Cp4.1LG01g07400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g07400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG01: 5579884 .. 5580357 (+)
RNA-Seq Expression	Cp4.1LG01g07400
Synteny	Cp4.1LG01g07400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

mRNA sequence

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

Coding sequence (CDS)

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

Protein sequence

MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP

Homology

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK+DDLG   +   +  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQ-NGQLVFKDHWEM 156
             G +  + F DD+  +   CG  +C+WTAK DG+YL +  +G+ V    WE+
Sbjct: 98  DNGHMNVNVFWDDV-ILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK++DLG   +   D  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQN-GQLVFKDHWE 155
             G +    F DD+  +   C   +CVWTAK DG+YL +   G+ V  + W+
Sbjct: 98  DDGHMNVKVFWDDV-ILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 64  HCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW----AYGFVEFDAFADDLNF 123
           HC SKD+DL    V    + S+SFR ++  +T+F+C L+W     +GF  + A  DD   
Sbjct: 41  HCRSKDNDLQNQTVTSGHDMSFSFREDFFHTTHFYCDLQWDKETKFGFYSYQAKRDDDGR 100

Query: 124 VTTFCGDSSCVWTAKQDGVYLADQNGQL 148
            +     S C+W    DG+Y  DQ  Q+
Sbjct: 101 CS-----SQCLWKIMDDGLYGFDQEHQI 123

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.7e-08
Identity = 40/132 (30.30%), Postives = 55/132 (41.67%), Query Frame = 0


Query: 8   LLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL-LDSHCC 67
           L L +L+  ++  +S A  K     P  P          K  V I N L   L L  HC 
Sbjct: 8   LSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYHCK 67

Query: 68  SKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNF-VTTFCG 127
           SKDDDLG   + P +  S+SF   + G T + C   W      FD + D  +      C 
Sbjct: 68  SKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKCE 127

Query: 128 DSSCVWTAKQDG 138
              CVW  +++G
Sbjct: 128 SDRCVWKIRRNG 139

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           L+ HC S DDDLG+ ++ P+   S+ FR + +G+T F+C   W      FD + DD + V
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 121 TTFCGDSSCVWTAKQDG 138
            +     +C+W     G
Sbjct: 111 RSHISCINCIWDISIQG 127

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328 bits (842), Expect = 1.39e-113
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 60
           MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL
Sbjct: 7   MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 66

Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV
Sbjct: 67  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 126

Query: 121 TTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 157
           TTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP
Sbjct: 127 TTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 163

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: XP_022942056.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 309 bits (791), Expect = 7.81e-106
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 60
           MRRLPLLLLLL  LH VSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL
Sbjct: 7   MRRLPLLLLLL--LHPVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 66

Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           LDSHCCSKDDDLGV V+YPDDEQ WSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV
Sbjct: 67  LDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 126

Query: 121 TTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 157
           T+FCGDSSCVWTAKQDG+YLADQNGQLVFKDHWE++P
Sbjct: 127 TSFCGDSSCVWTAKQDGLYLADQNGQLVFKDHWELVP 161

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (780), Expect = 3.72e-104
Identity = 144/156 (92.31%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 2   RRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL 61
           RRLPLLLLLL   HLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL
Sbjct: 8   RRLPLLLLLL--FHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL 67

Query: 62  DSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVT 121
           DSHCCSKDDDLGV V+YPDDEQ WSFRGNWLGSTNFHCKLEWAYGFVEFDAF DDLNFVT
Sbjct: 68  DSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFDDDLNFVT 127

Query: 122 TFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 157
           +FCG+SSCVWTAKQDG+YLADQNGQLVFKDHWE++P
Sbjct: 128 SFCGNSSCVWTAKQDGLYLADQNGQLVFKDHWELVP 161

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: KAG7031483.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301 bits (771), Expect = 3.08e-100
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 2   RRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL 61
           RRLPLLLLLL   HLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL
Sbjct: 8   RRLPLLLLLL--FHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLL 67

Query: 62  DSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVT 121
           DSHCCSKDDDLGV V+YPDDEQ WSFRGNWLGSTNFHCKLEWAYGFVEFDAF DDLNFVT
Sbjct: 68  DSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFDDDLNFVT 127

Query: 122 TFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEM 155
           +FCG+SSCVWTAKQDG+YLADQNGQLVFKDHWE+
Sbjct: 128 SFCGNSSCVWTAKQDGLYLADQNGQLVFKDHWEL 159

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 204 bits (519), Expect = 1.10e-64
Identity = 85/130 (65.38%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 27  KKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWS 86
           K  ETGPE P P++P +   KF++ I N L+MYLLDSHC SKDDDLG  V+YP+DEQSWS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 87  FRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQ 146
           FRGNWLG+TNFHCKLEW  G++EFDAF++D+ F+T FC  SSC W+A+QDGVYL +QNGQ
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQNGQ 128

Query: 147 LVFKDHWEML 156
           +VF  +WEM+
Sbjct: 129 VVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 309 bits (791), Expect = 3.78e-106
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 60
           MRRLPLLLLLL  LH VSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL
Sbjct: 7   MRRLPLLLLLL--LHPVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL 66

Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           LDSHCCSKDDDLGV V+YPDDEQ WSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV
Sbjct: 67  LDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 126

Query: 121 TTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 157
           T+FCGDSSCVWTAKQDG+YLADQNGQLVFKDHWE++P
Sbjct: 127 TSFCGDSSCVWTAKQDGLYLADQNGQLVFKDHWELVP 161

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 5.30e-65
Identity = 85/130 (65.38%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 27  KKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWS 86
           K  ETGPE P P++P +   KF++ I N L+MYLLDSHC SKDDDLG  V+YP+DEQSWS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 87  FRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQ 146
           FRGNWLG+TNFHCKLEW  G++EFDAF++D+ F+T FC  SSC W+A+QDGVYL +QNGQ
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQNGQ 128

Query: 147 LVFKDHWEML 156
           +VF  +WEM+
Sbjct: 129 VVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 1.45e-52
Identity = 69/135 (51.11%), Postives = 101/135 (74.81%), Query Frame = 0


Query: 25  SKKKAETGPEQPD---PNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDD 84
           +KKKA+     P    PN P +   +F V I N LRM++LDSHC SKDDDLG+H+++PD+
Sbjct: 2   AKKKAKNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDE 61

Query: 85  EQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLA 144
           +Q WSF+GNW+ +T+FHC+LEW  G++EFD+F    +FVT +CG+ +C+W+A+QDGVYL 
Sbjct: 62  KQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLN 121

Query: 145 DQNGQLVFKDHWEML 156
           +  G+ VF ++WEM+
Sbjct: 122 NAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 170 bits (431), Expect = 2.86e-51
Identity = 81/163 (49.69%), Postives = 114/163 (69.94%), Query Frame = 0


Query: 1   MRRLPLLLLLLLLLHLVSLTMSVASK------KKAETGPEQPDPNQPAIALRKFDVHIRN 60
           MRR P+LLL+L+L+     +M   SK      K  +T P+   PN P  A  +F V I N
Sbjct: 3   MRR-PMLLLVLVLIAFSHFSMLTTSKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVEIHN 62

Query: 61  GLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFA 120
            LRM++LD+HC SKDDDLG+H+++PD+EQ WSF  NWLG+T FHC+LEW YG +EFDAF 
Sbjct: 63  DLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFDAFH 122

Query: 121 DDL-NFVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEML 156
            +  N +  +C +++C+W+A+QDGVYL +Q+  LVF ++W+ML
Sbjct: 123 SNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDML 164

[Close]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL
Match: A0A0A0KIQ4 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1)

HSP 1 Score: 143 bits (360), Expect = 7.67e-41
Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 9   LLLLLLHLVSLTMSVASKKKAETG---PEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHC 68
           LLL+LL L S  +S+A KKKA++    P+ PDPN P ++  KF V I N L MYLLDS C
Sbjct: 9   LLLVLLLLTSFNVSMAKKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDLNMYLLDSRC 68

Query: 69  CSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFC 124
            SKDD+ G+HV++PD++Q+WSF+GNW  +T FHC+LEW  G++EFD+F  D  FVT FC
Sbjct: 69  YSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSDPAFVTDFC 127

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK+DDLG   +   +  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQ-NGQLVFKDHWEM 156
             G +  + F DD+  +   CG  +C+WTAK DG+YL +  +G+ V    WE+
Sbjct: 98  DNGHMNVNVFWDDV-ILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.4 bits (150), Expect = 3.8e-10
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK++DLG   +   D  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQN-GQLVFKDHWE 155
             G +    F DD+  +   C   +CVWTAK DG+YL +   G+ V  + W+
Sbjct: 98  DDGHMNVKVFWDDV-ILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 45/142 (31.69%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 12  LLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGL-RMY-LLDSHCCSKD 71
           L + L+ + +SV S   ++  P             K  +H RN   R Y +L  HC SKD
Sbjct: 4   LFVLLIIIALSVGSNNGSKLWP-------------KNQLHFRNSFSRNYDVLTVHCKSKD 63

Query: 72  DDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYG---FVEFDAFADDLNFVTTFCGD 131
           DDLG+H V    E ++ F  +  G T F C L    G    V F A+     FV +    
Sbjct: 64  DDLGIHTVARSYEYNFKFEDSVFGRTEFFCTLMHGVGSKYSVTFTAYKAKPAFVAS--TG 123

Query: 132 SSCVWTAKQDGVYLADQNGQLV 149
              +W A  DG+YL D++   V
Sbjct: 124 VIKIWDALDDGIYLTDEDHDFV 130

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 40/132 (30.30%), Postives = 55/132 (41.67%), Query Frame = 0


Query: 8   LLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYL-LDSHCC 67
           L L +L+  ++  +S A  K     P  P          K  V I N L   L L  HC 
Sbjct: 8   LSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYHCK 67

Query: 68  SKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNF-VTTFCG 127
           SKDDDLG   + P +  S+SF   + G T + C   W      FD + D  +      C 
Sbjct: 68  SKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKCE 127

Query: 128 DSSCVWTAKQDG 138
              CVW  +++G
Sbjct: 128 SDRCVWKIRRNG 139

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 57.8 bits (138), Expect = 9.3e-09
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           L+ HC S DDDLG+ ++ P+   S+ FR + +G+T F+C   W      FD + DD + V
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 121 TTFCGDSSCVWTAKQDG 138
            +     +C+W     G
Sbjct: 111 RSHISCINCIWDISIQG 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.6e-10	36.28	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.3e-09	35.71	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q40975	4.5e-08	35.23	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]
F4JLQ5	7.7e-08	30.30	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	1.3e-07	33.77	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g07400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546843.1	1.39e-113	100.00	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942056.1	7.81e-106	93.63	S-protein homolog 1-like [Cucurbita moschata]	[more]
KAG6600848.1	3.72e-104	92.31	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7031483.1	3.08e-100	92.86	S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008453055.1	1.10e-64	65.38	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]

BLAST of Cp4.1LG01g07400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMU2	3.78e-106	93.63	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1	[more]
A0A1S3BUQ9	5.30e-65	65.38	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]
A0A0A0KL79	1.45e-52	51.11	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A6J1F5H5	2.86e-51	49.69	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A0A0KIQ4	7.67e-41	55.46	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g07400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.2e-11	36.28	S-protein homologue 1	[more]
AT4G29035.1	3.8e-10	35.71	Plant self-incompatibility protein S1 family	[more]
AT2G06090.1	3.2e-09	31.69	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	5.4e-09	30.30	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	9.3e-09	33.77	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 50..148 e-value: 1.6E-21 score: 76.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 34..143
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 34..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07400.1	Cp4.1LG01g07400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region