Cp4.1LG01g17740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Nudix hydrolase
Location	Cp4.1LG01: 12857633 .. 12858497 (-)
RNA-Seq Expression	Cp4.1LG01g17740
Synteny	Cp4.1LG01g17740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCGTTTGGTCCATAAAATAATTGGTAAAGGACATTCCTGTGAGCGTGCTGCCCAAGCCAAAAGAAAGTAAACCAATTACATAACTCCACGTTACACACTTTTCCCGAGGCTTTGTGACTATACGGCCCACAATTTATACCCTCCCAACATTGTGAAGGCTTGTGGTGGAAAGACCAAAAAAATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGTGAATCTCTCGTTTTTTGCTCACGCTTTTAATTTTGATTTAGTTTTAGAGATGGGTACCATTTTTTCTGAAAAGGGAAATTGCAGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCATGCCCTCTCTTGTGTTTAGTTTGTAATGCTTTACTTAATGTGAATCTGGTATCAAGCATACATAAATTGTTTTTCATTCATCTGCATATTTAAATAATAAATATAGCATAAAAATATAG

mRNA sequence

GTTTGCGTTTGGTCCATAAAATAATTGGTAAAGGACATTCCTGTGAGCGTGCTGCCCAAGCCAAAAGAAAGTAAACCAATTACATAACTCCACGTTACACACTTTTCCCGAGGCTTTGTGACTATACGGCCCACAATTTATACCCTCCCAACATTGTGAAGGCTTGTGGTGGAAAGACCAAAAAAATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCATGCCCTCTCTTGTGTTTAGTTTGTAATGCTTTACTTAATGTGAATCTGGTATCAAGCATACATAAATTGTTTTTCATTCATCTGCATATTTAAATAATAAATATAGCATAAAAATATAG

Coding sequence (CDS)

ATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGA

Protein sequence

MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

Homology

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot
Match: Q9CA40 (Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-53
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETGL
Sbjct: 7   IPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETGL 66

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
            IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++LP
Sbjct: 67  KIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLP 126

Query: 126 SPLFWPLEKMVKSGFNPF 144
            PLFWPLEK+  SGFNPF
Sbjct: 127 KPLFWPLEKLFGSGFNPF 141

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot
Match: M4I1C6 (Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-51
Identity = 92/137 (67.15%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 8   RVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDI 67
           +V VVV +L+G++VLLGRR SS GDS   TF+LP GHLEFGESFEEC  RE+KEET LDI
Sbjct: 16  KVAVVVCLLRGQNVLLGRRRSSLGDS---TFSLPSGHLEFGESFEECAARELKEETDLDI 75

Query: 68  EKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSP 127
            K E LTVTNN F+++ KPS YV +FMRAVL+DP Q+PQN+EP  C GW WY+WD+LP P
Sbjct: 76  GKIELLTVTNNLFLDEAKPSQYVAVFMRAVLADPRQEPQNIEPEFCDGWGWYEWDNLPKP 135

Query: 128 LFWPLEKMVKSGFNPFP 145
           LFWPL+ +V+ GFNPFP
Sbjct: 136 LFWPLDNVVQDGFNPFP 149

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot
Match: Q8BG93 (Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 7   PRVGVVVYILK---GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEET 66
           P VGV V +L     + VLLG+R  S G  S   F LPGGHLEFGE++EEC  RE  EE 
Sbjct: 11  PGVGVGVVVLSCEHPRCVLLGKRKGSFGAGS---FQLPGGHLEFGETWEECAQRETWEEA 70

Query: 67  GLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA-VLSDPLQQPQNLEPSKCGGWDWYDWD 126
           GL ++   F +V N+ FV + +  HYV I M+  V      +P+N+EP K   W+W  W+
Sbjct: 71  GLHLKNVCFASVVNS-FV-EKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWE 130

Query: 127 DLP--SPLFWPLEKMVKSGFNPF 144
           + P    LFW L  + + G++PF
Sbjct: 131 EFPPLDQLFWALRCLKEQGYDPF 148

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot
Match: Q9NV35 (Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-21
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 9   VGVVVYILK-GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDI 68
           VGVVV   K  + VLLG+R  S G  S   F LPGGHLEFGE++EEC  RE  EE  L +
Sbjct: 16  VGVVVTSCKHPRCVLLGKRKGSVGAGS---FQLPGGHLEFGETWEECAQRETWEEAALHL 75

Query: 69  EKTEFLTVTNNPFVNDPKPSHYVVIFMRA---VLSDPLQQPQNLEPSKCGGWDWYDWDDL 128
           +   F +V N+ F+ + +  HYV I M+    V  D   +P+N+EP K   W+W  W++L
Sbjct: 76  KNVHFASVVNS-FI-EKENYHYVTILMKGEVDVTHD--SEPKNVEPEKNESWEWVPWEEL 135

Query: 129 P--SPLFWPLEKMVKSGFNPF 144
           P    LFW L  + + G++PF
Sbjct: 136 PPLDQLFWGLRCLKEQGYDPF 149

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot
Match: Q58549 (ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=nudF PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-08
Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 7   PRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLD 66
           P V V   I K   +LL +R     +     FALPGG +E GE+ EE  VRE+KEETGL 
Sbjct: 41  PAVAVDGIIEKDNKILLIKR---KNNPFKGCFALPGGFVECGETVEEAVVREIKEETGLI 100

Query: 67  IEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPS 126
            +    L V ++P   DP+     ++F+  V+   L+   + + +     +++D ++LP 
Sbjct: 101 PKVKSLLGVYSSP-DRDPRGHVISIVFILDVIGGELKAGDDAKEA-----EFFDLNNLPK 160

Query: 127 PLFWPLEKMVK 138
            L +  EK++K
Sbjct: 161 -LAFDHEKIIK 161

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: XP_023550111.1 (nudix hydrolase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311 bits (797), Expect = 3.33e-107
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK
Sbjct: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD
Sbjct: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 145
           WDDLPSPLFWPLEKMVKSGFNPFPV
Sbjct: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 145

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: XP_022974207.1 (nudix hydrolase 1-like [Cucurbita maxima])

HSP 1 Score: 301 bits (772), Expect = 2.17e-103
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           ME  PVPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF+ECGVREVK
Sbjct: 1   MEKTPVPRVGVAVYILKGNSVLLGRRLSSSGDSSHATFALPGGHLEFGESFDECGVREVK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD
Sbjct: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 145
           WDDLPSPLFWPLEKM+KSGFNPFPV
Sbjct: 121 WDDLPSPLFWPLEKMIKSGFNPFPV 145

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: KAG6601762.1 (Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301 bits (772), Expect = 2.67e-103
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG
Sbjct: 11  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL
Sbjct: 71  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 145
           PSPLFWPLEKMVKSGFNPFPV
Sbjct: 131 PSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: KAG7032485.1 (Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300 bits (769), Expect = 7.65e-103
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+CGVREVKEETG
Sbjct: 11  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL
Sbjct: 71  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 145
           PSPLFWPLEKMVKSGFNPFPV
Sbjct: 131 PSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: XP_022930097.1 (nudix hydrolase 1-like [Cucurbita moschata])

HSP 1 Score: 297 bits (761), Expect = 1.27e-101
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL
Sbjct: 12  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 71

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
           DIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP
Sbjct: 72  DIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 131

Query: 126 SPLFWPLEKMVKSGFNPFPV 145
           SPLFWPLEKMVKSGFNPFPV
Sbjct: 132 SPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL
Match: A0A6J1I9N4 (nudix hydrolase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472824 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.05e-103
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           ME  PVPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF+ECGVREVK
Sbjct: 1   MEKTPVPRVGVAVYILKGNSVLLGRRLSSSGDSSHATFALPGGHLEFGESFDECGVREVK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD
Sbjct: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 145
           WDDLPSPLFWPLEKM+KSGFNPFPV
Sbjct: 121 WDDLPSPLFWPLEKMIKSGFNPFPV 145

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL
Match: A0A6J1EPE6 (nudix hydrolase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436581 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 6.15e-102
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL
Sbjct: 12  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 71

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
           DIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP
Sbjct: 72  DIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 131

Query: 126 SPLFWPLEKMVKSGFNPFPV 145
           SPLFWPLEKMVKSGFNPFPV
Sbjct: 132 SPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL
Match: A0A6J1DTS6 (nudix hydrolase 1-like OS=Momordica charantia OX=3673 GN=LOC111023417 PE=3 SV=1)

HSP 1 Score: 271 bits (693), Expect = 9.09e-91
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKG SVLLGRRLSS+GDSSH+TFALPGGHLEFGE+F+EC VREVKEETG
Sbjct: 65  PVPRVAVVVYILKGNSVLLGRRLSSAGDSSHSTFALPGGHLEFGEAFDECAVREVKEETG 124

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTNNPF+NDPKPSHYV IFMRA LSD  QQPQNLEPSKCGGWDWYDW  L
Sbjct: 125 LDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRADLSDAQQQPQNLEPSKCGGWDWYDWSHL 184

Query: 125 PSPLFWPLEKMVKSGFNPFPV 145
           P+PLFWPL+KMV+SGFNPFPV
Sbjct: 185 PNPLFWPLDKMVRSGFNPFPV 205

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL
Match: A0A5D3BLX3 (Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00150 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 3.40e-90
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFEEC VREVKEETG
Sbjct: 11  PVPRVAVVVYILKGKSVLMGRRLSSAGDSGHFTFALPGGHLEFGESFEECAVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTN PF+NDPKPSHYV I MRAVLSDP Q PQNLEP+KC GWDWYDWD L
Sbjct: 71  LDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPQNLEPNKCSGWDWYDWDHL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 145
           P+PLFWP+EKMV+SGFNPFPV
Sbjct: 131 PNPLFWPMEKMVRSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL
Match: A0A1S3CT01 (nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103504605 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 3.40e-90
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFEEC VREVKEETG
Sbjct: 11  PVPRVAVVVYILKGKSVLMGRRLSSAGDSGHFTFALPGGHLEFGESFEECAVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTN PF+NDPKPSHYV I MRAVLSDP Q PQNLEP+KC GWDWYDWD L
Sbjct: 71  LDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPQNLEPNKCSGWDWYDWDHL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 145
           P+PLFWP+EKMV+SGFNPFPV
Sbjct: 131 PNPLFWPMEKMVRSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. TAIR 10
Match: AT1G68760.1 (nudix hydrolase 1 )

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-54
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETGL
Sbjct: 7   IPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETGL 66

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
            IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++LP
Sbjct: 67  KIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLP 126

Query: 126 SPLFWPLEKMVKSGFNPF 144
            PLFWPLEK+  SGFNPF
Sbjct: 127 KPLFWPLEKLFGSGFNPF 141

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BLAST of Cp4.1LG01g17740 vs. TAIR 10
Match: AT5G47650.1 (nudix hydrolase homolog 2 )

HSP 1 Score: 42.7 bits (99), Expect = 2.9e-04
Identity = 29/120 (24.17%), Postives = 48/120 (40.00%), Query Frame = 0


Query: 4   NPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEET 63
           N   RVG+  +++     +L  +  +        +  P G +  GE   +  VREVKEET
Sbjct: 108 NASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEET 167

Query: 64  GLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDD 123
           G+D E  + L           K   + V  ++     PL    N + S+     W  W++
Sbjct: 168 GVDTEFDQILAFRQTHKAFFGKSDLFFVCMLK-----PLSLEINAQESEIEAAQWMPWEE 222

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA40	2.5e-53	70.29	Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1	[more]
M4I1C6	2.3e-51	67.15	Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1...	[more]
Q8BG93	1.5e-21	42.66	Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 ...	[more]
Q9NV35	3.3e-21	43.26	Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 P...	[more]
Q58549	9.2e-08	32.82	ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 /...	[more]

BLAST of Cp4.1LG01g17740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550111.1	3.33e-107	100.00	nudix hydrolase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974207.1	2.17e-103	95.86	nudix hydrolase 1-like [Cucurbita maxima]	[more]
KAG6601762.1	2.67e-103	100.00	Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032485.1	7.65e-103	99.29	Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022930097.1	1.27e-101	99.29	nudix hydrolase 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g17740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I9N4	1.05e-103	95.86	nudix hydrolase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472824 PE=4 SV=1	[more]
A0A6J1EPE6	6.15e-102	99.29	nudix hydrolase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436581 PE=4 SV=1	[more]
A0A6J1DTS6	9.09e-91	87.94	nudix hydrolase 1-like OS=Momordica charantia OX=3673 GN=LOC111023417 PE=3 SV=1	[more]
A0A5D3BLX3	3.40e-90	87.23	Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3CT01	3.40e-90	87.23	nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103504605 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g17740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68760.1	1.8e-54	70.29	nudix hydrolase 1	[more]
AT5G47650.1	2.9e-04	24.17	nudix hydrolase homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 38..52 score: 43.51 coord: 52..67 score: 47.33
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 1..144 e-value: 3.2E-48 score: 165.0
None	No IPR available	PANTHER	PTHR16099	8-OXO-DGTP DIPHOSPHATES NUDT15	coord: 2..144
None	No IPR available	CDD	cd04678	Nudix_Hydrolase_19	coord: 7..134 e-value: 1.1333E-58 score: 176.298
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 8..131 e-value: 2.5E-19 score: 69.6
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 6..142 score: 16.414576
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 4..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17740.1	Cp4.1LG01g17740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0006203	dGTP catabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0035539	8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0008413	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0019177	dihydroneopterin triphosphate pyrophosphohydrolase activity