Cp4.1LG01g03790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCGATACCACTCCCCTCGAATTCGGCGGCGAGAGTGACGGCGGCCGTCGATGCGGCAAGTCTTCCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAATCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAA ATGGCCATCGATACCACTCCCCTCGAATTCGGCGGCGAGAGTGACGGCGGCCGTCGATGCGGCAAGTCTTCCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAATCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAA ATGGCCATCGATACCACTCCCCTCGAATTCGGCGGCGAGAGTGACGGCGGCCGTCGATGCGGCAAGTCTTCCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAATCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAA MAIDTTPLEFGGESDGGRRCGKSSSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIESESAMKSLRKRSNRRPETFDCFEFLKFVWCFIF Homology
BLAST of Cp4.1LG01g03790 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130 bits (326), Expect = 4.62e-37 Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126 bits (317), Expect = 1.03e-33 Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126 bits (317), Expect = 3.87e-33 Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus]) HSP 1 Score: 112 bits (281), Expect = 2.72e-30 Identity = 58/94 (61.70%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (255), Expect = 2.49e-26 Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 1.32e-30 Identity = 58/94 (61.70%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of Cp4.1LG01g03790 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 1.21e-26 Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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