Cp4.1LG01g01360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g01360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	trihelix transcription factor GT-3b-like
Location	Cp4.1LG01: 3024161 .. 3028506 (+)
RNA-Seq Expression	Cp4.1LG01g01360
Synteny	Cp4.1LG01g01360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAGAAAAACAATGTCTTATCAAGTGATCAAAAGTCATAGGTGGACGAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTTAAGAAGCAAGCCGGAAAAGGCCGATAATGGAATGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCATCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGTTCGTCCAGTTTCCATTCCGTATTCATTTGAGGATTTTTTTTTTTTTAATCAGTCTGTTCTCCGTTATGTTTCTTTCAAGTGGGCTCCTCTGAATCTGGACTGTTCTTGCTTTGATATTTTGATTCTCATGGATTTCGATTGGGTTCAATTTTGCCATTTATGGTTGCAAATTCTTAAAGCTAAATCTGAGAAAGGTAGTAAAATGCTGATAATGTCTCGCAACATGCGGACGAGAAAATGACAAGATGTCATAAAGTCTTTATTCAAAATAGACACGTTTTGACCTTTCAAAACTCTAGCTGCCTGTAATTGCCTGTAAGAGGAGGTTTGGAGAAAATGGTTAGAATTGAAGGGTATTGCTAAGAGGTAGCTACCATTGTTTTTGGAGATTTGTCTCGCAAAATGGCTTTCTTCATTTCTAGGAGTACATATCAACTCAGACACGGTGGCAAAATTAGATATCTGTTGACTACTTGTACAAGATACATCATTCTACTTAATTTCCTAGGTGTATGTTTTGTCAAAGTGTGGTAATGCTTCCATTTCCAGTCTTGTTTCTGTCCAATCTTCTTGTCGAAGTGATAAGAGATTCTTGACTGTGCCTCCTCTAGAATCTAGAAAATCTGGCTGTTCTTAAGTTTTCTCTTATAGATCTTTCTTACACAATCTCTTAGTTACCTGTGAATGGTCAGCCTTTCAATTCTAATCTCTTAGTTACCCCAATGGATGAAAAGCCGAAGTTGATTCCAAAAGGCTTTCTGGTTAACATTTAATGGAATTTGGTTCTCAGATTTCATTCTGAACAAAGACCTGTCCACGAACCATAGCCAAAGACTGCATTGCGCTGCATTATCTTATCACCTTACCATAATGAATGTGTGGCCAGCAAGAAGTTGAAGGAGATAGCCACAGAATTATGGAAAAAACTAGAAGGCAGTGATACCTTCTCCTATATTTCTGATAGGCTGCATCATAGAGGGGATAAGCAGACTTCAGGCTTAGGTTTATTTAACTTGATATTGTTACAAGTGTTAAGTTACCAAGAGCTACATGCACCAGACAAAGAACTTGACTTTGTTTTGACACTTCAGCTTCGTGAAGATGCGGGATTCACATGATGGGAAGAGGGGTAGAAGTTAGAATTAGTAAGAAGGTGATTGAAGAGGGATTCCACATCGGTTGGAGAGGAGAACAAAGCATTCTTTATAAAACCTTGAGGGGAAGCCCGAAAGGGAAATTCCAAAGAGGACTATCTGCTAGCGGTGGCTTTGGCCGTTACAAATGGTATCAGAGTCAGACACCAGGCGATTTGCCAACGAGGAGGTTGAGCCCCGAAGGGGGGTGGGCATGAGGCGGTGTGCCAGTAAGGACACTGGGCCTCGAAGGGGGTAGATTGGGGAGTCTCACATTGTTTGAAGAAGGGAATGAGTGCCAGCAAGGATACTGAGTCTCGAAGGGGGGTGGATTGTCAGATCCCACATTGGTTGAGGAGGATAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGTGTTTTAAAAACTTTGAGGGGAAGCTCGAAAGGGAAAACCCAAAAAGGACAATATCTGCTAGCAATGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGAAATCGGGCGGTGTGCCATTGAGGACGTTGAGCTTCGAAGGAGTGTGGATTGTGAGATCCCACATCGAATGGAGAGGAGAACGAAGCGTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGAAGCGTTTTAAAAACCTTGAGGGGAAGCTCAGAAGGAAAAATCCAAAAATGACAATATCTGCTAGCAGTGAGCTTGAGTCGTTACATTAACATGTGGAAAAAAGTTCAAAGAAAACAATATCTGCTAGAAGTGAGCTTGGGCCGTTACATTAACATGTGGAAAAAAGCTCAAAGAGGACAATATCTGCTAGCAGTGATCTTGGGCCGTTACATTAACACGTGAAAAAAAACCAGATATATGTCATTCTAACTCTTGTTTTATCCATGAGATCAATGAGCTCCTATGATAAAAACAAGCGCAGTTAATTCAGGAAGTTTCTCGTTCACTAAAACCCATCTTAACTGAGCTTCCTGCTCTCTCTTTAAAGCACCTTCTTAAACTAAAGTTTCCAAACAAGAACTTGCAGTGCCATTACAGTTCAAACATCGAGTGTGGTCTACATTGCGAGTGAAAAATTAACCTGAACCCTTTCTTTATGTGGGAGGTTGGTCATAAGTGGCGAAACATTTAATTGCTTCCCATATATGCAGTAATTCTCGTTCATTAGTATTTGTAGAAAAGACATCTTTTACTTTTAGATCCGTTTCATGTAATTCCGACTAAACTCTTCATAGAATTGTAGTAATAACATAGCCTAGAATTAGTTTGACTTGTCAAGTCCAATTTTGGCCCCAAAACTCAATGAGCTAAAGATACCCCTAGAAGTTGAGGCAGTTGGCATTGTTTATGTTGTTTAATCACCGTCATATGCTTCTAATTTTATAATGGTTGTACAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGAGACGATGAGATAAAAAACGGTACTGATTCCCGAGAATGAGATATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGATTTGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGCTCTTGGAAGAAAAAAGAATACATTGTTATGTACATTATCAGTATTGAAGAAAACCTATGAAGTTTAGCTTGAATTAAGAATCTTATTACTATGATCACCTTCCTATTCTCTTCTGTGATGATTAGCCTATTCATTTGTATCATTTTATGCTGGAAACAAGGCCATTTCTTTCAAGGATTCCATATTTTCTAAGGCACAGAGAAAATTAGACTGGGAATGTGGAATAAGCATGCTAGAGTTTGGTTTATTTTACAAGTGACGGAACAAATCATCATTCTTTCTAGTACATTTTAAGAACAATAAATATGAAGACAATACCAGCAACTTTCATTGATCTGAACATAAGAGAACTTCGAAATGCCTTCAATATGTAGTGGCACACATACTTCAACGTGCAAGCGACGATTCAGCCCGATTCTGATGGTGGCTTTTCCTTTGGATGTTTGGAGGCATAATGATCGCCCAATTGATTATGATTTGCTAGTTGTACCTG

mRNA sequence

AAAGGAAGAAAAACAATGTCTTATCAAGTGATCAAAAGTCATAGGTGGACGAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTTAAGAAGCAAGCCGGAAAAGGCCGATAATGGAATGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCATCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGAGACGATGAGATAAAAAACGGTACTGATTCCCGAGAATGAGATATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGATTTGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGCTCTTGGAAGAAAAAAGAATACATTGTTATGTACATTATCAGTATTGAAGAAAACCTATGAAGTTTAGCTTGAATTAAGAATCTTATTACTATGATCACCTTCCTATTCTCTTCTGTGATGATTAGCCTATTCATTTGTATCATTTTATGCTGGAAACAAGGCCATTTCTTTCAAGGATTCCATATTTTCTAAGGCACAGAGAAAATTAGACTGGGAATGTGGAATAAGCATGCTAGAGTTTGGTTTATTTTACAAGTGACGGAACAAATCATCATTCTTTCTAGTACATTTTAAGAACAATAAATATGAAGACAATACCAGCAACTTTCATTGATCTGAACATAAGAGAACTTCGAAATGCCTTCAATATGTAGTGGCACACATACTTCAACGTGCAAGCGACGATTCAGCCCGATTCTGATGGTGGCTTTTCCTTTGGATGTTTGGAGGCATAATGATCGCCCAATTGATTATGATTTGCTAGTTGTACCTG

Coding sequence (CDS)

ATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGA

Protein sequence

MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL

Homology

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BLAST of Cp4.1LG01g01360 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-35
Identity = 112/278 (40.29%), Postives = 161/278 (57.91%), Query Frame = 0


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L  D T + T      + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGEL--DQTFMET-----KRNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLLEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKR 182
           G   T    R+R   EYS  +E  EE   EE+   SN    K +  +      R  GS  
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDP--KILNPKKNIAKKRKGGS-- 209

Query: 183 SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTE 242
           +SS+ +N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+LE+ERL  E
Sbjct: 210 NSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAME 269

Query: 243 KAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           + WR+REEQR+ R+++RA+  D+L+  LL KL R+ +L
Sbjct: 270 RMWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.0e-31
Identity = 98/276 (35.51%), Postives = 153/276 (55.43%), Query Frame = 0


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L  D T + T      + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREEL--DQTFMET-----KRNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M    L  EA   +T  + + 
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM----LWSEATEPSTSSKRKH 170

Query: 134 RSLEEYSDLKELDE--EESEEEIPTQSNSQK--------GKAIGTQYPAKSLRTAGSKRS 193
                  + +E+DE  ++  EE+ +   +QK          +   +  AK  +   S   
Sbjct: 171 HQFSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTK 230

Query: 194 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEK 253
           + +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +LE ER  TE+
Sbjct: 231 AETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATER 290

Query: 254 AWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENN 279
            W EREE+R+ R++ RAQ  D+L+  LLN+LNR++N
Sbjct: 291 RWMEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.3e-05
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           +W + E    IRIR +LE +     T       K  LW+  SA MR  G+ R+A +CK K
Sbjct: 397 RWPKTEVEALIRIRKNLEANYQENGT-------KGPLWEEISAGMRRLGYNRSAKRCKEK 456

Query: 74  WKNLLSRYKGKETTHKE---FGWQCPFFEEIRAVFAVREKAMHR-----LLLEPEAG--- 133
           W+N+   +K  + ++K+       CP+F ++ A++  R K+        L++ P+     
Sbjct: 457 WENINKYFKKVKESNKKRPLDSKTCPYFHQLEALYNERNKSGAMPLPLPLMVTPQRQLLL 516

Query: 134 SSATKKRGRERSLEEYSDLKELDEEESEEE 153
           S  T+        E+  D ++ +E ESEE+
Sbjct: 517 SQETQTEFETDQREKVGDKEDEEEGESEED 539

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: XP_023512151.1 (trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533 bits (1372), Expect = 2.02e-190
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
           RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT
Sbjct: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: KAG7031071.1 (Trihelix transcription factor GT-3a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510 bits (1314), Expect = 1.35e-181
Identity = 269/279 (96.42%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWSEEETREFIRIRADLERDLT VSTGEGAAVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRL+ EPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLIHEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGT +PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGT-HPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
            SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKLERERLM 
Sbjct: 181 SSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLERERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: KAG6600412.1 (Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510 bits (1313), Expect = 1.92e-181
Identity = 269/279 (96.42%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWSEEETREFIRIRADLERDLT VSTGEGAAVKK+TLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKRTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLL EPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGT +PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGT-HPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
            SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKLERERLM 
Sbjct: 181 SSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLERERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: XP_022982252.1 (trihelix transcription factor GT-3b-like [Cucurbita maxima])

HSP 1 Score: 508 bits (1309), Expect = 7.81e-181
Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWS+EETREFIRIRADLERDL AVSTGEG AVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSDEETREFIRIRADLERDLMAVSTGEGVAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFA REKAMHRLLLEPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAAREKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEE+SDLKELDEEESEEEIPTQSNSQKGKAIGT  PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEFSDLKELDEEESEEEIPTQSNSQKGKAIGT-LPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
           RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKLERERLM 
Sbjct: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLERERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: XP_022942274.1 (trihelix transcription factor GT-3b-like [Cucurbita moschata])

HSP 1 Score: 507 bits (1305), Expect = 3.18e-180
Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWSEEETREFIRIRADLERDLT VSTGEGAAVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLL EPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEEYS+LKELDEEESEEEIPTQSNSQKGKAIGT +PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGT-HPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
            SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKL RERLM 
Sbjct: 181 SSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL
Match: A0A6J1IW60 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111481131 PE=4 SV=1)

HSP 1 Score: 508 bits (1309), Expect = 3.78e-181
Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWS+EETREFIRIRADLERDL AVSTGEG AVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSDEETREFIRIRADLERDLMAVSTGEGVAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFA REKAMHRLLLEPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAAREKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEE+SDLKELDEEESEEEIPTQSNSQKGKAIGT  PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEFSDLKELDEEESEEEIPTQSNSQKGKAIGT-LPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
           RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKLERERLM 
Sbjct: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLERERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL
Match: A0A6J1FQU1 (trihelix transcription factor GT-3b-like OS=Cucurbita moschata OX=3662 GN=LOC111447368 PE=4 SV=1)

HSP 1 Score: 507 bits (1305), Expect = 1.54e-180
Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTSSAMAATAQQHQWSEEETREFIRIRADLERDLT VSTGEGAAVKKKTLWDMASARMRE
Sbjct: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLL EPE
Sbjct: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSK 180
           AGSSATKKRGRERSLEEYS+LKELDEEESEEEIPTQSNSQKGKAIGT +PAKS RTAGSK
Sbjct: 121 AGSSATKKRGRERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGT-HPAKSSRTAGSK 180

Query: 181 RSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMT 240
            SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRM EQEWRDSMEKL RERLM 
Sbjct: 181 SSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
           EKAWREREEQRKKRQDIRA+GMDALLTDLLNKLNRENNL
Sbjct: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 278

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL
Match: A0A6J1C4P6 (trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC111008249 PE=4 SV=1)

HSP 1 Score: 430 bits (1105), Expect = 5.40e-150
Identity = 232/280 (82.86%), Postives = 249/280 (88.93%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           M+SSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEG A KKKTLW+MASARMRE
Sbjct: 5   MSSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGPATKKKTLWEMASARMRE 64

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           RGFWRTA QCKCKWKNLLSRYKGKET+HK+FGWQCPFFEEI AVFA R KAM RLLLEPE
Sbjct: 65  RGFWRTADQCKCKWKNLLSRYKGKETSHKDFGWQCPFFEEIHAVFAERGKAMQRLLLEPE 124

Query: 121 AGSSATKKRGRERSLEE-YSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGS 180
           AGS  TKKR RERSL+E YSDLKE +E+ESEEE+ TQS+SQK KAI T  PAKS R   S
Sbjct: 125 AGSMMTKKRARERSLDEGYSDLKEHNEDESEEEMATQSHSQKKKAIRT-LPAKSSRATDS 184

Query: 181 KRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLM 240
           K SSSS SNEILE+LKG+FQWQQRME+EWREILE HYN RR+ EQEWRDSMEKLERERLM
Sbjct: 185 KSSSSSTSNEILEMLKGYFQWQQRMELEWREILEIHYNKRRLFEQEWRDSMEKLERERLM 244

Query: 241 TEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
            E+AWREREE+R+KRQDIRA+GMDALL  LLNKL R NNL
Sbjct: 245 AEQAWREREEERRKRQDIRAEGMDALLKTLLNKLERGNNL 283

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL
Match: A0A5D3CYD0 (Trihelix transcription factor GT-3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003130 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.57e-147
Identity = 226/280 (80.71%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTS+AMAAT  QHQWSEEETREFIRIRADLE+DLTAVSTGE  A KKKTLW+MAS RMRE
Sbjct: 1   MTSTAMAATLHQHQWSEEETREFIRIRADLEKDLTAVSTGEAPAAKKKTLWEMASVRMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           +GFWRTA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLLLEPE
Sbjct: 61  KGFWRTADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIP-TQSNSQKGKAIGTQYPAKSLRTAGS 180
           A S +TKKRGRERSLEE+SDLKEL+E+E+EEE+  TQ NSQK KA   + PAKSL    S
Sbjct: 121 ACSISTKKRGRERSLEEHSDLKELNEDETEEEVTLTQRNSQKRKAA-RKLPAKSLGATDS 180

Query: 181 KRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLM 240
           K SSSS+S EI E+LKGF QWQQRMEMEWREI+ERHYNNRRMLEQEWR+SMEKLERERLM
Sbjct: 181 KSSSSSISYEIQEMLKGFLQWQQRMEMEWREIVERHYNNRRMLEQEWRESMEKLERERLM 240

Query: 241 TEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
            E+AWREREEQRK++QDIRA+GM+ALLT LLNKLN ENNL
Sbjct: 241 AEQAWREREEQRKEKQDIRAEGMNALLTTLLNKLNHENNL 279

[Close]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL
Match: A0A1S3BSN5 (trihelix transcription factor GT-3b-like OS=Cucumis melo OX=3656 GN=LOC103493063 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.57e-147
Identity = 226/280 (80.71%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTS+AMAAT  QHQWSEEETREFIRIRADLE+DLTAVSTGE  A KKKTLW+MAS RMRE
Sbjct: 1   MTSTAMAATLHQHQWSEEETREFIRIRADLEKDLTAVSTGEAPAAKKKTLWEMASVRMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           +GFWRTA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLLLEPE
Sbjct: 61  KGFWRTADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIP-TQSNSQKGKAIGTQYPAKSLRTAGS 180
           A S +TKKRGRERSLEE+SDLKEL+E+E+EEE+  TQ NSQK KA   + PAKSL    S
Sbjct: 121 ACSISTKKRGRERSLEEHSDLKELNEDETEEEVTLTQRNSQKRKAA-RKLPAKSLGATDS 180

Query: 181 KRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLM 240
           K SSSS+S EI E+LKGF QWQQRMEMEWREI+ERHYNNRRMLEQEWR+SMEKLERERLM
Sbjct: 181 KSSSSSISYEIQEMLKGFLQWQQRMEMEWREIVERHYNNRRMLEQEWRESMEKLERERLM 240

Query: 241 TEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 279
            E+AWREREEQRK++QDIRA+GM+ALLT LLNKLN ENNL
Sbjct: 241 AEQAWREREEQRKEKQDIRAEGMNALLTTLLNKLNHENNL 279

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-36
Identity = 112/278 (40.29%), Postives = 161/278 (57.91%), Query Frame = 0


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L  D T + T      + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGEL--DQTFMET-----KRNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLLEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKR 182
           G   T    R+R   EYS  +E  EE   EE+   SN    K +  +      R  GS  
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDP--KILNPKKNIAKKRKGGS-- 209

Query: 183 SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTE 242
           +SS+ +N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+LE+ERL  E
Sbjct: 210 NSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAME 269

Query: 243 KAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           + WR+REEQR+ R+++RA+  D+L+  LL KL R+ +L
Sbjct: 270 RMWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-32
Identity = 98/276 (35.51%), Postives = 153/276 (55.43%), Query Frame = 0


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L  D T + T      + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREEL--DQTFMET-----KRNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M    L  EA   +T  + + 
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM----LWSEATEPSTSSKRKH 170

Query: 134 RSLEEYSDLKELDE--EESEEEIPTQSNSQK--------GKAIGTQYPAKSLRTAGSKRS 193
                  + +E+DE  ++  EE+ +   +QK          +   +  AK  +   S   
Sbjct: 171 HQFSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTK 230

Query: 194 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEK 253
           + +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +LE ER  TE+
Sbjct: 231 AETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATER 290

Query: 254 AWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENN 279
            W EREE+R+ R++ RAQ  D+L+  LLN+LNR++N
Sbjct: 291 RWMEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR 10
Match: AT5G47660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 6.9e-07
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           +W +EE +  I  R+D+E         E   + K  +WD  SARM+ERG+ R+A +CK K
Sbjct: 303 RWPQEEVQALISSRSDVE---------EKTGINKGAIWDEISARMKERGYERSAKKCKEK 362

Query: 74  WKNLLSRYK 83
           W+N+   Y+
Sbjct: 363 WENMNKYYR 362

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 29/101 (28.71%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 15  WSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCKW 74
           W+++ETR  I +R +++            +   K LW+  S +MRE+GF R+   C  KW
Sbjct: 55  WAQDETRTLISLRREMDNLF-------NTSKSNKHLWEQISKKMREKGFDRSPSMCTDKW 114

Query: 75  KNLLSRYKGKETTHKE-----FGWQCPFFEEIRAVFAVREK 111
           +N+L  +K K   H++        +  ++ EI  +F  R+K
Sbjct: 115 RNILKEFK-KAKQHEDKATSGGSTKMSYYNEIEDIFRERKK 147

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR 10
Match: AT1G76890.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.5e-06
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           +W + E    IRIR +LE +     T       K  LW+  SA MR  G+ R+A +CK K
Sbjct: 397 RWPKTEVEALIRIRKNLEANYQENGT-------KGPLWEEISAGMRRLGYNRSAKRCKEK 456

Query: 74  WKNLLSRYKGKETTHKE---FGWQCPFFEEIRAVFAVREKAMHR-----LLLEPEAG--- 133
           W+N+   +K  + ++K+       CP+F ++ A++  R K+        L++ P+     
Sbjct: 457 WENINKYFKKVKESNKKRPLDSKTCPYFHQLEALYNERNKSGAMPLPLPLMVTPQRQLLL 516

Query: 134 SSATKKRGRERSLEEYSDLKELDEEESEEE 153
           S  T+        E+  D ++ +E ESEE+
Sbjct: 517 SQETQTEFETDQREKVGDKEDEEEGESEED 539

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80450	2.0e-35	40.29	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=...	[more]
Q9SDW0	3.0e-31	35.51	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=...	[more]
Q39117	6.3e-05	28.67	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 ...	[more]

BLAST of Cp4.1LG01g01360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512151.1	2.02e-190	100.00	trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo]	[more]
KAG7031071.1	1.35e-181	96.42	Trihelix transcription factor GT-3a [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600412.1	1.92e-181	96.42	Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022982252.1	7.81e-181	96.06	trihelix transcription factor GT-3b-like [Cucurbita maxima]	[more]
XP_022942274.1	3.18e-180	96.06	trihelix transcription factor GT-3b-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g01360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IW60	3.78e-181	96.06	trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FQU1	1.54e-180	96.06	trihelix transcription factor GT-3b-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1C4P6	5.40e-150	82.86	trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5D3CYD0	2.57e-147	80.71	Trihelix transcription factor GT-3b-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BSN5	2.57e-147	80.71	trihelix transcription factor GT-3b-like OS=Cucumis melo OX=3656 GN=LOC103493063...	[more]

BLAST of Cp4.1LG01g01360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38250.1	1.4e-36	40.29	Homeodomain-like superfamily protein	[more]
AT5G01380.1	2.1e-32	35.51	Homeodomain-like superfamily protein	[more]
AT5G47660.1	6.9e-07	37.68	Homeodomain-like superfamily protein	[more]
AT3G25990.1	2.0e-06	28.71	Homeodomain-like superfamily protein	[more]
AT1G76890.2	4.5e-06	28.67	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 13..103 e-value: 1.1E-15 score: 57.8
None	No IPR available	GENE3D	1.10.10.60		coord: 15..83 e-value: 4.4E-15 score: 57.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..181
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 13..277
None	No IPR available	PANTHER	PTHR21654:SF80	SUBFAMILY NOT NAMED	coord: 13..277
None	No IPR available	CDD	cd12203	GT1	coord: 14..85 e-value: 4.95292E-16 score: 68.8459
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 7..78 score: 6.852724

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01360.1	Cp4.1LG01g01360.1	mRNA