ++++ E ++ 
Sbjct: 373 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 432

Query: 432 NGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRGIILKHSTLSKL 491
             A KVWK M K          + LI GL +++   +A     EMI+ GI     T  +L
Sbjct: 433 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 492

Query: 492 KQSLFEVRKE 502
           +Q L +  +E
Sbjct: 493 RQLLIKEERE 497

BLAST of Cp4.1LG01g19970 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-41
Identity = 115/439 (26.20%), Postives = 214/439 (48.75%), Query Frame = 0

Query: 74  LCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQHSP 133
           +C+I+   +   +E +L E  V++S   +E+VLK        ++  F+W+  +   +H+ 
Sbjct: 69  ICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTT 128

Query: 134 YAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFEVM 193
             +N +++ LGK   F+ +W  +  MK + L+S  TFA +   Y  A +VK+AI +F  M
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188

Query: 194 DRYGCPRDVVALNSLLSAICRDGNTKDADE-FLQIAKGKIRPDPDSYAIVLEGWESEGNI 253
           + +G   +    N +L  + +  N  DA + F ++ K +  PD  SY I+LEGW  E N+
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248

Query: 254 VCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRLKDKMCYPGFKFF 313
           +   +   EM ++ G++P +  AY   +    K      EA+  F  ++ + C P    F
Sbjct: 249 LRVDEVNREMKDE-GFEP-DVVAYGIIINAHCK-AKKYEEAIRFFNEMEQRNCKPSPHIF 308

Query: 314 KLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEMI 373
              ++     + +      + E  +S  F  +   YN+++   C     + A + +DEM 
Sbjct: 309 CSLINGLGSEKKLNDALEFF-ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 368

Query: 374 SYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDPN 433
             G  PN  TY+++   L++ ++ +EA  ++  M      P+ +  +  VR++   E  +
Sbjct: 369 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 428

Query: 434 GAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRGIILKHSTLSKLK 493
            AIK+W  M          + + LI  L  + +L EA +Y NEM+D GI       S+LK
Sbjct: 429 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 488

Query: 494 QSLFEVRKEFMYDELMMKL 512
           Q+L +  ++    +L++K+
Sbjct: 489 QTLLDEGRKDKVTDLVVKM 500

BLAST of Cp4.1LG01g19970 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 7.4e-39
Identity = 114/458 (24.89%), Postives = 215/458 (46.94%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+Q G  P +  A+N  L  LL+      +A+  
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKP-DIVAHNVMLEGLLRS-RKKSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K    A+ I+++M++NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 478

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW+ M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 538

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 572

BLAST of Cp4.1LG01g19970 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-37
Identity = 112/458 (24.45%), Postives = 213/458 (46.51%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+  G  P +  A+N  L  LL+      +A+  
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K     + I+++M++NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 478

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW  M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 538

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 572

BLAST of Cp4.1LG01g19970 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-37
Identity = 112/458 (24.45%), Postives = 212/458 (46.29%), Query Frame = 0

Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M +Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMS 298
            +Y ++L GW    N++ A + + +MI+  G  P +  A+N  L  LL+      +A+  
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 357

Query: 299 FKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCC 358
           F  +K K   P  + + + + +  K   ++     + ++++S   QPD  +Y  +I    
Sbjct: 358 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 417

Query: 359 HQNDADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHA 418
            Q   D    LL EM   G  P+ +TYN L + +  +K     + I+++M++NE  PS  
Sbjct: 418 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 477

Query: 419 NCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEM 478
                ++ Y    +      VW  M+K      +     LI GL  + +  EA +Y  EM
Sbjct: 478 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 537

Query: 479 IDRGIILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFS 515
           +D+G+       +K         +  +++EL  + KFS
Sbjct: 538 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 571

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FVX22.7e-4928.60Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
Q9C9A21.7e-4026.20Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
Q9LZP31.0e-3724.89Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
Q3EAF81.5e-3624.45Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
Q9LEQ72.0e-3624.45Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023511926.10.0100.00pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
XP_022963446.10.097.87pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
XP_022990962.10.097.29pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
KAG7032727.10.097.51Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022141574.14.47e-31582.33pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momor... [more]
Match NameE-valueIdentityDescription
A0A6J1HG580.097.87pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc... [more]
A0A6J1JKD00.097.29pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc... [more]
A0A6J1CJ172.17e-31582.33pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Mom... [more]
A0A5A7V5093.64e-30479.77Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CCN33.64e-30479.77pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT1G77360.11.9e-5028.60Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G71060.11.2e-4126.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G62470.17.4e-3924.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62540.11.1e-3724.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G14820.11.4e-3724.45Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 287..515
e-value: 1.4E-26
score: 95.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 113..272
e-value: 8.2E-18
score: 66.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 192..243
e-value: 0.011
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 343..389
e-value: 3.6E-10
score: 39.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 382..414
e-value: 1.3E-6
score: 26.2
coord: 347..379
e-value: 6.2E-7
score: 27.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 379..413
score: 11.049048
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..54
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 14..507
NoneNo IPR availablePANTHERPTHR46128:SF190SUBFAMILY NOT NAMEDcoord: 14..507
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 323..481

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g19970.1Cp4.1LG01g19970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding