Cp4.1LG01g07570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g07570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Encodes a protein whose expression is responsive to nematode infection, putative
Location	Cp4.1LG01: 5378725 .. 5380044 (-)
RNA-Seq Expression	Cp4.1LG01g07570
Synteny	Cp4.1LG01g07570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGTCTCTTCTACTACGCCCACCATCTTCCTCTTCCCTCTTTCCAGCTCTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGTGAGAGTAACGATATTAGAGATGTTTGTTTAACACACGATGAACAAGAAAAAAAAAAAGTGGGGAGAGATTTCTCCCAGTTTATTCAGCTGGGTTGGGGACGGAAATTATATTCTCTATTCCACTCTGTAGTTATTTGAGTTACATTAGTTATGATTTATTTTGACATGAAGGCTCCACGGCGAGTACGGTCGGCGATCAACATGAGTGCGAAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGGTGCGCATGCACTGTCTTTTTTCTTTTTCTTTTTTAATTTAATTTTACTTGTCACTTCCATTTGTCATTAAGATTTACTAATTATTTTCGATGATAAAATTGAAATGATTTTCTTGGTTGAAAATGCAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAATTAACAAGGGCAACAAAAATCATAGACAAATTAATTGAAGTGACACAGTGACGTGACGATCTACTGAGAGTATTACGTTACGTCCTTCATTTCAACTTAAAACATTTGAATTTTGAACCGCTTTTGTAGAATATAGCTAGATATAGTTTCGTTTTTTTTTTTACGTCCATTATGTACTCATAAATAAATTAATGTTATATAAGTAGCTAGCTCCCGAGTCATGGAGAGCTTTTTTTAGCTCAATATATATAGTTTAATGTTTCACATTATATATTAATATAATTTTTACTTTATATGGGTCAAAGATAT

mRNA sequence

TGTGTCTCTTCTACTACGCCCACCATCTTCCTCTTCCCTCTTTCCAGCTCTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAATTAACAAGGGCAACAAAAATCATAGACAAATTAATTGAAGTGACACAGTGACGTGACGATCTACTGAGAGTATTACGTTACGTCCTTCATTTCAACTTAAAACATTTGAATTTTGAACCGCTTTTGTAGAATATAGCTAGATATAGTTTCGTTTTTTTTTTTACGTCCATTATGTACTCATAAATAAATTAATGTTATATAAGTAGCTAGCTCCCGAGTCATGGAGAGCTTTTTTTAGCTCAATATATATAGTTTAATGTTTCACATTATATATTAATATAATTTTTACTTTATATGGGTCAAAGATAT

Coding sequence (CDS)

ATGGGAAACACCTTTGGGCTCAAGAAGACGGTTAAGGTGATGACGGTCTCCGGTGACACGATCAAACTAACCCCCCCGGTTCAAGCTCGGGATGTCGTCAAGGACTATCCCGGCTTCGTTTTACTCGAATCTGAGGCTGTGAAACACTACGGAGTTCGAGCAAAGCCATTGGAACTCCACCAGAAGCTTAGCACGAAAAGACTCTATTTTCTTGTGGAGCTGCCTAAAGTTCCAAAAGAACAGGATAGGCTAGAGAGCTTGATGTTGTCACGGCGGTCAGCATCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGCAGAGGAGGGCGGTGAACAGAGAGAGGGATCGGAAGCGACACGGGTGAAGGTACGGCTGCCGAAGGCGGAGGTGGAAAGGGTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAGGATTATGGGGTTGTACATGGCCAAAGCTAGAGAAAGTGTTTGTCAAAATGAAAAGACGATGGAGAAGGAGAAGGATGTCATGATCAAGCCACGTGAGAAGCGACGAGTAAGTTTCATGACGACAATAGAAGCAATGCCTCAAATTGCGGTAGCAACTTAA

Protein sequence

MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELHQKLSTKRLYFLVELPKVPKEQDRLESLMLSRRSASDLTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKTMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT

Homology

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 76/183 (41.53%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MGNTFGLK-KTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  +K K  KVM + G+T ++  PV AR+V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------------QDRLESLMLSRRSASD 120
           +Q L  K+ YFLVELPK+P E                       ++RL+ LMLSRR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEA-AERIMGLYMAK 159
           +TI +       +G     G   T V++RLP++++ ++++E+ ++A A AE+I+G+YM +
Sbjct: 121 VTIGRSD---GGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

[Close]

BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: XP_023515798.1 (uncharacterized protein At1g66480 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362 bits (928), Expect = 3.47e-125
Identity = 199/213 (93.43%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKVPKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180

Query: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
           MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT
Sbjct: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 213

[Close]

BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: XP_022942789.1 (uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata])

HSP 1 Score: 354 bits (909), Expect = 2.73e-122
Identity = 194/213 (91.08%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE+ 
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNERK 180

Query: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREKRRVSFMTTIEAMPQIAVAT
Sbjct: 181 MEKEKDVIIKPREKRRVSFMTTIEAMPQIAVAT 213

[Close]

BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: XP_022942788.1 (uncharacterized protein At1g66480 isoform X1 [Cucurbita moschata])

HSP 1 Score: 349 bits (895), Expect = 4.12e-120
Identity = 194/216 (89.81%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE+ 
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNERK 180

Query: 181 MEKEKDVMIKPREK---RRVSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREK   RRVSFMTTIEAMPQIAVAT
Sbjct: 181 MEKEKDVIIKPREKMQKRRVSFMTTIEAMPQIAVAT 216

[Close]

BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: KAG7031458.1 (hypothetical protein SDJN02_05498, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344 bits (882), Expect = 3.55e-118
Identity = 190/213 (89.20%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKV KEQ              DRLESLMLSRRSASDLTIMK KSVL
Sbjct: 61  QKLSTKRLYFLVELPKVSKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKSKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKA E++CQNE  
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKATENLCQNEPK 180

Query: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
           MEKEKDVMIKPREKRRVSFMTT+EAMPQIAVAT
Sbjct: 181 MEKEKDVMIKPREKRRVSFMTTVEAMPQIAVAT 213

[Close]

BLAST of Cp4.1LG01g07570 vs. NCBI nr
Match: KAG6600820.1 (hypothetical protein SDJN03_06053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341 bits (874), Expect = 5.88e-117
Identity = 189/213 (88.73%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKV KEQ              DRLESLMLSRRSASDLTIMK KSVL
Sbjct: 61  QKLSTKRLYFLVELPKVSKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKSKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKA E++CQNE  
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKATENLCQNEPK 180

Query: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
           MEKEKDVMIKPREKRRVSFMTT+EAM QIAVAT
Sbjct: 181 MEKEKDVMIKPREKRRVSFMTTVEAMSQIAVAT 213

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL
Match: A0A6J1FSC9 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 354 bits (909), Expect = 1.32e-122
Identity = 194/213 (91.08%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE+ 
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNERK 180

Query: 181 MEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREKRRVSFMTTIEAMPQIAVAT
Sbjct: 181 MEKEKDVIIKPREKRRVSFMTTIEAMPQIAVAT 213

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL
Match: A0A6J1FVP5 (uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.00e-120
Identity = 194/216 (89.81%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE+ 
Sbjct: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNERK 180

Query: 181 MEKEKDVMIKPREK---RRVSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREK   RRVSFMTTIEAMPQIAVAT
Sbjct: 181 MEKEKDVIIKPREKMQKRRVSFMTTIEAMPQIAVAT 216

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL
Match: A0A6J1JB09 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484144 PE=4 SV=1)

HSP 1 Score: 330 bits (846), Expect = 5.43e-113
Identity = 184/214 (85.98%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGLKKT KVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGLKKTAKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKVPKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSEINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEG  ++EGSEATRVKVRLPKAEVERVLKES+DEAEAAERIMGLYMAKA E+VCQN + 
Sbjct: 121 AEEGSGEKEGSEATRVKVRLPKAEVERVLKESRDEAEAAERIMGLYMAKATENVCQNGQK 180

Query: 181 MEKEKDVMIKPREKRR-VSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREKRR VSFM TIEAMPQI V T
Sbjct: 181 MEKEKDVIIKPREKRRRVSFMATIEAMPQIEVTT 214

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL
Match: A0A6J1JDY8 (uncharacterized protein At1g66480 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484144 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.73e-112
Identity = 184/217 (84.79%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGLKKT KVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGLKKTAKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKVPKEQ              DRLESLMLSRRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSEINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNEKT 180
           AEEG  ++EGSEATRVKVRLPKAEVERVLKES+DEAEAAERIMGLYMAKA E+VCQN + 
Sbjct: 121 AEEGSGEKEGSEATRVKVRLPKAEVERVLKESRDEAEAAERIMGLYMAKATENVCQNGQK 180

Query: 181 MEKEKDVMIKPREK----RRVSFMTTIEAMPQIAVAT 199
           MEKEKDV+IKPREK    RRVSFM TIEAMPQI V T
Sbjct: 181 MEKEKDVIIKPREKMEKRRRVSFMATIEAMPQIEVTT 217

[Close]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL
Match: A0A1S3C0K8 (uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 3.32e-95
Identity = 165/215 (76.74%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG+KKTVKVM +SG+T+KL  PVQ  DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQ--------------DRLESLMLSRRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQ              DRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGEQREGSE--ATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQNE 180
            EEGG + EGS   ATRVKVRLPKAEVER+LKE KDEAEAAERIMGLY  K RESVC+N+
Sbjct: 121 TEEGGGESEGSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLY--KTRESVCEND 180

Query: 181 KTMEKEKDVMIKPREKRRVSFMTTIEAMPQIAVAT 199
              EKEK  +IKPREKRRVSFMTT+EA  QIAVA+
Sbjct: 181 HK-EKEKKDIIKPREKRRVSFMTTMEAGTQIAVAS 212

[Close]

BLAST of Cp4.1LG01g07570 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-37
Identity = 107/223 (47.98%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM + G+T KL  PV A +V+KD+PG VLL+SE+VKHYG RAKPLE  
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QKLSTKRLYFLVELPK--VPKE---------QDRLESLMLSRRSASDLTIMKPKSVLAEE 120
           Q+L  KRLYF+VE  K   P+          ++RLESLML+RRS+SDL+I+KP       
Sbjct: 61  QRLEAKRLYFVVEPVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKP------P 120

Query: 121 GG---EQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKAR-ESVCQNEK 180
           GG   E+ EG+   RVKVR+PKAE+E+++KE   EAEA ++I  L+MAK R E   QN +
Sbjct: 121 GGWTTEEEEGA-VRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQRQEEAYQNTR 180

Query: 181 TMEKEKDVM----------IKPREKRRVSFMTTIEAMPQIAVA 199
             E                +K R K RVSFM       +I VA
Sbjct: 181 QDEPATTATATATTTATRGVKSRLK-RVSFMAERGGGSEITVA 215

[Close]

BLAST of Cp4.1LG01g07570 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 80/165 (48.48%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 1   MGNTFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT  +M ++G++ KL  PV+A  VVKD+PG VLLESEAVK  G+RAKPLE H
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QKLSTKRLYFLVELPKVPKE--------------QDRLESLMLSRRSASDLTIMKPKSVL 120
           Q L +KR+YF+VELP+  KE              ++RLE+L LSRRS+SDL++MK K+  
Sbjct: 61  QNLESKRIYFMVELPRTWKERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKT-- 120

Query: 121 AEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGL 152
            E   E+RE S    VK++LPK ++E++ KES+  ++ + +I  L
Sbjct: 121 -EVNDEEREVSS---VKLKLPKWKIEKLRKESESGSDFSNKITQL 159

[Close]

BLAST of Cp4.1LG01g07570 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 76/183 (41.53%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MGNTFGLK-KTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  +K K  KVM + G+T ++  PV AR+V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------------QDRLESLMLSRRSASD 120
           +Q L  K+ YFLVELPK+P E                       ++RL+ LMLSRR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEA-AERIMGLYMAK 159
           +TI +       +G     G   T V++RLP++++ ++++E+ ++A A AE+I+G+YM +
Sbjct: 121 VTIGRSD---GGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

[Close]

BLAST of Cp4.1LG01g07570 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-26
Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 1   MGNTFGLKKT-VKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGNT  +++  VKVM + GD  +L  PV A D  K+YPGFVLL+SE VK  GVRAKPLE 
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKE-----------------QDRLESLMLSRRSASDLTIMKP 120
           +Q L     YFLV+LP V K                  ++RLE LMLSRR+ SD  +   
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSD--VGAA 120

Query: 121 KSVLAEEGGEQREGSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYM 154
           +S +  +G E       TRV++RLP++++ ++++ES D +E A +I+  YM
Sbjct: 121 RSDVVGDGPELGH----TRVRLRLPRSQITKLMEESHDASEVAAKIISAYM 165

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLC8	1.7e-28	41.53	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of Cp4.1LG01g07570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515798.1	3.47e-125	93.43	uncharacterized protein At1g66480 [Cucurbita pepo subsp. pepo]	[more]
XP_022942789.1	2.73e-122	91.08	uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata]	[more]
XP_022942788.1	4.12e-120	89.81	uncharacterized protein At1g66480 isoform X1 [Cucurbita moschata]	[more]
KAG7031458.1	3.55e-118	89.20	hypothetical protein SDJN02_05498, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600820.1	5.88e-117	88.73	hypothetical protein SDJN03_06053, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG01g07570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSC9	1.32e-122	91.08	uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1FVP5	2.00e-120	89.81	uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JB09	5.43e-113	85.98	uncharacterized protein At1g66480 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1JDY8	1.73e-112	84.79	uncharacterized protein At1g66480 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3C0K8	3.32e-95	76.74	uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of Cp4.1LG01g07570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01340.1	2.1e-37	47.98	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT1G71015.1	2.6e-32	48.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G66480.1	1.2e-29	41.53	plastid movement impaired 2	[more]
AT5G37840.1	8.1e-26	42.69	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..187
None	No IPR available	PANTHER	PTHR33148:SF3	PLASTID MOVEMENT IMPAIRED PROTEIN	coord: 1..187
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..157 e-value: 1.1E-17 score: 65.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07570.1	Cp4.1LG01g07570.1	mRNA