Cp4.1LG01g17550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cp4.1LG01: 13495230 .. 13495760 (-)
RNA-Seq Expression	Cp4.1LG01g17550
Synteny	Cp4.1LG01g17550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACTGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTACACCATGATTCATTCAATCAGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGCAACTATGATCCTCCATACAACTATATTGGGGAAAAGCTTTATGATTCTTGGGTGGTAGGAAGAGATGTGGTTTTAAAAATTTTATAA

mRNA sequence

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACTGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTACACCATGATTCATTCAATCAGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGCAACTATGATCCTCCATACAACTATATTGGGGAAAAGCTTTATGATTCTTGGGTGGTAGGAAGAGATGTGGTTTTAAAAATTTTATAA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGGTGACTACCTCGCACTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACTGTGGCCGCATACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTACACCATGATTCATTCAATCAGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGCAACTATGATCCTCCATACAACTATATTGGGGAAAAGCTTTATGATTCTTGGGTGGTAGGAAGAGATGTGGTTTTAAAAATTTTATAA

Protein sequence

MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL

Homology

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BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-46
Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 6   LPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKR 65
           L  + A   TF  L+  + AQN+P DYL  HN AR QVGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHYTQMV 125
            GD  MIHS   YGEN+AA  +P+   A AVK+W ++K  YD+ SN CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEK 161
           WR+SVRLGCARV       F+ CNYDPP N+IG++
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQR 157

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 11  AFMATFIFLLAL---TNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
           + + T + +LA+     AQN+P DYLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGE-CGHYTQMVW 130
           D  +IHS    GEN+A G   +FTG  AV+LW +++P Y++A+N+CVGG+ CGHYTQ+VW
Sbjct: 67  DCNLIHS--GAGENLAKG-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 126

Query: 131 RSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           R+SVRLGC R  C     F+ CNYDP  N++GE+ Y
Sbjct: 127 RNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-39
Identity = 81/156 (51.92%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 11  AFMATFIFLLAL---TNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
           + + T + +LA+     AQN+P DYLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGG-ECGHYTQMVW 130
           D  +IHS    GEN+A G   +FTG  AV+LW +++P Y++A+N+CVGG +C HYTQ+VW
Sbjct: 67  DCNLIHS--GAGENLAKG-GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVW 126

Query: 131 RSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           R+SVRLGC R  C     F+ CNYDP  N+IG++ Y
Sbjct: 127 RNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 159

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-39
Identity = 77/156 (49.36%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 8   IMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 67
           ++ + +  F+ +     AQN+  DYL  HN ARA VGV P+ W + VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGE-CGHYTQMVW 127
           D  ++HS   YGEN+A G     T A AV++W ++K  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           R+SVR+GCARV C      V CNYDPP NY GE  Y
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-39
Identity = 77/154 (50.00%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 9   MAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  YTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHYTQMVWRS 128
             +IHS   YGEN+A G   + +G  AV +W ++K  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           SVRLGCA+V C      + CNYDP  NY+ EK Y
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG01g17550 vs. NCBI nr
Match: XP_023535981.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372 bits (956), Expect = 1.97e-130
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176

[Close]

BLAST of Cp4.1LG01g17550 vs. NCBI nr
Match: XP_022958939.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 335 bits (860), Expect = 8.61e-116
Identity = 159/176 (90.34%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF FLLALTNAQNAP DYLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS   YGENIAAGYYPEFTGADAVKLW N+KPLYDHA NKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV RD+VLKIL
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVVRRDLVLKIL 176

[Close]

BLAST of Cp4.1LG01g17550 vs. NCBI nr
Match: XP_022971799.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 334 bits (856), Expect = 3.51e-115
Identity = 157/176 (89.20%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMA F+ATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQA
Sbjct: 1   MWTQTLPIMAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YA+KRKGD  MIHS   YGENIAAGYYPEFTGA+AVKLWAN+KPLYDHASNKC+GGECGH
Sbjct: 61  YAKKRKGDSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV RD+VLKIL
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVVQRDLVLKIL 176

[Close]

BLAST of Cp4.1LG01g17550 vs. NCBI nr
Match: XP_023521428.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330 bits (845), Expect = 1.22e-113
Identity = 156/167 (93.41%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MW QTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWAQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS   YGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVV 167
           YT MVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV
Sbjct: 121 YTHMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of Cp4.1LG01g17550 vs. NCBI nr
Match: XP_023538576.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 1.00e-112
Identity = 156/167 (93.41%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFIFLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS   YGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVV 167
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL
Match: A0A6J1H6J8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460079 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 4.17e-116
Identity = 159/176 (90.34%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF FLLALTNAQNAP DYLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS   YGENIAAGYYPEFTGADAVKLW N+KPLYDHA NKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV RD+VLKIL
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVVRRDLVLKIL 176

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL
Match: A0A6J1I9K6 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470478 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 1.70e-115
Identity = 157/176 (89.20%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMA F+ATF+FLL LTNAQNAPGDYL LHNRARAQVGVGPMQWS TVAAYAQA
Sbjct: 1   MWTQTLPIMAVFIATFMFLLVLTNAQNAPGDYLVLHNRARAQVGVGPMQWSKTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YA+KRKGD  MIHS   YGENIAAGYYPEFTGA+AVKLWAN+KPLYDHASNKC+GGECGH
Sbjct: 61  YAKKRKGDSAMIHSTGPYGENIAAGYYPEFTGANAVKLWANEKPLYDHASNKCLGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVVGRDVVLKIL 176
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV RD+VLKIL
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVVQRDLVLKIL 176

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL
Match: A0A6J1H4L4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460100 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 6.88e-113
Identity = 155/167 (92.81%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATFIFLLALTNAQNA GDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS  SYGENIAAGYYPEFTGADAVKLW N+KPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVV 167
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 9.78e-113
Identity = 155/167 (92.81%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTL IMAAFM TFIFLLALT AQNAPGDYLALHNRARA+VGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGH 120
           YAEKRKGD  MIHS   YGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVV 167
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 327 bits (839), Expect = 1.43e-112
Identity = 154/166 (92.77%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           WTQTLPIM AF+ATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 62  AEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHY 121
           A+KRKGD  MIHS   YGENIAAGYYPEFTGADAVKLW N+KPLYDHASNKCVGGECGHY
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

Query: 122 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLYDSWVV 167
           TQMVWRSSVRLGCARVPCKANSQFVVCNYDPP NYIGEK YDSWVV
Sbjct: 153 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]

BLAST of Cp4.1LG01g17550 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 16  FIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDYTMIHSI 75
           F+ L+    AQ++P D+LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGD  M HS 
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  RSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCV-GGECGHYTQMVWRSSVRLGC 135
            SYGENIA       TG  AV +W +++  YD+ SN C    +CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 136 ARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           A+V C     F+ CNYDPP N++GE  Y
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG01g17550 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 4.6e-41
Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 18  FLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDYTMIHSIRS 77
           FL+  TNAQN P DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK D  ++HS   
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 78  YGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGG-ECGHYTQMVWRSSVRLGCAR 137
           YGEN+A G    F+   AVKLW ++KP Y +A N C GG +C HYTQ+VWR SV++GCAR
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

Query: 138 VPCKANSQFVVCNYDPPYNYIGEKLY 163
           V C     FV CNY+ P N++GE  Y
Sbjct: 136 VQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Cp4.1LG01g17550 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 162.2 bits (409), Expect = 3.9e-40
Identity = 77/154 (50.00%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 9   MAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++P DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  YTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHYTQMVWRS 128
             +IHS   YGEN+A G   + +G  AV +W ++K  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           SVRLGCA+V C      + CNYDP  NY+ EK Y
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG01g17550 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 76/161 (47.20%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           +++ L I+AA +   +  L    AQ++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDYTMIHSIRSYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVGGECGHY 121
           A + KGD  ++HS   YGEN+A     + +G  AV LW N+K  Y++ +N C  G CGHY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 122 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPYNYIGEKLY 163
           TQ+VWR+SVRLGCA+V C      + CNYDPP NY  +K Y
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG01g17550 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 155.2 bits (391), Expect = 4.8e-38
Identity = 75/144 (52.08%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 21  ALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDYTMIHSIRSYGE 80
           A  N    P + L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  D  M HS+  +GE
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 81  NIAAGYYPEFTGADAVKLWANKKPLYDHASNKCVG-GECGHYTQMVWRSSVRLGCARVPC 140
           N+AAG +   +G  A + W  +K  YD+ SN C G G CGHYTQ+VWR SVRLGCA V C
Sbjct: 94  NLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRC 153

Query: 141 KANSQ-FVVCNYDPPYNYIGEKLY 163
           K +   +V+C+YDPP NYIG++ Y
Sbjct: 154 KNDEYIWVICSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	7.9e-46	56.77	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q04108	3.8e-40	52.56	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P04284	3.2e-39	51.92	Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=...	[more]
P08299	5.5e-39	49.36	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P33154	5.5e-39	50.00	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]

BLAST of Cp4.1LG01g17550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535981.1	1.97e-130	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958939.1	8.61e-116	90.34	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022971799.1	3.51e-115	89.20	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_023521428.1	1.22e-113	93.41	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023538576.1	1.00e-112	93.41	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG01g17550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6J8	4.17e-116	90.34	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I9K6	1.70e-115	89.20	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1H4L4	6.88e-113	92.81	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I475	9.78e-113	92.81	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1H3H8	1.43e-112	92.77	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Cp4.1LG01g17550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	2.1e-41	53.38	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	4.6e-41	53.42	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	3.9e-40	50.00	pathogenesis-related gene 1	[more]
AT2G14580.1	1.6e-38	47.20	basic pathogenesis-related protein 1	[more]
AT2G19990.1	4.8e-38	52.08	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 95..108 score: 31.43 coord: 118..134 score: 63.28 coord: 48..66 score: 36.79 coord: 145..158 score: 50.98
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..162
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 48..66 score: 27.63 coord: 93..108 score: 24.22 coord: 117..136 score: 49.69
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 5.9E-49 score: 178.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 5.4E-22 score: 79.0
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 28..162 e-value: 1.3E-40 score: 140.8
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 22..163
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 19..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..162 e-value: 1.15652E-72 score: 213.264
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17550.1	Cp4.1LG01g17550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane