Cp4.1LG01g13870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g13870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG01: 7996970 .. 7998132 (+)
RNA-Seq Expression	Cp4.1LG01g13870
Synteny	Cp4.1LG01g13870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGGGCTTTGTTGTCCCCCTCCCCCCTTGCCTTAAGGTCCCTACATCCCCATCATCCCCATATCCCATATAAATAATATGCATATAAACCCCCAATTTCTTTACCCAAAGCCCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTATGTTTCATTTCTTTCTGTCGATCACTTAACTATGTTTGAATCCGCTTTTAATTCATAACTTGACGTGTTATGGAGTGGACAAAGCNGATCTTTTTTTTTTTTTTTTTTTGTTGGTTAGATTAGTTTGAAATACTTACACTGGCTATGTTTATTGGTGGGATCAGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGTAAGTTTATAACAACGGTTTGTTTAATCGAATCAAATTAATTTGAATCTGTTTTAAATTTTTGATCTAATTTGGTGACTTGGCTTTGTTGGGAAACGGACAGGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAATTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAACAAAATCTTCCAATTATTTGTTTTTATATTATATACTTTTATCTCTCATTCCTCGATTTGATGATTTATGTTCAACGGGTAACCTAAAT

mRNA sequence

AAGAGGGCTTTGTTGTCCCCCTCCCCCCTTGCCTTAAGGTCCCTACATCCCCATCATCCCCATATCCCATATAAATAATATGCATATAAACCCCCAATTTCTTTACCCAAAGCCCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAATTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAACAAAATCTTCCAATTATTTGTTTTTATATTATATACTTTTATCTCTCATTCCTCGATTTGATGATTTATGTTCAACGGGTAACCTAAAT

Coding sequence (CDS)

ATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAA

Protein sequence

MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN

Homology

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot
Match: Q8RYC6 (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 4.2e-35
Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 9   YCEGKGENGSIDLGLSLRTLQ------PEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 68
           Y + K   G IDLGLSLRT+Q      P  +  ++GYGE     I+W    +       N
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSY-------N 79

Query: 69  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 128
               +K  + G   + Q YY  E E             ++AYVKVN+DG++VGRKVC+  
Sbjct: 80  SITQLKSEDTGHQRLAQGYYNNEGE----------SRGKYAYVKVNLDGLVVGRKVCLVD 139

Query: 129 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 188
            G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE V R
Sbjct: 140 QGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDR 189

Query: 189 LRIARKDEGFV 194
           +RIAR+++  +
Sbjct: 200 MRIARRNDALL 189

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot
Match: Q9C5X0 (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.9e-30
Identity = 74/188 (39.36%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 3   PNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 62
           P     Y +     G IDLGLSLRT+Q E+                              
Sbjct: 45  PKYHPYYSQTTEFGGVIDLGLSLRTIQHEI------------------------------ 104

Query: 63  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 122
                 ++++G        YC  E             ++W YVKV MDG++VGRKVC+  
Sbjct: 105 ------YHSSG------QRYCSNE----------GYRRKWGYVKVTMDGLVVGRKVCVLD 164

Query: 123 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 182
           HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+D +  WR+ GDVPW +F+E V+R
Sbjct: 165 HGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVER 180

Query: 183 LRIARKDE 191
           LRI R+++
Sbjct: 225 LRITRRND 180

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ---- 144
           E + ++ +E  + K +   +VKVNMDG ++GRKV +  H SY +LAL LE MF +     
Sbjct: 146 ESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL 205

Query: 145 CES----GLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           C S     LKL +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 206 CASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ---- 144
           E + ++ +E  + K +   +VKVNMDG ++GRKV +  H SY +LAL LE MF +     
Sbjct: 146 ESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL 205

Query: 145 CES----GLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           C S     LKL +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 206 CASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 6.7e-17
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----- 144
           ++E ++  + V  K Q   ++KVNMDGV +GRKV +  H SY +LA  LEDMF R     
Sbjct: 113 DDEPKDVTKKVNGKVQ-VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 172

Query: 145 -----QCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
                Q    L+L +  SEF L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 173 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227

[Close]

BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: XP_023513171.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1058), Expect = 2.95e-145
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 120
           MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI
Sbjct: 61  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 120

Query: 121 FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV 180
           FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV
Sbjct: 121 FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV 180

Query: 181 KRLRIARKDEGFVAIHQN 198
           KRLRIARKDEGFVAIHQN
Sbjct: 181 KRLRIARKDEGFVAIHQN 198

[Close]

BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: XP_023513162.1 (auxin-responsive protein IAA32-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407 bits (1045), Expect = 3.04e-143
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 120
           MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI
Sbjct: 61  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 120

Query: 121 FQHGSYSSLALQLEDMFG--RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180
           FQHGSYSSLALQLEDMFG  RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE
Sbjct: 121 FQHGSYSSLALQLEDMFGSGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180

Query: 181 DVKRLRIARKDEGFVAIHQN 198
           DVKRLRIARKDEGFVAIHQN
Sbjct: 181 DVKRLRIARKDEGFVAIHQN 200

[Close]

BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: KAG6601273.1 (Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1028), Expect = 1.19e-140
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKV 120
           MNINMNMKH  NNNGVVVV+QDYYCC EEEEEAEEVVQSK QRWAYVKVNMDGVIVGRKV
Sbjct: 61  MNINMNMKHSNNNNGVVVVQQDYYCCAEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKV 120

Query: 121 CIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180
           CIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE
Sbjct: 121 CIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180

Query: 181 DVKRLRIARKDEGFVAIHQN 198
           DVKRLRIARKDEGFVAIHQN
Sbjct: 181 DVKRLRIARKDEGFVAIHQN 200

[Close]

BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: KAG7032061.1 (Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396 bits (1018), Expect = 4.77e-139
Identity = 195/201 (97.01%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64

Query: 61  MNINMNMKH--NNNGVVVVEQDYYCC-EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRK 120
           MNIN+NMKH  NNNGVVVV+QDYYCC EEEEEEAEEVVQSK QRWAYVKVNMDGVIVGRK
Sbjct: 65  MNININMKHSNNNNGVVVVQQDYYCCAEEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRK 124

Query: 121 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 180
           VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV
Sbjct: 125 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 184

Query: 181 EDVKRLRIARKDEGFVAIHQN 198
           EDVKRLRIARKDEGFVAIHQN
Sbjct: 185 EDVKRLRIARKDEGFVAIHQN 205

[Close]

BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: XP_022957191.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 395 bits (1014), Expect = 1.57e-138
Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKV 120
           MNIN+NMKH  NNNGVVVVEQDYYCCEEEEE AEEVVQSK QRWAYVKVNMDGVIVGRKV
Sbjct: 61  MNININMKHSNNNNGVVVVEQDYYCCEEEEE-AEEVVQSKQQRWAYVKVNMDGVIVGRKV 120

Query: 121 CIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180
           CIFQHGSYS+LALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE
Sbjct: 121 CIFQHGSYSNLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180

Query: 181 DVKRLRIARKDEGFVAIHQN 198
           DVKRLRIARKDEGFVAIHQN
Sbjct: 181 DVKRLRIARKDEGFVAIHQN 199

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL
Match: A0A6J1GYJ4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 7.59e-139
Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKV 120
           MNIN+NMKH  NNNGVVVVEQDYYCCEEEEE AEEVVQSK QRWAYVKVNMDGVIVGRKV
Sbjct: 61  MNININMKHSNNNNGVVVVEQDYYCCEEEEE-AEEVVQSKQQRWAYVKVNMDGVIVGRKV 120

Query: 121 CIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180
           CIFQHGSYS+LALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE
Sbjct: 121 CIFQHGSYSNLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVE 180

Query: 181 DVKRLRIARKDEGFVAIHQN 198
           DVKRLRIARKDEGFVAIHQN
Sbjct: 181 DVKRLRIARKDEGFVAIHQN 199

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL
Match: A0A6J1J6Y8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 7.83e-137
Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHG+NWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGMNWGAADHTAADLY 60

Query: 61  MN--INMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGR 120
           MN  IN+NMKH  NNNGVVVVEQDYYCCEEEEE AEEVVQSK QRWAYVKVNMDGVIVGR
Sbjct: 61  MNMNININMKHSNNNNGVVVVEQDYYCCEEEEE-AEEVVQSKQQRWAYVKVNMDGVIVGR 120

Query: 121 KVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF 180
           KVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF
Sbjct: 121 KVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF 180

Query: 181 VEDVKRLRIARKDEGFVAIHQN 198
           VEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 VEDVKRLRIARKDEGFVAIHQN 201

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL
Match: A0A6J1GZV1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 7.83e-137
Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 61  MNINMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKV 120
           MNIN+NMKH  NNNGVVVVEQDYYCCEEEEE AEEVVQSK QRWAYVKVNMDGVIVGRKV
Sbjct: 61  MNININMKHSNNNNGVVVVEQDYYCCEEEEE-AEEVVQSKQQRWAYVKVNMDGVIVGRKV 120

Query: 121 CIFQHGSYSSLALQLEDMFG--RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF 180
           CIFQHGSYS+LALQLEDMFG  RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF
Sbjct: 121 CIFQHGSYSNLALQLEDMFGSGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF 180

Query: 181 VEDVKRLRIARKDEGFVAIHQN 198
           VEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 VEDVKRLRIARKDEGFVAIHQN 201

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL
Match: A0A6J1JFN3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1)

HSP 1 Score: 385 bits (988), Expect = 8.07e-135
Identity = 194/204 (95.10%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHG+NWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGMNWGAADHTAADLY 60

Query: 61  MN--INMNMKH--NNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGR 120
           MN  IN+NMKH  NNNGVVVVEQDYYCCEEEEE AEEVVQSK QRWAYVKVNMDGVIVGR
Sbjct: 61  MNMNININMKHSNNNNGVVVVEQDYYCCEEEEE-AEEVVQSKQQRWAYVKVNMDGVIVGR 120

Query: 121 KVCIFQHGSYSSLALQLEDMFG--RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWK 180
           KVCIFQHGSYSSLALQLEDMFG  RQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWK
Sbjct: 121 KVCIFQHGSYSSLALQLEDMFGSGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWK 180

Query: 181 QFVEDVKRLRIARKDEGFVAIHQN 198
           QFVEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 QFVEDVKRLRIARKDEGFVAIHQN 203

[Close]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL
Match: A0A0A0KT91 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 1.17e-81
Identity = 133/196 (67.86%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINM 66
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D            
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQD------------ 73

Query: 67  NMKHNNNGVVVVEQDYYCC-EEEEEEAEEVVQSK--HQRWAYVKVNMDGVIVGRKVCIFQ 126
                        QDYYCC ++EE+  ++VVQSK  HQ+WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  -------------QDYYCCTDQEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 127 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 186
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 187 LRIARKDEGFVAIHQN 198
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]

BLAST of Cp4.1LG01g13870 vs. TAIR 10
Match: AT2G01200.2 (indole-3-acetic acid inducible 32 )

HSP 1 Score: 149.4 bits (376), Expect = 3.0e-36
Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 9   YCEGKGENGSIDLGLSLRTLQ------PEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 68
           Y + K   G IDLGLSLRT+Q      P  +  ++GYGE     I+W    +       N
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSY-------N 79

Query: 69  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 128
               +K  + G   + Q YY  E E             ++AYVKVN+DG++VGRKVC+  
Sbjct: 80  SITQLKSEDTGHQRLAQGYYNNEGE----------SRGKYAYVKVNLDGLVVGRKVCLVD 139

Query: 129 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 188
            G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE V R
Sbjct: 140 QGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDR 189

Query: 189 LRIARKDEGFV 194
           +RIAR+++  +
Sbjct: 200 MRIARRNDALL 189

[Close]

BLAST of Cp4.1LG01g13870 vs. TAIR 10
Match: AT1G15050.1 (indole-3-acetic acid inducible 34 )

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-31
Identity = 74/188 (39.36%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 3   PNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 62
           P     Y +     G IDLGLSLRT+Q E+                              
Sbjct: 45  PKYHPYYSQTTEFGGVIDLGLSLRTIQHEI------------------------------ 104

Query: 63  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 122
                 ++++G        YC  E             ++W YVKV MDG++VGRKVC+  
Sbjct: 105 ------YHSSG------QRYCSNE----------GYRRKWGYVKVTMDGLVVGRKVCVLD 164

Query: 123 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 182
           HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+D +  WR+ GDVPW +F+E V+R
Sbjct: 165 HGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVER 180

Query: 183 LRIARKDE 191
           LRI R+++
Sbjct: 225 LRITRRND 180

[Close]

BLAST of Cp4.1LG01g13870 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 89.0 bits (219), Expect = 4.7e-18
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----- 144
           ++E ++  + V  K Q   ++KVNMDGV +GRKV +  H SY +LA  LEDMF R     
Sbjct: 112 DDEPKDVTKKVNGKVQ-VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 171

Query: 145 -----QCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
                Q    L+L +  SEF L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 172 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226

[Close]

BLAST of Cp4.1LG01g13870 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 89.0 bits (219), Expect = 4.7e-18
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----- 144
           ++E ++  + V  K Q   ++KVNMDGV +GRKV +  H SY +LA  LEDMF R     
Sbjct: 113 DDEPKDVTKKVNGKVQ-VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 172

Query: 145 -----QCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
                Q    L+L +  SEF L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 173 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227

[Close]

BLAST of Cp4.1LG01g13870 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 89.0 bits (219), Expect = 4.7e-18
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----- 144
           ++E ++  + V  K Q   ++KVNMDGV +GRKV +  H SY +LA  LEDMF R     
Sbjct: 112 DDEPKDVTKKVNGKVQ-VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 171

Query: 145 -----QCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
                Q    L+L +  SEF L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 172 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYC6	4.2e-35	44.50	Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=...	[more]
Q9C5X0	6.9e-30	39.36	Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=...	[more]
A2XB18	2.3e-17	44.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	2.3e-17	44.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
Q38831	6.7e-17	42.24	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]

BLAST of Cp4.1LG01g13870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513171.1	2.95e-145	100.00	auxin-responsive protein IAA32-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023513162.1	3.04e-143	99.00	auxin-responsive protein IAA32-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6601273.1	1.19e-140	97.50	Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032061.1	4.77e-139	97.01	Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022957191.1	1.57e-138	97.00	auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g13870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYJ4	7.59e-139	97.00	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1	[more]
A0A6J1J6Y8	7.83e-137	96.04	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1	[more]
A0A6J1GZV1	7.83e-137	96.04	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1	[more]
A0A6J1JFN3	8.07e-135	95.10	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1	[more]
A0A0A0KT91	1.17e-81	67.86	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g13870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01200.2	3.0e-36	44.50	indole-3-acetic acid inducible 32	[more]
AT1G15050.1	4.9e-31	39.36	indole-3-acetic acid inducible 34	[more]
AT2G33310.1	4.7e-18	42.24	auxin-induced protein 13	[more]
AT2G33310.2	4.7e-18	42.24	auxin-induced protein 13	[more]
AT2G33310.3	4.7e-18	42.24	auxin-induced protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 87..190 e-value: 1.1E-23 score: 84.3
None	No IPR available	GENE3D	3.10.20.90		coord: 96..195 e-value: 5.0E-28 score: 99.1
None	No IPR available	PANTHER	PTHR31734:SF114	AUXIN-RESPONSIVE PROTEIN IAA34	coord: 7..191
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 99..185
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..191
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 102..190 score: 19.707438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13870.1	Cp4.1LG01g13870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding