Cp4.1LG01g18120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g18120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Chaperone protein dnaJ 15-like
Location	Cp4.1LG01: 15042187 .. 15043102 (+)
RNA-Seq Expression	Cp4.1LG01g18120
Synteny	Cp4.1LG01g18120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACGTAAGAAGATTATTAATCTGCGTTGGTCTAATTTTAAAGAACATAAAGATTATTATGGTTAATTTGGTCAGACATTTTGTTTGAGGGTAATATCTGAAAGATGGAATTTTCTTTTTCTTCATCTTTTCAGCATGTTTGGAACTCGAGTGGTGATTGATATTCAGCTCTGTTACAGTTCAGCTAGGCTTTAGGTGCATTAACATTAAATTACGAATTGCTGCAAGTGGTTACAGAATAAGATTTCAGCTAGGCTCTTGGTGTATTAAATTAAGTTACGCATTTCAATTTCCTCCCTTCCACTTTCAAATTTTTATATAAAAAAGAAATAAATTTGTTTTCATCTTTTGAACCATCCATCTGCAAAGTGATTCTTACCCCAAAAAATGTGGTAGATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGTTATGATGCGTTGTTATGATATTTAAAGAGATACTTCATTATTTTCAAATTCAAGATTTATATACTTTTGTAGGCCTTATGTGGCTTACACATACTTCCATCCCATACATAGTATTTTATTTTTCCCAATCAAAGCTTTCTCTGAGATTCAAATTGAGGTCACGATTGTTAATTAACTCTTCCATTGTGTAATTAATGTGTTCAGGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

mRNA sequence

ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

Coding sequence (CDS)

ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

Protein sequence

MNGKMLYANAQVETYHPDKNGSNTLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGMDMEIDLSNLGTVNTMFAALFSCKFIELFTGLVV

Homology

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy Swiss-Prot
Match: Q9ZSY2 (Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN +N    +L   +  S+ +++    +R   N                ALDA GM
Sbjct: 44  YHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGF------------EALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

[Close]

BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: XP_027365158.1 (chaperone protein dnaJ 15-like isoform X2 [Abrus precatorius])

HSP 1 Score: 88.6 bits (218), Expect = 4.10e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 25 LKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGMDMEIDLSNLGTV 84
          LKLQS L+R HILI S L Q+REG+MT L LR  S C    ALDA  MDMEIDLSNLGTV
Sbjct: 5  LKLQSYLKRLHILIVSCLTQKREGSMTALDLRSPSYCPSH-ALDADSMDMEIDLSNLGTV 64

Query: 85 NTMFAALFS 93
          NTMFAALFS
Sbjct: 65 NTMFAALFS 72

[Close]

BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: KAG6707162.1 (hypothetical protein I3842_06G018300 [Carya illinoinensis])

HSP 1 Score: 84.0 bits (206), Expect = 2.50e-16
Identity = 52/84 (61.90%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 25  LKLQSILRRSHILIASYLIQRREGNMTVLALRC----LSPCHHQL-----------ALDA 84
           L+L +  RR HILIASYL  RR+GNMTV  LRC    LS  +  L           ALDA
Sbjct: 35  LRLLNFSRRLHILIASYLTLRRKGNMTVQGLRCFLSSLSIIYFFLGSNVATVAFMHALDA 94

Query: 85  SGMDMEIDLSNLGTVNTMFAALFS 93
            GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 95  DGMDMEIDLSNLGTVNTMFAALFS 118

[Close]

BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: RZC03112.1 (Chaperone protein dnaJ 15 isoform C [Glycine soja])

HSP 1 Score: 71.6 bits (174), Expect = 6.08e-12
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 11  QVETYHPDKNGSNTLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDAS 70
           +VE   P+ +  N      IL+   ++   +L Q+REG+MTVL LRC +  +   ALDA 
Sbjct: 42  KVERKIPEDDPRNPAVRNIILKLGPLI---WLTQKREGSMTVLDLRCSTYTYQ--ALDAD 101

Query: 71  GMDMEIDLSNLGTVNTMFAALFS 93
            MDMEIDLSNLGTVNTMF ALFS
Sbjct: 102 SMDMEIDLSNLGTVNTMFTALFS 119

[Close]

BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: EXB77522.1 (Chaperone protein dnaJ 15 [Morus notabilis])

HSP 1 Score: 60.8 bits (146), Expect = 1.19e-08
Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 12 VETYHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDA 71
          ++ YHPDKN SN    +L   +  S+ +++    +RR+ + T              ALDA
Sbjct: 1  MDRYHPDKNASNPEASELFKEVAYSYSILSDP-EKRRQYDSTGFE-----------ALDA 60

Query: 72 SGMDMEIDLSNLGTVNTMFAALFS 93
           GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 61 EGMDMEIDLSNLGTVNTMFAALFS 72

[Close]

BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: XP_022152260.1 (chaperone protein dnaJ 15-like isoform X2 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 1.47e-08
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 15  YHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDASGMD 74
           YHPDKNGSN    +     ++   I S   +RR+ +                ALDASGMD
Sbjct: 45  YHPDKNGSNPEASELFKEVAYSYNILSDPEKRRQYDSAGFE-----------ALDASGMD 104

Query: 75  MEIDLSNLGTVNTMFAALFS 93
           MEIDLSNLGTVNTMFAALFS
Sbjct: 105 MEIDLSNLGTVNTMFAALFS 113

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL
Match: A0A445JX89 (H(+)-exporting diphosphatase OS=Glycine soja OX=3848 GN=D0Y65_017970 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.94e-12
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 11  QVETYHPDKNGSNTLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDAS 70
           +VE   P+ +  N      IL+   ++   +L Q+REG+MTVL LRC +  +   ALDA 
Sbjct: 42  KVERKIPEDDPRNPAVRNIILKLGPLI---WLTQKREGSMTVLDLRCSTYTYQ--ALDAD 101

Query: 71  GMDMEIDLSNLGTVNTMFAALFS 93
            MDMEIDLSNLGTVNTMF ALFS
Sbjct: 102 SMDMEIDLSNLGTVNTMFTALFS 119

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL
Match: A0A453EUJ7 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.28e-10
Identity = 40/70 (57.14%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 24 TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGMDMEIDLSNLGT 83
          T K QS  ++ HI   S  I R  GNM +L LR         AL+  GMDMEIDLSNLGT
Sbjct: 34 TQKHQSCSKKLHIRTVSCQILRNGGNMILLVLR---------ALENEGMDMEIDLSNLGT 93

Query: 84 VNTMFAALFS 93
          VNTMFAALFS
Sbjct: 94 VNTMFAALFS 94

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL
Match: A0A4D9B0N4 (Molecular chaperone DnaJ OS=Salvia splendens OX=180675 GN=dnaJ PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.28e-09
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGN-----MTVLALRCLSPCHHQLAL 74
           YHPDKN +N    +L   +  S+ ++A    +R+  N     M       +S      AL
Sbjct: 44  YHPDKNANNPEASELFKEVAYSYSILADPEKRRQYDNSGFEVMFQTGYLLISDIGDDKAL 103

Query: 75  DASGMDMEIDLSNLGTVNTMFAALFS 93
           DA GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DAEGMDMEIDLSNLGTVNTMFAALFS 129

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL
Match: A0A4D9BJA8 (Molecular chaperone DnaJ OS=Salvia splendens OX=180675 GN=dnaJ PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.08e-09
Identity = 41/89 (46.07%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTV--------LALRCLSPCHHQ 74
           YHPDKN +N    +L   +  S+ ++A    +R+  N           L +  +S     
Sbjct: 68  YHPDKNANNPEASELFKEVAYSYSILADPEKRRQYDNSGFEVMFQTGYLLISVVSDIGDD 127

Query: 75  LALDASGMDMEIDLSNLGTVNTMFAALFS 93
            ALDA GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 128 KALDAEGMDMEIDLSNLGTVNTMFAALFS 156

[Close]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL
Match: W9R9F6 (Chaperone protein dnaJ 15 OS=Morus notabilis OX=981085 GN=L484_015448 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.76e-09
Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 12 VETYHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDA 71
          ++ YHPDKN SN    +L   +  S+ +++    +RR+ + T              ALDA
Sbjct: 1  MDRYHPDKNASNPEASELFKEVAYSYSILSDP-EKRRQYDSTGFE-----------ALDA 60

Query: 72 SGMDMEIDLSNLGTVNTMFAALFS 93
           GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 61 EGMDMEIDLSNLGTVNTMFAALFS 72

[Close]

BLAST of Cp4.1LG01g18120 vs. TAIR 10
Match: AT1G68370.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.1e-09
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN +N    +L   +  S+ +++    +R   N                ALDA GM
Sbjct: 44  YHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGF------------EALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSY2	1.1e-07	46.91	Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g18120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_027365158.1	4.10e-18	72.46	chaperone protein dnaJ 15-like isoform X2 [Abrus precatorius]	[more]
KAG6707162.1	2.50e-16	61.90	hypothetical protein I3842_06G018300 [Carya illinoinensis]	[more]
RZC03112.1	6.08e-12	51.81	Chaperone protein dnaJ 15 isoform C [Glycine soja]	[more]
EXB77522.1	1.19e-08	47.62	Chaperone protein dnaJ 15 [Morus notabilis]	[more]
XP_022152260.1	1.47e-08	51.25	chaperone protein dnaJ 15-like isoform X2 [Momordica charantia]	[more]

BLAST of Cp4.1LG01g18120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445JX89	2.94e-12	51.81	H(+)-exporting diphosphatase OS=Glycine soja OX=3848 GN=D0Y65_017970 PE=3 SV=1	[more]
A0A453EUJ7	3.28e-10	57.14	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]
A0A4D9B0N4	2.28e-09	47.67	Molecular chaperone DnaJ OS=Salvia splendens OX=180675 GN=dnaJ PE=4 SV=1	[more]
A0A4D9BJA8	3.08e-09	46.07	Molecular chaperone DnaJ OS=Salvia splendens OX=180675 GN=dnaJ PE=4 SV=1	[more]
W9R9F6	5.76e-09	47.62	Chaperone protein dnaJ 15 OS=Morus notabilis OX=981085 GN=L484_015448 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g18120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68370.1	8.1e-09	46.91	Chaperone DnaJ-domain superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18120.1	Cp4.1LG01g18120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008233	peptidase activity