Cp4.1LG01g14360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g14360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	R3H domain-containing protein 2-like
Location	Cp4.1LG01: 7694051 .. 7699120 (+)
RNA-Seq Expression	Cp4.1LG01g14360
Synteny	Cp4.1LG01g14360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCGCAGGCACGCAACCTTTGACATGGTCTGAAACCATTCAACCTTTTCATCATCAAAGCGAATCGTACCCGTCGCCAAATTCTCTCTACACTCTCTTCTGATTTTTCTTCTTCCGCCTCCGTCACGGTGGTCGAAAGTCGAAACCCTAATCTCTAAATGCAATTCCGATCCCGAAATTCGCCTGCTACCTCGATCTCCTGTTTGGGGGCCTTTATTCTCTGATATTTCATGACTCACTTTGTGGCAGGACTTTAGTGTTCTCCTCTTTCGTCTCCCCATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTTTCATCCGCTTCATTTCCCTCTCTTCCCTCCTCGGTTTCTTCTACCATCGAGAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGCATAACCCTCGGGAGCGTCTATCAAGTAAGTCGTTTATTTAGCTTTCCTGTATTATGGATTGCTTTCGGTGAAAAGTTGCAGGATACGGCCATCTCGAATTTTGTGGAAAATCAATACTGTGGAACCTATGCTTAGAAAGAAAAATAGAATGTGTTTTAGTGTCAAAGACCAACTATGACAAGTTAAATTAGGAATCTAAAATGGTTTCAAGCCACATATAGAATTAAGTAATTTAATGTCAGAAAATCTATGGCCAGGTAGCTGCTTCATTGAGCTGGAATATCTTGGGTGCTTTGATAAAAGGGATAGATTTTGTGGCTTAATGCACTATAAGCTTTCATCTGGGGTGACAATGAGCAGAAAGACAAGGGGGCTATTTAAAGGAAAATGGTTTTGGGAAAGGCTCTTAGATTTAGATGAATTTCATTCCTCTGGTTGGTCTGCGCTTTCCAATTCCATTTATAATTATACTCCATCTCTATCAAATCAAAGTGGAGTCAGTTTTGTTACTCATAATTTATGGGCACTGTTTATATTGTTGAAAACATGGTGTTTACGATTTATACCCCTTGACGGATGATATTGAATATTTATCATTGCTTTAGTTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAACTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTTGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATGGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACGGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGCATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATGCAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTACGGAATGCAATCATTTTTTTCTTGGCCTGATCTTAATTTTTTTCAATTGTCTGCTTCTTTTGGTAGGAGATGGATGACCAGGTTTTTGAATAGATCTAAAGCTTCCCATTTATTCTCTCTTGACCTCTTTACCGTGTTTCTTTTGAGATAAACAATTTGAATTAAATACATTTTATTATTAATTGGTGACAGTTAGGGTTCTCTAAATTTTTTTTGAGGATTAATCGTGTGCAAACATTTATTACAGAACATAACTTTTTATGATACACAAAGTAAGGTATTTTCAAGTCATGAATCAACTGCTAGACGATGAAGTAACAAGCTGTTAATTGACAAGCGTGACTTTCCTATTTAGAAATTTTAACATCAGAGGTGCATCCTGACTTTTATTGTTGGGATAGTAATTTAGCCAAATTTCTGGTTGTAAAATCCTTCTTCAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACCGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCTCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGGTTTGGACTTTTCATCTGTTTTATTGAATTTGAATTTTTGGTGCAACAAACTTTTTATTCCAAAGCTCTTCTCTTTCTTGGATATTTGTGCTGGTGATATTTCATCAGTAGCTATCCTACCGCTTGTAAGTGACCACCCCACTGGACGTATAACTCTACGAATCTTCTTGCAAGTGATTGCAGTTATAAGTCTAAAAAGGGCAGTTTGTCTTTAAGTACGCACAAAAGGAAACTAAAGAGAAACTTAGTCGAGCAAAGTTTCCTTTTGTGCGTACTTAAAGACAATGTAGCAGAGTGTGTTCTTTTTCACTCACACACCATTTTGATCCTGATCTTATGATTTTGCAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGGTGAGGGGCATGGGCCATGCCTGCTCCCTGCCATCTGGTAGTTAAAATATATCGTGGGCTTTTCAGTGCACATTTATTTACTTGAAATGGCAGGGGGCAGGCATAAAGAACTGATGTGGGCATAGAAGAAGGATTTACATTTTCTGGGACTTGATATGCTTCTTCCCACCATCAGTTTCCTGGGAGCTTCTTGCATCTCTTATGGTTGATGAAGAAACTCATTGCTTTGGAATTTGCGCTAGTAGGCTGAGCTGTTCAGGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATAGAAGAATCAACAATCTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGGTATGGGATTCTTTTAACGTTATATTAACTACCACCCTGCCTACCCAACCCGCTCACTCTCTCTAAGTTGAACTTAAAAGAAACGTGATAAAATGAGAACGGGGGTAAAAAAAGTGTCATTCTGTAATATTTGTTGGCTTTTTGTCTGTGCATATAGTTGTAAGCATTAACAAAGAATTGTCATTTTCTCTGGTTCTGTAGTTGTTCTAACTTTCTAAGGTTACAGTCAATGGAAGGTGAGATTATTGTTGAAAGGATGTTGGAGGCTGTTGATTCTGAACTAGGGGATTTCTTCATTTCATGTTTGGTCTCCACAATCCTGCACTTTGCACTGTCGTACGTGACTTTTAGATGACCATCTGTTCGTGTTTTTGATAGTCCTAAATGGATATTCCGTAAGCTATATGACATGGAAAATTCTGTTGGTCTCTAATTTTTAATGATTTTCTTCTATGGCATAGCCATCCTGGCCTATCATCATCATATCTCTAGACCAGGAATCATTTGCATTTTTCCTGAGATTTCTTTTGTGTCATGGATGATTGGTTTAATATCTTGTTGAGTGTTCATGACTGGTTTAATATCTTCTTGGAGTATTCTTTTGTTTGGCTTCTCATCTACCATGAGGTTTTGTTCCAGTTCTTCAGTTATTTTGTCGACATTTTCAGCATACGGGAGGATATGGTTTTTCGTCATTGCAAAACTAGAGCTGTGCTTGTAAGAATGCCAAAAATTTGGTGAAATGGAATGTCATGGAAGAAAGATCAGTCACACAACCCAGAGAAGATCAAACATGGGAAAAATGTTCGGATCAAGTGACATCCGTTGCTGCAGCTCGAGTACCAGTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTGTAAGTGCTCCGATTAGTTTTGATTTCATTTTAATGATGCTACCACCAGGGAAGATCCTTAAAATTAACAACACTTGATGCCTTCTTGTTGCAAGGACAAAGAAGGATTCGTGGGACGGAAAGCGTGTTTCATTTCCTGATCATCTTTAGCAGTTCGAGCAAATCTGGGAATCAGCTACACATGGGATCGAGTGACAATTTCACCCTTGATGGGCAGGTATGAAATCTTTAGAAACGCAGCCTCTGTCTGCGTCGAGCTTTGATGAAAAATGGAGGGTGCTCTTCAAGTTCGTACTTTGAATGTAAGTTGAGGTATATGCCTCAACCAGCTTACGGCATACACCATATCTTCAGCTTCTCTTAGCCTGAAGAATCTCGGTATTATTACTTCAACACCTTTCTATATTTTGTTTAATATAATTTTAGACTGATTGTATATGATGAATGTTAATTATAGGTTTTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCTTCAATTTTCTTTCTGATTTTTTGAAAAGATCATTGAAATTTTGTTTATTCAAGTGCTTTTCCCTTGGTTTGGCCCACACCCCACTTGTTGAACATCCAAAAAAAGGCTCCAAATGTGGCAGTTTTTAAGCTTCAAATAGGGTATTAGTTAGTCATCTTAGTGTCAAAACAATGTGACAAAGGAAAGTCGATAATAAATATTTCCCCTTTTAAGAATTCTTTATGAAACTGGAACTCCTT

mRNA sequence

CGTCGCAGGCACGCAACCTTTGACATGGTCTGAAACCATTCAACCTTTTCATCATCAAAGCGAATCGTACCCGTCGCCAAATTCTCTCTACACTCTCTTCTGATTTTTCTTCTTCCGCCTCCGTCACGGTGGTCGAAAGTCGAAACCCTAATCTCTAAATGCAATTCCGATCCCGAAATTCGCCTGCTACCTCGATCTCCTGTTTGGGGGCCTTTATTCTCTGATATTTCATGACTCACTTTGTGGCAGGACTTTAGTGTTCTCCTCTTTCGTCTCCCCATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTTTCATCCGCTTCATTTCCCTCTCTTCCCTCCTCGGTTTCTTCTACCATCGAGAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGCATAACCCTCGGGAGCGTCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAACTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTTGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATGGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACGGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGCATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATGCAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACCGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCTCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGGTGAGGGGCATGGGCCATGCCTGCTCCCTGCCATCTGGTAGTTAAAATATATCGTGGGCTTTTCAGTGCACATTTATTTACTTGAAATGGCAGGGGGCAGGCATAAAGAACTGATGTGGGCATAGAAGAAGGATTTACATTTTCTGGGACTTGATATGCTTCTTCCCACCATCAGTTTCCTGGGAGCTTCTTGCATCTCTTATGGTTGATGAAGAAACTCATTGCTTTGGAATTTGCGCTAGTAGGCTGAGCTGTTCAGGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATAGAAGAATCAACAATCTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGTTCTTCAGTTATTTTGTCGACATTTTCAGCATACGGGAGGATATGGTTTTTCGTCATTGCAAAACTAGAGCTGTGCTTGTAAGAATGCCAAAAATTTGGTGAAATGGAATGTCATGGAAGAAAGATCAGTCACACAACCCAGAGAAGATCAAACATGGGAAAAATGTTCGGATCAAGTGACATCCGTTGCTGCAGCTCGAGTACCAGTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTGACAAAGAAGGATTCGTGGGACGGAAAGCGTGTTTCATTTCCTGATCATCTTTAGCAGTTCGAGCAAATCTGGGAATCAGCTACACATGGGATCGAGTGACAATTTCACCCTTGATGGGCAGGTATGAAATCTTTAGAAACGCAGCCTCTGTCTGCGTCGAGCTTTGATGAAAAATGGAGGGTGCTCTTCAAGTTCGTACTTTGAATGTAAGTTGAGGTATATGCCTCAACCAGCTTACGGCATACACCATATCTTCAGCTTCTCTTAGCCTGAAGAATCTCGGTTTTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCTTCAATTTTCTTTCTGATTTTTTGAAAAGATCATTGAAATTTTGTTTATTCAAGTGCTTTTCCCTTGGTTTGGCCCACACCCCACTTGTTGAACATCCAAAAAAAGGCTCCAAATGTGGCAGTTTTTAAGCTTCAAATAGGGTATTAGTTAGTCATCTTAGTGTCAAAACAATGTGACAAAGGAAAGTCGATAATAAATATTTCCCCTTTTAAGAATTCTTTATGAAACTGGAACTCCTT

Coding sequence (CDS)

ATGGAGGGCTCTGCGGTTGAGGATCTCGGAGCACCGGAGTCATGGGAGGTCGCGAATTTGGACGAGGCCATGAGCCGATTGATGCTCCCCTCTTCGTCTCCTACGAAGAATTCCAAATCATTGGATAACTCTTTTGACGATGCTGCTCCAGCTTCTCATTTTTCATCCGCTTCATTTCCCTCTCTTCCCTCCTCGGTTTCTTCTACCATCGAGAGGGTTCCCGAGGATGTTGTCAATCAGGTTGATCAGTTCCTTCTCGAGGCTTTGCATAACCCTCGGGAGCGTCTATCAATTTTGCGCATGGAGCAAGATGTTGAGAAATTTATCCGGGATCCTGCTCGACAACAACTAGAGTTCCAGCAGTTGCCTACTTCATATTTACGGCTAGCTGCCCATCGGGTTGCCCAACATTATTCACTGCAGTCCATGGTTCTATTGGACAATGGTTTACCTGATGGATCTGGTTCCAAAATTATTGTTAGTAAGACTTCTGAATGCCGTCTTCCAGCTATCCGCCTTGCAGATATTCCCGTAAATCTTCCAACGGAGGAAAATAGTACCATGAAGGTTGCTATCAAACAGAGGCCACAGAAACGGTCTCAAGTAGCTAAAGATGCCAGTGCCAATTCATCGAAAACAAGTGGCTCCAAAAGTGTGGAAGAAAGGAAGGAGGAGTATAATAAAGCTCGTGCTCGCATATTCAATTGCAGCAGTAATTCAGGTAGTCATGCAGGTGTGAAAGTAGATGCCGATCCTAGACTACAGGATAGTTATCGTGGTTCCTTGGGTGCTGCAAAGGTTGAGGAGAAGATGATTTCAGGAGTTCCTGATGCAAATTTTAGTAGGGGCTTGATTGACTGTTCTACGAGTAGCAGTAGAATAAGTAGAAGTAGGACTGACAAGGAGCTTCCTATAAGGCAGGTGCACAAACCAAATAGTAGGGTAGCCATTTTTAGAGATCGTGAGATCGATATCAAGGATCCTGATTATGACAGGAGCTATGATAGGTATATGCAGAGATTCGACCCTGGGTTTGGCTTCAGTGGCGGCCCATACACCGTGCAGCCCATGTATGCTCCTGCAGTGAACTACAACACTGAATTTCCACAACTTGGCTCTGCTCATAGACAGGCTGTTTCAGAATGTCAGCCTAGACCACTCTCTTCCCACGTACCTGGGCCATGGAATGCCCAATCATCTCCTGCAGGTTTGGGGTATGGTCATCGAGAAGCAATGGTTAGACCTTTTAATCCAAATGTCGATGCGCATTCATCTTCTGGTGTATATCTGCATTCCTCTCAGTATCCCGGTCAGCAGTCTGGAATGCATTTTATCCATCCTCATGAACAAACTTATCAACCTTTTACACAGCAATACCAACAGCAACCAGATGCAGGTTTTGGTTTAGCACGGCCCCGGTGA

Protein sequence

MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFPSLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR

Homology

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BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot
Match: Q80TM6 (R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 5.9e-11
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 83  QFLLEAL-HNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L  NPR+R+ +L++EQ++  FI D   Q  +F Q+ TSY R+  HRVA ++ + 
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQFKKFPQM-TSYHRMLLHRVAAYFGMD 215

Query: 143 SMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R ++   ++  E+N+  +   ++   KR  
Sbjct: 216 HNV-------DQTGKAVIINKTSSTRIPEQRFSE---HIKDEKNTEFQ---QRFILKRDD 275

Query: 203 VAKDASANSSKT-----SGSKSVEERKEEYNKARARIF 235
            + D   N  +        SKS+EER+EEY + R RIF
Sbjct: 276 ASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIF 299

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot
Match: A0JNC2 (R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-11
Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 83  QFLLEAL-HNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L  NPR+R+ +L++EQ++  FI D   Q  +F Q+ TSY R+  HRVA ++ + 
Sbjct: 156 EFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQFKKFPQM-TSYHRMLLHRVAAYFGMD 215

Query: 143 SMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R ++   ++  E+N+  +   ++   KR  
Sbjct: 216 HNV-------DQTGKAVIINKTSNTRIPEQRFSE---HIKDEKNTEFQ---QRFILKRDD 275

Query: 203 VAKDASANSSKT-----SGSKSVEERKEEYNKARARIF 235
            + D   N  +        SKS+EER+EEY + R RIF
Sbjct: 276 ASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIF 299

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot
Match: Q9DCB4 (cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-09
Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 84  FLLEAL-HNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQS 143
           FL+  L +N R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L  
Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGLDH 210

Query: 144 MVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQV 203
            V       D +G  +I++KTS  R+P  R  +   +  +EE+       K+   KR   
Sbjct: 211 NV-------DQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQ------KRFILKRDNS 270

Query: 204 AKDASANSSK------TSGSKSVEERKEEYNKARARIF 235
           + D   N ++         SKS+EER+EEY + R RIF
Sbjct: 271 SIDKEDNQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 294

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot
Match: Q9UBL0 (cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09
Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 83  QFLLEAL-HNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSLQ 142
           +FL+  L +N R+R+ +L+MEQ++  FI D      +F Q+ +SY R+  HRVA ++ L 
Sbjct: 151 EFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGLD 210

Query: 143 SMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEENSTMKVAIKQRPQKRSQ 202
             V       D +G  +I++KTS  R+P  R  +   +   EE+       K+   KR  
Sbjct: 211 HNV-------DQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQ------KRFILKRDN 270

Query: 203 VAKDASANSSK-------TSGSKSVEERKEEYNKARARIF 235
            + D   N             SKS+EER+EEY + R RIF
Sbjct: 271 SSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIF 296

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-08
Identity = 71/256 (27.73%), Postives = 121/256 (47.27%), Query Frame = 0


Query: 7   EDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFPSLPSSV 66
           E+   P + E++  ++   ++ L  S   +   S D +  + A      S   P    S 
Sbjct: 86  EESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKA------SDKLPRKMLSR 145

Query: 67  SSTIERVPEDVVNQVDQFLLEAL-HNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTS 126
            S+ E      ++ + +FL+  L +NPR+R+ +L++EQ++  FI +    + +F  + TS
Sbjct: 146 DSSQEYTDSTGID-LHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TS 205

Query: 127 YLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEEN 186
           Y R+  HRVA ++ L   V       D SG  +IV+KTS  R+P  +  +   ++  ++ 
Sbjct: 206 YHRMLLHRVAAYFGLDHNV-------DQSGKSVIVNKTSNTRIPDQKFNE---HIKDDKG 265

Query: 187 STMKVAIKQRPQKRSQVAKDASANSSK-----TSGSKSVEERKEEYNKARARIFNCSSNS 246
              +   K+   KR   + D   N  +        SKS+EER+EEY +AR RIF+  S  
Sbjct: 266 EDFQ---KRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLC 317

Query: 247 GSHAGVKVDADPRLQD 257
                +    D RLQD
Sbjct: 326 SQENYI---IDKRLQD 317

[Close]

BLAST of Cp4.1LG01g14360 vs. NCBI nr
Match: XP_023524762.1 (R3H domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023524768.1 R3H domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023524778.1 R3H domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023524786.1 R3H domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 929 bits (2400), Expect = 0.0
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. NCBI nr
Match: XP_022956629.1 (R3H domain-containing protein 2-like [Cucurbita moschata] >XP_022956631.1 R3H domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 917 bits (2371), Expect = 0.0
Identity = 467/473 (98.73%), Postives = 469/473 (99.15%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSS SSTI+RVPEDVVNQVDQFLLEAL+NPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL SHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. NCBI nr
Match: XP_022978330.1 (R3H domain-containing protein 2-like [Cucurbita maxima] >XP_022978411.1 R3H domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 466/473 (98.52%), Postives = 466/473 (98.52%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFD AAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDGAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSS SSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSASSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDA ANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDAGANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL SHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGM FIHPHEQTYQPFTQQYQQQPDAGFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMQFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. NCBI nr
Match: KAG7032009.1 (R3H domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 909 bits (2350), Expect = 0.0
Identity = 463/473 (97.89%), Postives = 465/473 (98.31%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNS DDAAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSLDDAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSS SSTI+RVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQ +SECQPRPL SHVPGPWNAQSSPAGLGYGHREAMVRPFN NV
Sbjct: 361 AVNYNTEFPQLGSAHRQVISECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNLNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGF LARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFDLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. NCBI nr
Match: XP_038892280.1 (uncharacterized protein LOC120081466 [Benincasa hispida])

HSP 1 Score: 831 bits (2147), Expect = 5.45e-302
Identity = 427/474 (90.08%), Postives = 446/474 (94.09%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD+S  DAAPA HFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLDHSVADAAPAYHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SL +S SST++RV ED +NQVDQFL EALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLSASPSSTLDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHY LQSMVLLDN LPDGSGSKIIV KTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYLLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENS+MKVAIKQRPQKRSQ+A+DASANSSKTSGSKSVEERKEEYNKARARIFN SSNS
Sbjct: 181 PTEENSSMKVAIKQRPQKRSQLARDASANSSKTSGSKSVEERKEEYNKARARIFNSSSNS 240

Query: 241 GS-HAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRT 300
           GS HAG KV+ADPR QDSYRGSL AAKVEEKMISGV D NF+RGLIDCSTSSSRISR RT
Sbjct: 241 GSSHAGGKVEADPRPQDSYRGSLSAAKVEEKMISGVSDTNFTRGLIDCSTSSSRISRGRT 300

Query: 301 DKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYA 360
           DKELP RQ ++PNSRVAIFRDREID KDPDYDRSYDRYMQRFDPGFGFSGGPY VQPMYA
Sbjct: 301 DKELPSRQ-YRPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYA 360

Query: 361 PAVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPN 420
           PAVNYNTEFPQLGSAHRQAVSECQPRPL  HVPGPWN QS+PAGLGYGHREA++RPFNPN
Sbjct: 361 PAVNYNTEFPQLGSAHRQAVSECQPRPLPPHVPGPWNTQSAPAGLGYGHREAIIRPFNPN 420

Query: 421 VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           VDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQYQQQPDA FGLARPR
Sbjct: 421 VDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL
Match: A0A6J1GZL4 (R3H domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458304 PE=4 SV=1)

HSP 1 Score: 917 bits (2371), Expect = 0.0
Identity = 467/473 (98.73%), Postives = 469/473 (99.15%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSS SSTI+RVPEDVVNQVDQFLLEAL+NPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSASSTIDRVPEDVVNQVDQFLLEALNNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL SHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL
Match: A0A6J1IPS8 (R3H domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111478332 PE=4 SV=1)

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 466/473 (98.52%), Postives = 466/473 (98.52%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFD AAPASHFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDGAAPASHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SLPSS SSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLPSSASSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIVSKTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENSTMKVAIKQRPQKRSQVAKDA ANSSKTSGSKSVEERKEEYNKARARIFNCSSNS
Sbjct: 181 PTEENSTMKVAIKQRPQKRSQVAKDAGANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL SHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYPGQQSGM FIHPHEQTYQPFTQQYQQQPDAGFGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPGQQSGMQFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL
Match: A0A1S3BGI0 (R3H domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489394 PE=4 SV=1)

HSP 1 Score: 830 bits (2144), Expect = 7.01e-302
Identity = 429/474 (90.51%), Postives = 445/474 (93.88%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           MEGSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD +  DAAPA HFSSASFP
Sbjct: 1   MEGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPKKNSKSLDVA--DAAPAYHFSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           SL +S SS ++RV ED +NQVDQFL EALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ
Sbjct: 61  SLSASASSALDRVSEDAINQVDQFLREALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIV KTSECR PAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRHPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEENS+MKVAIKQRPQKRSQ+A+DASANSSKTSGSKSVEERKEEYNKARARIF+ SSNS
Sbjct: 181 PTEENSSMKVAIKQRPQKRSQLARDASANSSKTSGSKSVEERKEEYNKARARIFSSSSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GSHAG KVDADPR QDSYRGSL AAKVEEKMI G+PD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSHAGGKVDADPRPQDSYRGSLSAAKVEEKMIPGIPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELP RQ +KPNSRVAIFRDREID KDPDYDRSYDRYMQRFDPGFGFSGGPY VQPMYAP
Sbjct: 301 KELPSRQ-YKPNSRVAIFRDREIDSKDPDYDRSYDRYMQRFDPGFGFSGGPYPVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSS-HVPGPWNAQSSPAGLGYGHREAMVRPFNPN 420
           AVNYNTEFPQLGSAHRQAVSECQPRPL   HVPGPWN QSSPAGLGYGHREAM+RPFNPN
Sbjct: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLPPPHVPGPWNTQSSPAGLGYGHREAMIRPFNPN 420

Query: 421 VDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           VDAHSSSGVYLHSSQYPGQQ+GMHFIHPHEQT+QPF+QQYQQQPDA FGLARPR
Sbjct: 421 VDAHSSSGVYLHSSQYPGQQTGMHFIHPHEQTHQPFSQQYQQQPDASFGLARPR 471

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL
Match: A0A6J1G0Z8 (R3H domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111449673 PE=4 SV=1)

HSP 1 Score: 825 bits (2131), Expect = 6.96e-300
Identity = 425/473 (89.85%), Postives = 442/473 (93.45%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           M+GSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD+S  DAA  SH SSASFP
Sbjct: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           S  +S SST +R  EDV+NQVDQFL EALHNPRERLSILRMEQDVEKFI DPARQQLEFQ
Sbjct: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIV KTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEEN+TMKVAIKQRPQKRSQVA+DAS++SSK+ GSKSVEERKEEYNKARARIFN  SNS
Sbjct: 181 PTEENNTMKVAIKQRPQKRSQVARDASSSSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GS+AG KVDADPRLQDS+RGSLGAAKVEEKMISG PD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGAPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELP RQ HKPNSRVAIFRDREID KDPDYDR+YDRYMQRFDPGFGFSGGPYTVQPMYAP
Sbjct: 301 KELPSRQ-HKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFGFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSA RQAVSECQPRPL  HVPGPWNAQSSPAGLGYGHREAM+RPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAPRQAVSECQPRPLPPHVPGPWNAQSSPAGLGYGHREAMIRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYP QQSGMHFIHPHEQ +QPF+QQYQQQPDA FGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSQQYQQQPDASFGLARPR 472

[Close]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL
Match: A0A6J1HWM6 (R3H domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467527 PE=4 SV=1)

HSP 1 Score: 820 bits (2119), Expect = 4.68e-298
Identity = 424/473 (89.64%), Postives = 440/473 (93.02%), Query Frame = 0


Query: 1   MEGSAVEDLGAPESWEVANLDEAMSRLMLPSSSPTKNSKSLDNSFDDAAPASHFSSASFP 60
           M+GSAVEDLGAPESWEVA+LDEAMSRLMLPSSSP KNSKSLD+S  DAA  SH SSASFP
Sbjct: 1   MDGSAVEDLGAPESWEVADLDEAMSRLMLPSSSPLKNSKSLDHSVADAALGSHSSSASFP 60

Query: 61  SLPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQ 120
           S  +S SST +R  EDV+NQVDQFL EALHNPRERLSILRMEQDVEKFI DPARQQLEFQ
Sbjct: 61  SPSASTSSTPDRASEDVINQVDQFLREALHNPRERLSILRMEQDVEKFICDPARQQLEFQ 120

Query: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNL 180
           QLPTSYLRLAAHRVAQHYSLQSMVLLDN LPDGSGSKIIV KTSECRLPAIRLADIPVNL
Sbjct: 121 QLPTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSKIIVRKTSECRLPAIRLADIPVNL 180

Query: 181 PTEENSTMKVAIKQRPQKRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNS 240
           PTEEN+TMKVAIKQRPQKRSQVA+DAS+NSSK+ GSKSVEERKEEYNKARARIFN  SNS
Sbjct: 181 PTEENNTMKVAIKQRPQKRSQVARDASSNSSKSGGSKSVEERKEEYNKARARIFNSGSNS 240

Query: 241 GSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTD 300
           GS+AG KVDADPRLQDS+RGSLGAAKVEEKMISGVPD NFSRGLIDCSTSSSRISRSRTD
Sbjct: 241 GSNAGGKVDADPRLQDSFRGSLGAAKVEEKMISGVPDTNFSRGLIDCSTSSSRISRSRTD 300

Query: 301 KELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAP 360
           KELP RQ HKPNSRVAIFRDREID KDPDYDR+YDRYMQRFDPGF FSGGPYTVQPMYAP
Sbjct: 301 KELPSRQ-HKPNSRVAIFRDREIDSKDPDYDRNYDRYMQRFDPGFSFSGGPYTVQPMYAP 360

Query: 361 AVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNV 420
           AVNYNTEFPQLGSA RQAVSECQPRPL  HV GPWNAQSSPAGLGYGHREAM+RPFNPNV
Sbjct: 361 AVNYNTEFPQLGSAPRQAVSECQPRPLPPHVSGPWNAQSSPAGLGYGHREAMIRPFNPNV 420

Query: 421 DAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQQYQQQPDAGFGLARPR 473
           DAHSSSGVYLHSSQYP QQSGMHFIHPHEQ +QPF+ QYQQQPDA FGLARPR
Sbjct: 421 DAHSSSGVYLHSSQYPCQQSGMHFIHPHEQAHQPFSLQYQQQPDASFGLARPR 472

[Close]

BLAST of Cp4.1LG01g14360 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-43
Identity = 150/407 (36.86%), Postives = 208/407 (51.11%), Query Frame = 0


Query: 62  LPSSVSSTIERVPEDVVNQVDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQ 121
           LP +   T   V  D    VD FL+EALHN R RL+ILRME DV++ +++P +QQ EFQ 
Sbjct: 5   LPETAVVTGGSVIGDYGFNVDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQH 64

Query: 122 LPTSYLRLAAHRVAQHYSLQSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLP 181
            PTSYLRLAAHRVA HY L + V       DG+ ++I+V+KT+E + PA+RL++IPV   
Sbjct: 65  FPTSYLRLAAHRVANHYGLATAV--QESGADGNENRILVTKTTESKFPAVRLSEIPVAKQ 124

Query: 182 TEEN--STMKVAIKQRPQKRSQVAKDASANSSKTSGS-KSVEERKEEYNKARARIFNCSS 241
           +E     + KV+IK RP K S      + +  K  G  +SVEERKEEY+KAR RIF+   
Sbjct: 125 SENGKFESRKVSIKTRPSKGSGY---GAGDLEKNRGPLRSVEERKEEYDKARERIFS--- 184

Query: 242 NSGSHAGVKVDADPRLQDSYRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSR 301
                 G+  D           S    +V E+      +A+ SR         S+ +   
Sbjct: 185 ---GLTGLSCD----------DSSSETQVYER------NASLSRD----DKQVSKNAYVE 244

Query: 302 TDKELPIRQVHKPNSRVAIFRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMY 361
             K L IR+   P SRVAIFRDRE D  DPDYDR + RY++       F+  P+ +Q + 
Sbjct: 245 VKKNLSIRE-SGPTSRVAIFRDREKDRFDPDYDRRHQRYIRSLPVNQNFNLPPFNIQQI- 304

Query: 362 APAVNYNTEFPQLGSAHRQAVSECQPRPLSSHVPGPWNAQSSPAGLGYG-HREAMVRPFN 421
            P   Y   F                    + +P P      PA LG+G H  +++ P+ 
Sbjct: 305 -PTPYYEMGFTGY-----------------NQIPSP------PAPLGFGPHPSSIMSPYG 344

Query: 422 PNVDAHSSSGVYLHSSQYPGQQSGMHFIHPHEQTYQPFTQ-QYQQQP 464
             +DA     +Y+H   +P   + M + HP+EQ      Q Q+ QQP
Sbjct: 365 TTMDA-----MYMH---WP--NAAMMYAHPYEQFRNGSLQAQFVQQP 344

[Close]

BLAST of Cp4.1LG01g14360 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 174.1 bits (440), Expect = 2.7e-43
Identity = 129/312 (41.35%), Postives = 176/312 (56.41%), Query Frame = 0


Query: 81  VDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME D++KF ++P + Q EF   PTSYLRLAAHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70

Query: 141 QSMVLLDN--GLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTE-ENSTMKVAIKQRPQ 200
            +M  LDN  G  DGS ++I+V+KT+E R P + L++IPV  P        K+AIK RP+
Sbjct: 71  VTMA-LDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPRPK 130

Query: 201 KRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDS 260
           + S      S +  + +  +SVEERKEEY+KARARIFN  S+S S            +DS
Sbjct: 131 RGSGCG--GSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDS------------EDS 190

Query: 261 YRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAI 320
              SL    +E      V +   +R   + + ++S +     D            SRVAI
Sbjct: 191 --SSLRPPSLE------VRNTCINRNETEVAVNNSPVDAVTRDS--------GRTSRVAI 250

Query: 321 FRDREIDIKDPDYDRSYDRYMQRFDPGFGF-----SGGPYTVQPMYAPAVNYNTEFPQLG 380
            RDRE D  DPDYDRSYDRY+   DP + +     SG  ++  P++ P   ++  FP + 
Sbjct: 251 IRDREKDRYDPDYDRSYDRYV--VDPAYRYVRVMPSGQSFSPMPIHIPF--HDGFFPHMP 287

Query: 381 SAHRQAVSECQP 385
             H+  ++   P
Sbjct: 311 RGHQANLNYGHP 287

[Close]

BLAST of Cp4.1LG01g14360 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 172.6 bits (436), Expect = 7.8e-43
Identity = 128/307 (41.69%), Postives = 172/307 (56.03%), Query Frame = 0


Query: 81  VDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME D++KF ++P + Q EF   PTSYLRLAAHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70

Query: 141 QSMVLLDN--GLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTE-ENSTMKVAIKQRPQ 200
            +M  LDN  G  DGS ++I+V+KT+E R P + L++IPV  P        K+AIK RP+
Sbjct: 71  VTMA-LDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPRPK 130

Query: 201 KRSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDS 260
           + S      S +  + +  +SVEERKEEY+KARARIFN  S+S S            +DS
Sbjct: 131 RGSGCG--GSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDS------------EDS 190

Query: 261 YRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAI 320
              SL    +E      V +   +R   + + ++S +     D            SRVAI
Sbjct: 191 --SSLRPPSLE------VRNTCINRNETEVAVNNSPVDAVTRDS--------GRTSRVAI 250

Query: 321 FRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYNTEFPQLGSAHRQ 380
            RDRE D  DPDYDRSYDRY++    G  FS       P++ P   ++  FP +   H+ 
Sbjct: 251 IRDREKDRYDPDYDRSYDRYVRVMPSGQSFS-----PMPIHIPF--HDGFFPHMPRGHQA 279

Query: 381 AVSECQP 385
            ++   P
Sbjct: 311 NLNYGHP 279

[Close]

BLAST of Cp4.1LG01g14360 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 163.3 bits (412), Expect = 4.7e-40
Identity = 120/311 (38.59%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 81  VDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME DV++F++ P +QQ EFQ  PTSYLR AAHRVA HY L
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVANHYGL 80

Query: 141 QSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPV-NLPTEENSTMKVAIKQRPQKR 200
            + V   +G  DG+ S+I+V+K+S+ R PA RL++IPV    T +   MKV IK RP K 
Sbjct: 81  ITSV--RDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMKVVIKPRPTKG 140

Query: 201 SQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDS-- 260
           S +  D      K    KSVEERKE+Y++ARARIFN          V +D +    ++  
Sbjct: 141 SGMEGD----ELKGGLLKSVEERKEDYDRARARIFN--------GLVNIDCNDSSSETNP 200

Query: 261 YRGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAI 320
           +R +  +++ E +++          G I+   ++             I +   P SR+AI
Sbjct: 201 WRVNCSSSRDENQVL--------KNGNIEADKNN-------------ISRKSNPASRIAI 260

Query: 321 FRDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYN------TEFPQL 380
            RDRE D  DPDYDRS  RY+             + +Q M  P  +        T  P L
Sbjct: 261 LRDREKDRYDPDYDRSNYRYISNLPVDQNLCVAHFNIQTMGTPIYDMGFRGYSPTAPPSL 296

Query: 381 GSAHRQAVSEC 383
                  +S C
Sbjct: 321 NLGQHSVMSPC 296

[Close]

BLAST of Cp4.1LG01g14360 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-39
Identity = 135/373 (36.19%), Postives = 189/373 (50.67%), Query Frame = 0


Query: 81  VDQFLLEALHNPRERLSILRMEQDVEKFIRDPARQQLEFQQLPTSYLRLAAHRVAQHYSL 140
           VD FL+EAL NPR RL+ILRME D++KF + P +QQ EFQ LPTSYLRL AHRVAQHY L
Sbjct: 11  VDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVAQHYGL 70

Query: 141 QSMVLLDNGLPDGSGSKIIVSKTSECRLPAIRLADIPVNLPTEEN--STMKVAIKQRPQK 200
            +  L   G+ DGSG++I+ +KT E R P + L++IPV  P         K+AIK RP +
Sbjct: 71  FTTALEGGGV-DGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKPRPNR 130

Query: 201 RSQVAKDASANSSKTSGSKSVEERKEEYNKARARIFNCSSNSGSHAGVKVDADPRLQDSY 260
            +      S +  + +  +SVEERKEEY+KARARIFN  S+S S      D+  R     
Sbjct: 131 GA--GGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSE-----DSSTRAPPP- 190

Query: 261 RGSLGAAKVEEKMISGVPDANFSRGLIDCSTSSSRISRSRTDKELPIRQVHKPNSRVAIF 320
                  +++ K  +  P  N +  +++ +++   + R+   ++          SRVAI 
Sbjct: 191 ----PYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRD------SGRTSRVAII 250

Query: 321 RDREIDIKDPDYDRSYDRYMQRFDPGFGFSGGPYTVQPMYAPAVNYNTEFPQLGSAHRQA 380
           RDRE D  DPDYDR  +RY++   P   F+       P+  P   ++  FPQ+       
Sbjct: 251 RDREKDRYDPDYDR--NRYVRVAPPVQNFN-------PIPIPLPFHDAIFPQM------- 310

Query: 381 VSECQPRPLSSHVPGPWNAQSSPAGLGYGHREAMVRPFNPNVDAHSSS---GVYLHSSQY 440
                PR              + A L YGH      P NP + A S +      +  +Q 
Sbjct: 311 -----PR--------------TQASLNYGH------PLNPAMTAPSYTEWPSATMTYAQT 323

Query: 441 PGQQSGMHFIHPH 449
                  HF HP+
Sbjct: 371 LNASDVHHFRHPN 323

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g14360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80TM6	5.9e-11	33.54	R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2	[more]
A0JNC2	7.7e-11	33.54	R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1	[more]
Q9DCB4	1.4e-09	33.54	cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2	[more]
Q9UBL0	5.5e-09	33.13	cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2	[more]
Q15032	6.1e-08	27.73	R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3	[more]

BLAST of Cp4.1LG01g14360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524762.1	0.0	100.00	R3H domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023524768....	[more]
XP_022956629.1	0.0	98.73	R3H domain-containing protein 2-like [Cucurbita moschata] >XP_022956631.1 R3H do...	[more]
XP_022978330.1	0.0	98.52	R3H domain-containing protein 2-like [Cucurbita maxima] >XP_022978411.1 R3H doma...	[more]
KAG7032009.1	0.0	97.89	R3H domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038892280.1	5.45e-302	90.08	uncharacterized protein LOC120081466 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g14360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZL4	0.0	98.73	R3H domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1114583...	[more]
A0A6J1IPS8	0.0	98.52	R3H domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111478332...	[more]
A0A1S3BGI0	7.01e-302	90.51	R3H domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489394 PE=...	[more]
A0A6J1G0Z8	6.96e-300	89.85	R3H domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114496...	[more]
A0A6J1HWM6	4.68e-298	89.64	R3H domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467527...	[more]

BLAST of Cp4.1LG01g14360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56680.1	1.6e-43	36.86	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.1	2.7e-43	41.35	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.2	7.8e-43	41.69	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	4.7e-40	38.59	Single-stranded nucleic acid binding R3H protein	[more]
AT5G05100.1	1.4e-39	36.19	Single-stranded nucleic acid binding R3H protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 79..163 e-value: 7.9E-7 score: 38.7
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 98..145 e-value: 1.6E-11 score: 43.9
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 95..164 score: 10.883776
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 68..198 e-value: 2.5E-33 score: 116.4
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 72..197
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 188..235 e-value: 4.5E-12 score: 46.5
IPR024771	SUZ domain	PROSITE	PS51673	SUZ	coord: 167..238 score: 12.917503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..215
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 11..463
None	No IPR available	PANTHER	PTHR15672:SF8	PROTEIN ENCORE	coord: 11..463
None	No IPR available	CDD	cd02642	R3H_encore_like	coord: 94..163 e-value: 4.85775E-19 score: 78.7985

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g14360.1	Cp4.1LG01g14360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding