Cp4.1LG01g01130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g01130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNDR1/HIN1-like protein 12
LocationCp4.1LG01: 3098947 .. 3099549 (-)
RNA-Seq ExpressionCp4.1LG01g01130
SyntenyCp4.1LG01g01130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGATGATCCGTGTCATCGGCGCTCATCTCAATAACTTCCAGAACGACATCGCCGGACGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCACGCGAGTTTCTCCGATACGAGATTGTTCAAGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTAAGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGTGTTGAAGACGGATCTGATCCAGTTCAATTTGAACGGGGACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTCAATTTCATCATTCCAACGGAACGTACTTGATTTCACCTTGTAGTTCTCGAGCAAAATGA

mRNA sequence

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGATGATCCGTGTCATCGGCGCTCATCTCAATAACTTCCAGAACGACATCGCCGGACGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCACGCGAGTTTCTCCGATACGAGATTGTTCAAGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTAAGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGTGTTGAAGACGGATCTGATCCAGTTCAATTTGAACGGGGACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTCAATTTCATCATTCCAACGGAACGTACTTGATTTCACCTTGTAGTTCTCGAGCAAAATGA

Coding sequence (CDS)

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGATGATCCGTGTCATCGGCGCTCATCTCAATAACTTCCAGAACGACATCGCCGGACGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCACGCGAGTTTCTCCGATACGAGATTGTTCAAGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTAAGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGTGTTGAAGACGGATCTGATCCAGTTCAATTTGAACGGGGACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTCAATTTCATCATTCCAACGGAACGTACTTGATTTCACCTTGTAGTTCTCGAGCAAAATGA

Protein sequence

MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCGLQFHHSNGTYLISPCSSRAK
Homology
BLAST of Cp4.1LG01g01130 vs. NCBI nr
Match: XP_023526921.1 (uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400 bits (1028), Expect = 1.29e-140
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS
Sbjct: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           LQFHHSNGTYLISPCSSRAK
Sbjct: 181 LQFHHSNGTYLISPCSSRAK 200

BLAST of Cp4.1LG01g01130 vs. NCBI nr
Match: KAG7031080.1 (hypothetical protein SDJN02_05119, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372 bits (955), Expect = 1.75e-129
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VI AHL+
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQNDIAGRLEV LTILVEA NDNAKAHASFSDT LF SFLGLNIAELVADPFDVRKNSS
Sbjct: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FHHSNGTYLISPCSSRAK
Sbjct: 181 LKFHHSNGTYLISPCSSRAK 200

BLAST of Cp4.1LG01g01130 vs. NCBI nr
Match: KAG6600429.1 (hypothetical protein SDJN03_05662, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371 bits (953), Expect = 3.52e-129
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VI AHL+
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQNDIAGRLEV LTILVEAENDNAKAHASFSDT LF SFLGLNIAELVADPFDVRKNSS
Sbjct: 61  NFQNDIAGRLEVHLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           VQF YAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFDYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FHHSNGTYLISPCSSRAK
Sbjct: 181 LKFHHSNGTYLISPCSSRAK 200

BLAST of Cp4.1LG01g01130 vs. NCBI nr
Match: XP_022942740.1 (uncharacterized protein LOC111447688 [Cucurbita moschata])

HSP 1 Score: 343 bits (880), Expect = 3.32e-118
Identity = 172/184 (93.48%), Postives = 177/184 (96.20%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VIGAHL+
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQN+IAGRLEVQLTILVEAENDNAKAHASFSDT LF SFLGLNIAELVADPFDVRKN S
Sbjct: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LQFH 184
           L+FH
Sbjct: 181 LKFH 184

BLAST of Cp4.1LG01g01130 vs. NCBI nr
Match: XP_022136394.1 (uncharacterized protein LOC111008115 [Momordica charantia])

HSP 1 Score: 306 bits (783), Expect = 2.83e-103
Identity = 149/200 (74.50%), Postives = 172/200 (86.00%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIP I VIGAHL+
Sbjct: 1   MPPRLISDAKRRTHPLVWFAAVLCTILSIAVIIGGIVVFVGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
            FQ D+AGRLEVQLTI+VEAENDNAKAHASFSDT  F SFLG+ IA LVADPF VRKNSS
Sbjct: 61  GFQIDVAGRLEVQLTIVVEAENDNAKAHASFSDTSFFLSFLGIRIARLVADPFAVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
            +F YA+ S  IPLNPEQMEE D+ LK+DL +F+L G+TRVQWRVG+ GSVK+ C +HC 
Sbjct: 121 HKFQYAIASSSIPLNPEQMEEADYALKSDLSRFDLKGNTRVQWRVGMLGSVKYWCHLHCE 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FH SNGTYL  PCSS+AK
Sbjct: 181 LKFHPSNGTYLSLPCSSKAK 200

BLAST of Cp4.1LG01g01130 vs. ExPASy TrEMBL
Match: A0A6J1FWU7 (uncharacterized protein LOC111447688 OS=Cucurbita moschata OX=3662 GN=LOC111447688 PE=4 SV=1)

HSP 1 Score: 343 bits (880), Expect = 1.61e-118
Identity = 172/184 (93.48%), Postives = 177/184 (96.20%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VIGAHL+
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQN+IAGRLEVQLTILVEAENDNAKAHASFSDT LF SFLGLNIAELVADPFDVRKN S
Sbjct: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LQFH 184
           L+FH
Sbjct: 181 LKFH 184

BLAST of Cp4.1LG01g01130 vs. ExPASy TrEMBL
Match: A0A6J1C468 (uncharacterized protein LOC111008115 OS=Momordica charantia OX=3673 GN=LOC111008115 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 1.37e-103
Identity = 149/200 (74.50%), Postives = 172/200 (86.00%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIP I VIGAHL+
Sbjct: 1   MPPRLISDAKRRTHPLVWFAAVLCTILSIAVIIGGIVVFVGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
            FQ D+AGRLEVQLTI+VEAENDNAKAHASFSDT  F SFLG+ IA LVADPF VRKNSS
Sbjct: 61  GFQIDVAGRLEVQLTIVVEAENDNAKAHASFSDTSFFLSFLGIRIARLVADPFAVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
            +F YA+ S  IPLNPEQMEE D+ LK+DL +F+L G+TRVQWRVG+ GSVK+ C +HC 
Sbjct: 121 HKFQYAIASSSIPLNPEQMEEADYALKSDLSRFDLKGNTRVQWRVGMLGSVKYWCHLHCE 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FH SNGTYL  PCSS+AK
Sbjct: 181 LKFHPSNGTYLSLPCSSKAK 200

BLAST of Cp4.1LG01g01130 vs. ExPASy TrEMBL
Match: A0A6J1JD00 (uncharacterized protein LOC111483375 OS=Cucurbita maxima OX=3661 GN=LOC111483375 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.86e-101
Identity = 146/200 (73.00%), Postives = 169/200 (84.50%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ +FIGYLVIHPR+PMI +I AHL+
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGIIDAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQNDIAGRLEVQLT++V+AENDNAKAHASFSDT  F  FLG+ IA+LVA  FDVRKN S
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNGS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           +  HY V S  IPL PEQMEEVD+ LK+D+ +F+L GDTRVQWRVGL GSVK+ C +HC 
Sbjct: 121 LMLHYEVASNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FH SNGTY   PCSSRAK
Sbjct: 181 LKFHPSNGTYFSPPCSSRAK 200

BLAST of Cp4.1LG01g01130 vs. ExPASy TrEMBL
Match: A0A0A0KX91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.86e-101
Identity = 148/200 (74.00%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIP I ++ AHL+
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEVQLTI++EA+NDNAKAHASFSD+  F  FLG+ IA+LVADPF+VRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           ++F YAV S  IPLNPEQME VD  LK DL +F+L G+TRVQWRVGL GSVK+ C +HCG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

BLAST of Cp4.1LG01g01130 vs. ExPASy TrEMBL
Match: A0A5D3D1V8 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002470 PE=4 SV=1)

HSP 1 Score: 299 bits (766), Expect = 5.32e-101
Identity = 148/200 (74.00%), Postives = 170/200 (85.00%), Query Frame = 0

Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60
           MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIP I ++ AHL+
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEVQLTI+VEA+NDNAKAHASFSD+  F  FL + IA+LVADPF+V+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180
           ++FHYAV S  IPLNPEQME VD+ LK DL  F L G+TRVQWRVGL GSVK+ C +HC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LQFHHSNGTYLISPCSSRAK 200
           L+FH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

BLAST of Cp4.1LG01g01130 vs. TAIR 10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 194.5 bits (493), Expect = 8.1e-50
Identity = 98/198 (49.49%), Postives = 130/198 (65.66%), Query Frame = 0

Query: 3   PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNF 62
           P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P+I V  AHL+  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQ 122
           + DI G L+ QLTI++  ENDNAKAHA F +T    S+ G  IA L A  F+V K  S+ 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 FHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCGLQ 182
             Y V S  IPLNP  M+ VD+ +K D+I F L G +R +WRVG  GSVKF C + C L+
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLR 181

Query: 183 FHHSNGTYLISPCSSRAK 201
           F  S+ +Y+ SPC+S  K
Sbjct: 182 FRPSDHSYIPSPCTSAHK 197

BLAST of Cp4.1LG01g01130 vs. TAIR 10
Match: AT3G26350.1 (LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13
Identity = 46/174 (26.44%), Postives = 77/174 (44.25%), Query Frame = 0

Query: 11  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNFQNDIAGRL 70
           R T+ + W AA  C +  + +I+ G+ + I YLV  PR P + +  A+LN    D+   L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQFHYAVNSI 130
              LTIL    N + K+   FS       +    IA    +PF V K +S+  +  + S 
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 131 KIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCGLQFH 185
           ++ L   Q  E+   ++T  +  NL G    +  +G      +    HC +  +
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLN 340

BLAST of Cp4.1LG01g01130 vs. TAIR 10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 47/173 (27.17%), Postives = 75/173 (43.35%), Query Frame = 0

Query: 12  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNFQNDIAGRLE 71
           RT   IW  A  C + S+ +I   +   I +L I PRIP+  +  A+L+    D      
Sbjct: 81  RTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIRPRIPVFDIPNANLHTIYFDTPEFFN 140

Query: 72  VQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQFHYAVNSIK 131
             L++LV   N N K    F   R+   F    IA  V  PF  +K+ +      + S  
Sbjct: 141 GDLSMLVNFTNPNKKIEVKFEKLRIELFFFNRLIAAQVVQPFLQKKHETRLEPIRLISSL 200

Query: 132 IPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIH--CGLQ 183
           + L      E+   L+ + I++ + G  +V+     FG + +  Q+H  C LQ
Sbjct: 201 VGLPVNHAVELRRQLENNKIEYEIRGTFKVK---AHFGMIHYSYQLHGRCQLQ 250

BLAST of Cp4.1LG01g01130 vs. TAIR 10
Match: AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 41/174 (23.56%), Postives = 74/174 (42.53%), Query Frame = 0

Query: 11  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNFQNDIAGRL 70
           +RT P+   A + C ++ I +I++G+ + + YL   PR P   +  A LN    D+   L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQFHYAVNSI 130
              L ++V   N + K+   FS       F    IA    +PF V K  S+   + + S 
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSS 247

Query: 131 KIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCGLQFH 185
           ++ +   Q +++   L T  +  NL G    +  +G      +     C +  +
Sbjct: 248 QVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLN 301

BLAST of Cp4.1LG01g01130 vs. TAIR 10
Match: AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-07
Identity = 38/165 (23.03%), Postives = 69/165 (41.82%), Query Frame = 0

Query: 20  AAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLNNFQNDIAGRLEVQLTILVE 79
           A + C ++ I +I++G+ + + YL   PR P   +  A LN    D+   L   L ++V 
Sbjct: 5   ATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVN 64

Query: 80  AENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSSVQFHYAVNSIKIPLNPEQM 139
             N + K+   FS       F    IA    +PF V K  S+   + + S ++ +   Q 
Sbjct: 65  FTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQS 124

Query: 140 EEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCGLQFH 185
           +++   L T  +  NL G    +  +G      +     C +  +
Sbjct: 125 QDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLN 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023526921.11.29e-140100.00uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo][more]
KAG7031080.11.75e-12993.50hypothetical protein SDJN02_05119, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600429.13.52e-12993.50hypothetical protein SDJN03_05662, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022942740.13.32e-11893.48uncharacterized protein LOC111447688 [Cucurbita moschata][more]
XP_022136394.12.83e-10374.50uncharacterized protein LOC111008115 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1FWU71.61e-11893.48uncharacterized protein LOC111447688 OS=Cucurbita moschata OX=3662 GN=LOC1114476... [more]
A0A6J1C4681.37e-10374.50uncharacterized protein LOC111008115 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1JD001.86e-10173.00uncharacterized protein LOC111483375 OS=Cucurbita maxima OX=3661 GN=LOC111483375... [more]
A0A0A0KX911.86e-10174.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1[more]
A0A5D3D1V85.32e-10174.00NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
Match NameE-valueIdentityDescription
AT5G45320.18.1e-5049.49FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G26350.12.7e-1326.44LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED ... [more]
AT4G26490.11.4e-0927.17Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G13050.13.1e-0923.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G13050.21.3e-0723.03unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 7..200
NoneNo IPR availablePANTHERPTHR31852:SF9LATE EMBRYOGENESIS ABUNDANT PROTEINcoord: 7..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g01130.1Cp4.1LG01g01130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane