Cp4.1LG01g07390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g07390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG01: 5578075 .. 5578566 (+)
RNA-Seq Expression	Cp4.1LG01g07390
Synteny	Cp4.1LG01g07390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATTGCCTTGTTCGACACGTCGATGGCCAAAGGCAAGTTTAGTAAGAATAGAAACCAAGACGTAATCCCTAAACGACCATATTCACCACCAAGGACACCCCTGATTCAATTTCGTAAATATCAAATCGAGATTCATAATGACTTGAGAATGTTTATATTGGACAGTCGTTGTTACTCGAAAGATGATGATTTAGGGTTGCATATATTGTTCCCCGACGATCAACAAAACTGGACGTTTCGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATATGGGGAGTTGATATTTGATTCTTTTGTGAGTGATTATAATTTCTTGAACCGCCATTGTGGGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATGAAGTTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

mRNA sequence

ATGGCATCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATTGCCTTGTTCGACACGTCGATGGCCAAAGGCAAGTTTAGTAAGAATAGAAACCAAGACGTAATCCCTAAACGACCATATTCACCACCAAGGACACCCCTGATTCAATTTCGTAAATATCAAATCGAGATTCATAATGACTTGAGAATGTTTATATTGGACAGTCGTTGTTACTCGAAAGATGATGATTTAGGGTTGCATATATTGTTCCCCGACGATCAACAAAACTGGACGTTTCGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATATGGGGAGTTGATATTTGATTCTTTTGTGAGTGATTATAATTTCTTGAACCGCCATTGTGGGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATGAAGTTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

Coding sequence (CDS)

ATGGCATCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATTGCCTTGTTCGACACGTCGATGGCCAAAGGCAAGTTTAGTAAGAATAGAAACCAAGACGTAATCCCTAAACGACCATATTCACCACCAAGGACACCCCTGATTCAATTTCGTAAATATCAAATCGAGATTCATAATGACTTGAGAATGTTTATATTGGACAGTCGTTGTTACTCGAAAGATGATGATTTAGGGTTGCATATATTGTTCCCCGACGATCAACAAAACTGGACGTTTCGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATATGGGGAGTTGATATTTGATTCTTTTGTGAGTGATTATAATTTCTTGAACCGCCATTGTGGGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATGAAGTTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

Protein sequence

MASHKLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDMLL

Homology

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 55  QIEIHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRL-EWQYGE 114
           ++ I ND   ++L   C S+DDDLG HIL   +   W F  NF  +T + C   + Q  +
Sbjct: 47  RVTIQND-NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKK 106

Query: 115 LIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNE--VGQYVFYDY 159
            +F+ + ++ +F    C N  C W A +DG+Y  +E  V  Y+FY++
Sbjct: 107 GVFEIYRANRDFY--RCAN--CTWKAEKDGIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 32/98 (32.65%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 51  FRKYQIEIHNDLR-MFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEW 110
           F K  + + N++     L   C SKDDDLG H+L       W FR ++  TT F C+  W
Sbjct: 28  FAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCKFLW 87

Query: 111 QYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLT 148
                 FD++ SD +    HC +  C WS   D   ++
Sbjct: 88  NNNVKWFDTYRSDRD--QGHCYS--CNWSINADSACIS 121

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot
Match: P0DN94 (S-protein homolog 17 OS=Arabidopsis thaliana OX=3702 GN=SPH17 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-07
Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 55  QIEIHNDLRM-FILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGE 114
           +I I N+L+    L  RCYSKDD LG HI+         F  NF  TT+F+C L      
Sbjct: 23  RIRIANELKFKKNLWMRCYSKDDVLGPHIIPIGGHFLDYFGTNFWGTTRFMCTLRQGPNY 82

Query: 115 LIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYV 155
           + + SF + +   +      +  W AR+DG+YL  E  +++
Sbjct: 83  IHYQSFTA-FKLFSMEDHGGLWDWRAREDGIYLKKEGNKFI 122

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 53  KYQIEIHNDL----RMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLE 112
           ++Q+ + N L     +FI    C SK+DDLG   L   ++ +W F  N + +T F C + 
Sbjct: 40  EWQVTVVNGLTTGETLFI---HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 99

Query: 113 WQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEV-GQYVFYDYWDM 162
              G +  + F  D    +R CG   C W+A+ DG+YL N   G+ V    W++
Sbjct: 100 KDNGHMNVNVFWDDVILFHR-CGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06
Identity = 27/83 (32.53%), Postives = 38/83 (45.78%), Query Frame = 0


Query: 67  LDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFL 126
           L+  C S DDDLGL IL P+   ++ FR + + TT F C   W      FD +  D + +
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 127 NRHCGNSVCGWSARQDGVYLTNE 150
             H     C W     G  + +E
Sbjct: 111 RSHISCINCIWDISIQGPCMFSE 133

[Close]

BLAST of Cp4.1LG01g07390 vs. NCBI nr
Match: KGN51432.1 (hypothetical protein Csa_007732 [Cucumis sativus])

HSP 1 Score: 192 bits (487), Expect = 1.42e-59
Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 0


Query: 1   MASHKLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHN 60
           MA H LV LI L LI LFD SMA+  F+              P ++ +IQ   YQIEIHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMARFSFA--------------PQKSSIIQLHHYQIEIHN 60

Query: 61  DLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFV 120
           DL M++LDS C+SKD+DLGLHILFP + Q+W+F+ N  ETTKF C LEW+ G L FDSF 
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 120

Query: 121 SDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDMLL 163
           +++NFLN  CGN  C WSARQDGVYLTN  G+YVF DYWDML+
Sbjct: 121 TNHNFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDMLI 149

[Close]

BLAST of Cp4.1LG01g07390 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 188 bits (477), Expect = 5.90e-58
Identity = 89/158 (56.33%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 5   KLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRM 64
           +L  L+ +LL+A   TSMAK K +KN++    P    S P  P++ F ++ +EIHNDLRM
Sbjct: 4   RLTLLLVILLLAPLRTSMAKKK-AKNKS----PTPKLSVPNNPVVMFERFTVEIHNDLRM 63

Query: 65  FILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYN 124
           FILDS CYSKDDDLGLHILFPD++Q+W+F+ N++ TT F CRLEW+ G L FDSF S  +
Sbjct: 64  FILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPD 123

Query: 125 FLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDML 162
           F+  +CGN  C WSARQDGVYL N  G+ VFY+YW+M+
Sbjct: 124 FVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYWEMI 156

[Close]

BLAST of Cp4.1LG01g07390 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 170 bits (430), Expect = 1.05e-50
Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 1   MASHKLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRP---YSPPRTPLIQFRKYQIE 60
           MA  + + L+ L+LIA    SM     SKN N+   PK+    +  P  P   F ++ +E
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTT--SKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVE 60

Query: 61  IHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFD 120
           IHNDLRMFILD+ C SKDDDLGLHILFPD++Q+W+F  N++ TT+F CRLEWQYG L FD
Sbjct: 61  IHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFD 120

Query: 121 SFVSDY-NFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDML 162
           +F S+  N L  +C N+ C WSARQDGVYL N+    VFY+YWDML
Sbjct: 121 AFHSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDML 164

[Close]

BLAST of Cp4.1LG01g07390 vs. NCBI nr
Match: XP_008453057.1 (PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo])

HSP 1 Score: 159 bits (402), Expect = 5.04e-47
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 41  YSPPRTPLIQFRKYQIEIHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMET 100
           ++P +  +IQ R YQ++IHNDL M++LDS C+SKD+DLGLHILFP +QQ+W+F  N  ET
Sbjct: 8   FAPQKPSIIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFET 67

Query: 101 TKFICRLEWQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTN 148
           TKF CRLEW+ G L FDSF SD +FLN  CGN  C WSA+QDGVYLTN
Sbjct: 68  TKFRCRLEWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTN 115

[Close]

BLAST of Cp4.1LG01g07390 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158 bits (400), Expect = 3.53e-46
Identity = 73/151 (48.34%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 12  LLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRMFILDSRC 71
           LLL+ L   S+     SK +  +  P++P   P  P I  RK+ + I N LRM++LDS C
Sbjct: 15  LLLLLLHLVSLTMSVASKKK-AETGPEQP--DPNQPAIALRKFDVHIRNGLRMYLLDSHC 74

Query: 72  YSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFLNRHCG 131
            SKDDDLG+H+++PDD+Q+W+FR N++ +T F C+LEW YG + FD+F  D NF+   CG
Sbjct: 75  CSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCG 134

Query: 132 NSVCGWSARQDGVYLTNEVGQYVFYDYWDML 162
           +S C W+A+QDGVYL ++ GQ VF D+W+ML
Sbjct: 135 DSSCVWTAKQDGVYLADQNGQLVFKDHWEML 162

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1)

HSP 1 Score: 192 bits (487), Expect = 6.87e-60
Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 0


Query: 1   MASHKLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHN 60
           MA H LV LI L LI LFD SMA+  F+              P ++ +IQ   YQIEIHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMARFSFA--------------PQKSSIIQLHHYQIEIHN 60

Query: 61  DLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFV 120
           DL M++LDS C+SKD+DLGLHILFP + Q+W+F+ N  ETTKF C LEW+ G L FDSF 
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 120

Query: 121 SDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDMLL 163
           +++NFLN  CGN  C WSARQDGVYLTN  G+YVF DYWDML+
Sbjct: 121 TNHNFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDMLI 149

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 4.72e-55
Identity = 82/141 (58.16%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 22  MAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRMFILDSRCYSKDDDLGLH 81
           MAK K +KN++    P    S P  P++ F ++ +EIHNDLRMFILDS CYSKDDDLGLH
Sbjct: 1   MAKKK-AKNKS----PTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLH 60

Query: 82  ILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQ 141
           ILFPD++Q+W+F+ N++ TT F CRLEW+ G L FDSF S  +F+  +CGN  C WSARQ
Sbjct: 61  ILFPDEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQ 120

Query: 142 DGVYLTNEVGQYVFYDYWDML 162
           DGVYL N  G+ VFY+YW+M+
Sbjct: 121 DGVYLNNAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 170 bits (430), Expect = 5.10e-51
Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 1   MASHKLVFLIGLLLIALFDTSMAKGKFSKNRNQDVIPKRP---YSPPRTPLIQFRKYQIE 60
           MA  + + L+ L+LIA    SM     SKN N+   PK+    +  P  P   F ++ +E
Sbjct: 1   MAMRRPMLLLVLVLIAFSHFSMLTT--SKNNNKVPKPKKTKPKFLKPNNPNPAFERFTVE 60

Query: 61  IHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFD 120
           IHNDLRMFILD+ C SKDDDLGLHILFPD++Q+W+F  N++ TT+F CRLEWQYG L FD
Sbjct: 61  IHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTEFHCRLEWQYGLLEFD 120

Query: 121 SFVSDY-NFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYWDML 162
           +F S+  N L  +C N+ C WSARQDGVYL N+    VFY+YWDML
Sbjct: 121 AFHSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDML 164

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL
Match: A0A1S3BVC0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493879 PE=3 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.44e-47
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 41  YSPPRTPLIQFRKYQIEIHNDLRMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMET 100
           ++P +  +IQ R YQ++IHNDL M++LDS C+SKD+DLGLHILFP +QQ+W+F  N  ET
Sbjct: 8   FAPQKPSIIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFET 67

Query: 101 TKFICRLEWQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTN 148
           TKF CRLEW+ G L FDSF SD +FLN  CGN  C WSA+QDGVYLTN
Sbjct: 68  TKFRCRLEWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTN 115

[Close]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 2.39e-46
Identity = 70/134 (52.24%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 29  KNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRMFILDSRCYSKDDDLGLHILFPDDQ 88
           K ++Q+  P+ P   P  PL+ F K+ I I+N+L+M++LDS CYSKDDDLG  +L+P+D+
Sbjct: 7   KIKSQETGPELP--KPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDE 66

Query: 89  QNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTN 148
           Q+W+FR N++ TT F C+LEW+ G L FD+F +D  FL   C  S C WSARQDGVYLTN
Sbjct: 67  QSWSFRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTN 126

Query: 149 EVGQYVFYDYWDML 162
           + GQ VF   W+M+
Sbjct: 127 QNGQVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG01g07390 vs. TAIR 10
Match: AT3G27331.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.5 bits (132), Expect = 4.8e-08
Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 56  IEIHNDLR-MFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGEL 115
           I I N+L+   +L  RCYSKDD LG  I+         F  NF  TT+F+C L       
Sbjct: 16  IRISNELKNKKLLWMRCYSKDDVLGPKIIPIGQHYENLFDINFWHTTRFMCTLRQGPNFR 75

Query: 116 IFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYW 160
            + +F +   F     G  +  W AR++G+YL  E G+ V    W
Sbjct: 76  HYQNFTAFKLFAMADEG-GLWDWRARENGIYLKKEAGEKVLNPIW 119

[Close]

BLAST of Cp4.1LG01g07390 vs. TAIR 10
Match: AT3G27329.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.5 bits (132), Expect = 4.8e-08
Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 56  IEIHNDLR-MFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGEL 115
           I I N+L+   +L  RCYSKDD LG  I+         F  NF  TT+F+C L       
Sbjct: 10  IRISNELKNKKLLWMRCYSKDDVLGPKIIPIGQHYENLFDINFWHTTRFMCTLRQGPNFR 69

Query: 116 IFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEVGQYVFYDYW 160
            + +F +   F     G  +  W AR++G+YL  E G+ V    W
Sbjct: 70  HYQNFTAFKLFAMADEG-GLWDWRARENGIYLKKEAGEKVLNPVW 113

[Close]

BLAST of Cp4.1LG01g07390 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 53  KYQIEIHNDL----RMFILDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLE 112
           ++Q+ + N L     +FI    C SK+DDLG   L   ++ +W F  N + +T F C + 
Sbjct: 40  EWQVTVVNGLTTGETLFI---HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 99

Query: 113 WQYGELIFDSFVSDYNFLNRHCGNSVCGWSARQDGVYLTNEV-GQYVFYDYWDM 162
              G +  + F  D    +R CG   C W+A+ DG+YL N   G+ V    W++
Sbjct: 100 KDNGHMNVNVFWDDVILFHR-CGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG01g07390 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 27/83 (32.53%), Postives = 38/83 (45.78%), Query Frame = 0


Query: 67  LDSRCYSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSDYNFL 126
           L+  C S DDDLGL IL P+   ++ FR + + TT F C   W      FD +  D + +
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 127 NRHCGNSVCGWSARQDGVYLTNE 150
             H     C W     G  + +E
Sbjct: 111 RSHISCINCIWDISIQGPCMFSE 133

[Close]

BLAST of Cp4.1LG01g07390 vs. TAIR 10
Match: AT1G26797.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 51.6 bits (122), Expect = 6.9e-07
Identity = 32/111 (28.83%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 12  LLLIALFDTSMAKGKFSKNRNQDVIPKRPYSPPRTPLIQFRKYQIEIHNDLRMFILDSRC 71
           + ++ +F TS+A   FS      V    P+SP    +I        +H   ++++    C
Sbjct: 3   ITVLVIFKTSLAFENFS-----SVDGNFPFSPKHVIIIN------TLHPHGKLYV---HC 62

Query: 72  YSKDDDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGELIFDSFVSD 123
            +K +DLGLH +   +Q ++ FR N   TT + C+  W   E  FD F +D
Sbjct: 63  RNKGEDLGLHKIEYREQIDFRFRVNLRRTTTYTCKFSWPGNEKTFDIFRAD 99

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DN92	5.5e-09	33.64	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
P0DN93	3.0e-07	32.65	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
P0DN94	3.9e-07	33.66	S-protein homolog 17 OS=Arabidopsis thaliana OX=3702 GN=SPH17 PE=3 SV=1	[more]
F4JLS0	2.0e-06	31.58	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q9FMQ4	4.4e-06	32.53	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g07390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51432.1	1.42e-59	58.28	hypothetical protein Csa_007732 [Cucumis sativus]	[more]
KAE8648167.1	5.90e-58	56.33	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
XP_022933678.1	1.05e-50	53.61	S-protein homolog 2-like [Cucurbita moschata]	[more]
XP_008453057.1	5.04e-47	63.89	PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo]	[more]
XP_023546843.1	3.53e-46	48.34	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG01g07390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSN2	6.87e-60	58.28	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1	[more]
A0A0A0KL79	4.72e-55	58.16	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A6J1F5H5	5.10e-51	53.61	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A1S3BVC0	2.44e-47	63.89	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493879 PE=3 SV=1	[more]
A0A1S3BUQ9	2.39e-46	52.24	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g07390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27331.1	4.8e-08	34.29	Plant self-incompatibility protein S1 family	[more]
AT3G27329.1	4.8e-08	34.29	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	1.4e-07	31.58	S-protein homologue 1	[more]
AT5G12060.1	3.1e-07	32.53	Plant self-incompatibility protein S1 family	[more]
AT1G26797.1	6.9e-07	28.83	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 55..153 e-value: 4.2E-20 score: 72.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 46..156
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 46..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07390.1	Cp4.1LG01g07390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region