Cp4.1LG01g13950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g13950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	sec-independent protein translocase protein TATC, chloroplastic
Location	Cp4.1LG01: 7931034 .. 7934797 (-)
RNA-Seq Expression	Cp4.1LG01g13950
Synteny	Cp4.1LG01g13950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGGTACTAATATTACCAAAACCATGGTTGATATCAAGGTCTTTTCGCCTGAAAATCGTGCTTGGTTATAGTTTGCGATTCCGAACCATTTTGGAAGCTTTTTGTGACATGGTTAAACTGCTTATTTCTTTGGTTTTCCCTTATTAGCAATTGGATTATGTAGAGTTCGTCCTTAATTTTGTTTAGATTGTGCACGTGATAGGATTAATCCTAGAAATTACCTGTGTCTAATAGAGAAGCATGTCCTGGTTAGATATTTAGCTGAGCTTACGTGAGTCCAGGATTTGAAGGTAGAAGTTCATAAATGGATTTCTGTGAATCCTTTATCCAGGAAGGATAAAACTTATTGGGACTGTTCATGCTTTCAGATTTAAATGTTCATTGCACATATTTGTTCCTACCTATTGAATTATGTGGCTTCAGAAAGTTGATGCTATAATTGATATACAAGTTGCTAATACCCCATTTTTTCATGGAAAAATAAATAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGAATGATGAAATATAATTGCATTATTAGTATAATCACTTTTATGGACTTGTGAGTTGTGAGCTTGGTTGCCATCCATTTGAATAGCTATTGATACTAAAATGGTTCGTGATACAAAAAAAATCTCTTTCCTTTTTTATCAACCACTATTAAATACAACAAGAATCTAATTAGATATTAAGAACATAGAAAAGTACAATGTATATCGTTTTTTGAAATACTCAGCTTCTTAGTTATATGATGATTGTGCACTGGGAAGCTTTCTGAATATGCGAACATAATGAAGCTATGGCGTTGCTTACCCTTTTTATTTGTTAGTATCCCGATGTTGAGTTAAAACAGTTTCCTTACTGTATCTATCTTTTTGGTGTGTATTTATATTAAGAGTCTTGTGGAGGAGAATTTCACACTGATCTTACTAAAGAAGTGAAAAAGTGTTCCCCGATGGGTCGCGTCGCGTTCTCAAAGTGAAAGTTTTTTGCCTTTCTTAAGATAGGGCATGGTTCAATTGTAGTTTTTCGGTTGAGTTCGTTCTTTTATTTCAAATGCAGCCCATTCCTGGTTAACTCTCTGCTCGGGATGAATGGGCTGGGTGCCCGTTCTTCATTCCCAATATTAAATATTGTTTCTGATTTGTGTTTAATTCCAAAATTCATTCTCCACTTCCCATATGCTGTTGTATATTAGCTCATGTTGTTGGTGGGGATCAATAACAATAAAATTCTCCTTGTGCGCTCCAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTTTTTGCTTAGGAATGTTGTTCATACACTAGAATGCTGGTCACCAGCCAATCCCTAGAAATTCCGATTCTTTCTTTCTCCTTTAGGAACAATCGTAAACCATTCAAACCATTCATGGTAATTTCGCCTATGGAGCTAGCTTTTTGACAGCGTTCATTTCATCTTGTTTGTAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG

mRNA sequence

TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-127
Identity = 238/315 (75.56%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 46  SLLSRRNFNRFVCSAVDDDVREKQMTDLGGGNR--STVVEDVPD-------IGESSTNGA 105
           SL   ++F+R VC AVDD++REKQ   L   +    + VE+ P+       I E +    
Sbjct: 39  SLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENF 98

Query: 106 P---EKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKEL 165
               E+S +Y+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +ILGCFAFSK+L
Sbjct: 99  KEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDL 158

Query: 166 VLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 225
           V ILEAPVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER
Sbjct: 159 VKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEER 218

Query: 226 RFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 285
           +FLGPIVLGSSVLFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFS
Sbjct: 219 KFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFS 278

Query: 286 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 345
           TGLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLL
Sbjct: 279 TGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLL 338

Query: 346 GLYLGGAWVVKLSGR 349
           GLYLGGAW+VKL+GR
Sbjct: 339 GLYLGGAWMVKLAGR 353

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-121
Identity = 244/346 (70.52%), Postives = 275/346 (79.48%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVF 122
           DD      T+   G  S V +  PD  E         S VY FLYP K+ LPDDKEM++F
Sbjct: 65  DD---DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIF 124

Query: 123 DHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLK 182
           DHLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLK
Sbjct: 125 DHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLK 184

Query: 183 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAA 242
           VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAA
Sbjct: 185 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAA 244

Query: 243 LNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIW 302
           LNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIW
Sbjct: 245 LNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIW 304

Query: 303 RYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           RYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 RYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120
Identity = 236/313 (75.40%), Postives = 260/313 (83.07%), Query Frame = 0


Query: 50  RRNFNRFVCSAVDDD--------VREKQMTDLGGGNRSTVVEDVPDIGESSTNGA----- 109
           RR      C+AVD D        + +K+    G G     +ED P  G    NG+     
Sbjct: 48  RRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIG---AALEDPPP-GPPVENGSFGGPS 107

Query: 110 -PEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVL 169
             E+S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAILGCFAFSK+LV+
Sbjct: 108 QEEQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVI 167

Query: 170 ILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRF 229
            LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+F
Sbjct: 168 FLEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKF 227

Query: 230 LGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTG 289
           LGPIVLGSSVLFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTG
Sbjct: 228 LGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTG 287

Query: 290 LSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGL 349
           LSFQVPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGL
Sbjct: 288 LSFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGL 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-118
Identity = 249/363 (68.60%), Postives = 277/363 (76.31%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAR-TSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCS 60
           MGS +GAL SH       F  R   H +L+  R  P            LS R+     C+
Sbjct: 1   MGS-AGALLSHSPPGLGGFPPRHHHHHRLSVLRCVPLLPSPA---PEPLSCRHGRHLRCA 60

Query: 61  AVDDDVREK---------QMTDLGGGNRSTVVED-VPDIGESSTNGA----PEKSDVYNF 120
           AVD     +         Q  +   G+    +ED  P   ++ + G      E+S +YNF
Sbjct: 61  AVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGITEDEEQSSLYNF 120

Query: 121 LYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQG 180
           LYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAILGCFA+SK+L+ ILEAPV  QG
Sbjct: 121 LYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQG 180

Query: 181 VRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSV 240
           VRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLGPIVLGSSV
Sbjct: 181 VRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSV 240

Query: 241 LFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQI 300
           LFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSFQVPVIQ+
Sbjct: 241 LFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQL 300

Query: 301 LLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKL 349
           LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL
Sbjct: 301 LLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKL 359

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-78
Identity = 151/238 (63.45%), Postives = 187/238 (78.57%), Query Frame = 0


Query: 111 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 170
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K LV  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 171 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 230
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 231 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 290
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 291 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: XP_023539458.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 656 bits (1693), Expect = 5.02e-237
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348

[Close]

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 647 bits (1670), Expect = 1.55e-233
Identity = 346/348 (99.43%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 647 bits (1670), Expect = 6.36e-233
Identity = 346/348 (99.43%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 39  MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 98

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 99  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 158

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 159 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 218

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 219 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 278

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 279 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 338

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 339 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

[Close]

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: XP_022982565.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 641 bits (1653), Expect = 6.03e-231
Identity = 343/348 (98.56%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TSHSQLASARI PTSRRSKLRFS+LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: XP_038892645.1 (sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispida])

HSP 1 Score: 611 bits (1576), Expect = 3.26e-219
Identity = 324/348 (93.10%), Postives = 336/348 (96.55%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLA A I PT RRSKLRF+ LLSR+NFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSQSQLALAPISPTLRRSKLRFTGLLSRKNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGG  STVVEDVPDI E+STNGAPE+SD+YNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TELGGGKGSTVVEDVPDIAENSTNGAPERSDIYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLT+AER+FL PIVLGSS+LFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTKAERQFLAPIVLGSSILFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYA GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQ+GLVSGDQMLS
Sbjct: 241 AALNFFVSYAAGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQVGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 647 bits (1670), Expect = 7.49e-234
Identity = 346/348 (99.43%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 641 bits (1653), Expect = 2.92e-231
Identity = 343/348 (98.56%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TSHSQLASARI PTSRRSKLRFS+LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 608 bits (1569), Expect = 1.84e-218
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTS SQL S RI PT RR+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 608 bits (1569), Expect = 1.84e-218
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTS SQL S RI PT RR+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL
Match: A0A0A0KTA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.06e-217
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTS SQL S RI PT RR+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDD+EMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSY+VLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Cp4.1LG01g13950 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 437.6 bits (1124), Expect = 9.5e-123
Identity = 244/346 (70.52%), Postives = 275/346 (79.48%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVF 122
           DD      T+   G  S V +  PD  E         S VY FLYP K+ LPDDKEM++F
Sbjct: 65  DD---DSPTETTPGVGSAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIF 124

Query: 123 DHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLK 182
           DHLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLK
Sbjct: 125 DHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLK 184

Query: 183 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAA 242
           VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAA
Sbjct: 185 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAA 244

Query: 243 LNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIW 302
           LNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIW
Sbjct: 245 LNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIW 304

Query: 303 RYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           RYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 RYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	1.6e-127	75.56	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
Q9SJV5	1.3e-121	70.52	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
C4IZX0	1.1e-120	75.40	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9AVE6	1.1e-118	68.60	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
P54086	7.0e-78	63.45	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Cp4.1LG01g13950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539458.1	5.02e-237	100.00	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo ...	[more]
XP_022956650.1	1.55e-233	99.43	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
KAG6601263.1	6.36e-233	99.43	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]
XP_022982565.1	6.03e-231	98.56	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxim...	[more]
XP_038892645.1	3.26e-219	93.10	sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispi...	[more]

BLAST of Cp4.1LG01g13950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYD1	7.49e-234	99.43	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	2.92e-231	98.56	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]
A0A5A7SVD3	1.84e-218	91.67	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	1.84e-218	91.67	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0KTA2	1.06e-217	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g13950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	9.5e-123	70.52	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 194..212 score: 54.92 coord: 120..147 score: 39.08 coord: 212..238 score: 44.65 coord: 263..291 score: 45.61
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 122..336 e-value: 1.3E-80 score: 268.3
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 123..331 e-value: 1.0E-60 score: 205.1
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 51..348
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 116..348 score: 16.461205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..96
None	No IPR available	PANTHER	PTHR30371:SF7	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE	coord: 51..348
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 263..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13950.1	Cp4.1LG01g13950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity