Cp4.1LG00g02080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g02080
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ethylene-responsive transcription factor 3-like
Location	Cp4.1LG00: 5630336 .. 5636027 (-)
RNA-Seq Expression	Cp4.1LG00g02080
Synteny	Cp4.1LG00g02080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTAATGTTATGCTATGAATGAAATTCATGTGAAGCTCATGCATGTATGTATGTCAAGTGCATCGGGATACTTTTCCATTATGTTATGTTAGTATGGACATGTACTTTCGATATTCATGTTCGTCATGATATCATGTGGGCCTTTCCTTTTCTGTGGTGTCTGACAACCTGTTAATGTGTTGTGCCCAACCAAGTAAGGCCTAGTGGGTATGTATACGAGTCCGCTTGGTGGGTCCATGTGCGTGGGCCATGTGTGGGGAAGTACCGCACATTCAACCTTACCCGAAAATGGAAAGAGTCCAAGGCCATGTTACGGTTTTAAAGGATAGGTCTCATCATTACATGTGTGTCTTGTATTACTAACCCCAACAATGGGGTGATTTACTGAATATTTCTTAAACTACTTAAGCCACGTGCTACCCTTATGTTTTTCAGGTAAAGGTAAGTGTTCCTACACGAATGAAGGTGAATGTTGGAATGACCATGGAAGTCAAGATCGGGCAATTACGTACATTAAATTTCATTTAGTAGTTGATAGGTGATTTATTTCATTTTTTTTCGTGTTAAAAAACTATGTTATTTTTATTTTTGTTTTAAAATAAATGTATAAGTCCATGGCACATGTATATAGCGATGTCTCTAGTTTAGGCCAAAAAATTAGTAGTGTTATAGATTATTTTTTAAAATTCAATTGAAGCCTAGGGCCAACGTCTTCTCTCCAAACCAGTCCCAGTCAATTGCTAGGCACTCAAGAAATTTATTCATGAAGATCGGGATAATTCAAAATTTGGTTCTACATGCAAGCTCATTGGATAACTGATATGAACCAAGAGACATCAATCATAAAATGTGCTTCAATGAAGATGTGAAGGAAATATTGTTGAAATTATCAAAAAATATTTCAATTCATGCCACATTGAAGAAGAATGAAGTTTCATGTGATAAATTGTGGGTTGATTACAATTTAGAGTTATTGTATTTCATTAATGTAGTTTAAGAGTTTTTATTTATTTTATGTTACAATTACATAATGCGTAATTATGGCCATTAAGTATGAATGTTACAACTCTTGGAATGCCTCTAATAGTTTGATTTTGAGGCTATATAAAGCCATATATGTTGTATTTGTAATTAGACTGGGAAAATATAGTAAAAAGAGTATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTACTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTACTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTATCTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATCTTGCTTCTTGAGTGATTCGAATCTCAAACAAAGTGTTCTTGGCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGATTCCTTATCATATCATAACCTTCCACTCTTTGTGAAGAACTTGCAATTGTGCACGTTTGAAGAGCTTTCCTTAAAATGGTGTCTAGAGTTGGACGATCTATAGCTTGGAAGAGATAGTTTTTGGTTTTTAAATCCTTCAACTTAAGATCTTCGATTGCTTTTTTTTTTATCCCTGTGAAAGAATTTCTCCTTCTCTTGCACAAATTCCTTGCTCCACCAGAGTCCAATATTCTTTTGATTGGAGAAGGTTTTCTATCATAATGTCCATCTAACTTTGGAATAGATGGTTGCACAAAACTACTTTTTGTTTTCATATCTCACTCCTCTTATCCTAGAATGGCTGCTACTTTTCGTAAGCAGGTCTCCATATCACTCATCTTATCCTGAAAAGACGGTTCTTTGGTGAGTTGAGGTTGTCTCTATAGTTCTACCAAATAACTTCTAAAATATGTAGAAAAATAGGTACGAAGTTGAGGGAAAATATCATGAAATTAGGAGCATCCACACTTTTTCCAAGTCATTTCTTAAACTTGATGGAAAAATAAGAAAGAAATTAAATGAAGGGAGGCTTGATATGGTCTAAAATGCCCCAACCAGTAGGAGTCTCACGTTTTTATTTTGACAAAAAAATCATATTTTTTTAGTGAACTTTCGAGGTCGGTAACTTGAGCTATAATTCACTCAAAGGTATAAAATTGATTCCTAGCTCTTTCTTGCAACATGATCTTTAAGTTGGATGAAGAAATCAAACGTCAAAAGTTGTTGTTGTATCATGTTGTAGAGGTCGAGATTCAAAGTAGGTTGAACACGAGTTGTGCATCTTCCTCACCTGTTTTGGAGAAGAAGATGAAGTGGTCATGCAAGGCAAAACCATGAACTTTCCTTGGTTTATCTCAAATTAATATCATTTCAAACCCGTTCTCAAGAAATTCTTGTTCTTCTAGAAATTGTTCTTCTAGAAACTATACTAAAAATGGATCTACCAAAAAAAATTTGGAACGATTCCGATATTGGAAGTTCGAGAATTGAAAGCCTGAATGCCAACGATGAGATGAGTAGAAAATCTAGACTTTTCTTAAGAAAAATTTGTAGGAATTGCTTAGATTCCAATATATACCTTATGTTAAGTGAAATTTAAACGATTATATATAAGAATCAAACAAAGAAGCATGAATTAAGGTCCTTCAAACTCAGGAAATCAAGGAATCCCTAGACCTCCTACAGTACAACATGTTCATGACTCAAACTACATCGCTTGAAATGTAAGAGGCTTTGAATGTAAGTTTTAAGACTGTATGGTTTGGAACATAAGAAGACTTGGATGTAGGTTTCACACTATGCTTCTTGCAACGTATGAAGTATTGGGTGTAGGTTTCGGACTACGTTGCTTGCAACGATGAAGTTTTGGGTATAGGTTTTAGACTATGCCGCTTTGAATGTATGAAGCCTTAGACATAGGTTTTTAGACTACATCGCTTGGAACGTATGAAACCTTAGATGTAGGTTTTAGACTAAACTATTTTGAACGTAAGAAGCTTTTTGTGTAGGTTTCAGACTCTATCGCAGGGAACACATGATGCACTGGATGCAAGTTCAGACTACGTCGCTTGGAACGCGTGAAGCCTTGAACATAGGTTTAGATTGTGTTGCTTGGAATGTATGAAGCCTTAGACATAGGTTGTCGAATTCATATCTTGTACTGTAAATCCTAGGGGAGTGTCTTAAGGAATAAGACAAGAAACAAGAAGAATGACAACAACCATGAGAAGAACGAAAAACAAGAACTAAGATCAAGAATCAAGAATCAAGGATAAGAACTAGAACTTGGATTTAGGACTAAGAACCAAAAACCTCCTAACTAAGAACCTAGATCATAACCAAGACTATAAACTTAGAACTCAAGACCAAATTCTTTGGGCAAGATCATGAAAAAAAGAACTTAGAACTCAAGAACAAAACCTAAAGATCTAAGTTCTCACATCAAGAACAAGAATATGACAAGAAAGAGTGTGATACTTTAGCATACCTTACTAATACGATTAGGAAACTACAAGTAGGCTACTTACTGAATCTTTATACTCATTCAAGTTCTCTCGTGTTCTTCAAATAGAAAGAACGGGGATGGACGCAAATCTAAAGTAGGTTCCATTACAGAGTCACACTATATTTCAACTATTCAAATGTTGTTAATTTTTTTCTTTTCAATGTATTTAAACACTATTTTATATTTGTAAATAAAATGGGTTTATGTCTTTGTTTTTATTTAAAAAGAAAAATTACCTTTTCATTATTCGTGTCTAAGATATTAAACACTAATTTAGACACTTCAAATTAAATATATTTTTTGTTATTTTTATTTAATATATATAATATATTAAATATTAATCTAAATATTTCAAATTAAATATATTTTTCTTTTATATTTAATGTAGATAATATATTAAATATTATTTTATTGTTACGGTACGGAAATCATATGGATCTACTGATTATGTACTGATTATGATGATATAAAATTAGTTAATTAAACTCTTTAATAAATTGATTTTAAATAACTAAATATAGATTATTTCATANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACGGTAGGACAAGTTGTATCCATAGATATAATCATTATAAGTAAGTTGATCTTTCACAAATTATTCATAATTATACATGGGTTAAAAGTGCATTTTACTCCTTAAGTATCACTAATTGAATAATAAATAATTTATTTATGATCAAATCATAACTAAATCCCCGAGCAAATAAGAGGGTGGGGCCCATTATTTAAGTCTCGAAATCAAAACTTGAAGGAAGTACTTATAAACTTATTTTATGTGGGATGGAATGAATTCTATCTCGTGAAACTATGTTTTCAGCTTTCTATTTGGTTAAATCACCAAAATGGTAGGTATATTGAATCGACTACTAAAAGTCCTTCTCACTCNAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAACAAGTCTTCATAGGCATGAATTTATAACTCATTCAAGATTAAAATTAAATCGCATACGATCATATTGTGAAATATTAATTTCTCAATCAATGAATTCCGTGGTCCACTCATTTGGTCTTCATCATTTGTATCGGTTACAAAATTAGTTGTGTCAGATGTGTTATTAAGATAAGTCACCCAACATTATCCATATATTAGAGACTCTATACGTTATTACGTAAACATATTATTTTTTACGTAAATCACGTATTGTTTAAGATGACACTGATAATCTTAAATTTCTTTTATTATATACTAAATAATATTAAATTAGAAATAAAATAATAAAATTTATTTATTTTTTGAAAGATACAAAGGTAAGGGCAAGGAAATGAGAGTGGCGAACATGTGCGAGGAGGGTATATTAGTAATTTGATTTCAAACGCGGAGTGTGAATACGTAATATAAAATTGAGAATTTAAAATATGAAAAAATATTTTAATTTTGGTGAAGAAGCTGAGAAGGTGGAGATGGTGGCTTCCAGTTTTTTGTCCTCACGGACGCGACCCCTTTATCTCTCTCTCTCATCATTTCGGCTCTGTCATTTCTGAAATCCCAGAGCACAACAAATAGTCTCTCCAATTTTTCCTTTTCGATTACATCTTCAGCCCTTCATCTTCGTCGTGGTGATGAGGAGAGGGAGAGCGGCGGCGGACACGGCGGTGCGTGTGGTACCAATAACCGGGTCGGAACGGAGATACAGAGGAGTTCGCCGAAGGCCATGGGGGAGATTCGCGGCGGAGATTAGAGACCCATTGAAGAAGACCAGAGTTTGGTTGGGCACCTTCGATTCCGCTGAGGATGCCGCCCGTGCTTACGACAACGCCGCCATATCCCTCCGCGGCCCCAAAGCTAAAATCAATTTCCCCCTTCCCACTCCCACCTCCTTTTTCGACTACCCTCCTCCTTGCCCTGATCGCCGATTCCTTACTAACCCTCACAGACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGTCGATACCCACGCACGCCGCCCGTCGTCCCTGAGGATTGTCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGATGACGGCGACATCGCTTCCTCGTCCATGATTCGTCGGAAATCTCCCCTGCCGTTCGATCTTAACATTCAACCGTCTGATCATCTAGATTTTTGGTGGCGATGA

mRNA sequence

ATGATACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGTCGATACCCACGCACGCCGCCCGTCGTCCCTGAGGATTGTCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGATGACGGCGACATCGCTTCCTCGTCCATGATTCGTCGGAAATCTCCCCTGCCGTTCGATCTTAACATTCAACCGTCTGATCATCTAGATTTTTGGTGGCGATGA

Coding sequence (CDS)

ATGATACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGTCGATACCCACGCACGCCGCCCGTCGTCCCTGAGGATTGTCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGATGACGGCGACATCGCTTCCTCGTCCATGATTCGTCGGAAATCTCCCCTGCCGTTCGATCTTAACATTCAACCGTCTGATCATCTAGATTTTTGGTGGCGATGA

Protein sequence

MIPTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIASSSMIRRKSPLPFDLNIQPSDHLDFWWR

Homology

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy Swiss-Prot
Match: Q9LDE4 (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.1e-23
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATS-------ASRRYPRTPPVVPEDCHSDCDSSSSVI 62
           P SS++SSTV+S SGPRP  AAAA+S       A +RYPRTPPV PEDCHSDCDSSSSVI
Sbjct: 139 PASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSSSVI 198

Query: 63  DDGDIASSSMIRRKSPLPFDLNIQPSDHLDFW 88
           DDGD  +SS  RRK+P  FDLN  P D +D +
Sbjct: 199 DDGDDIASSSSRRKTPFQFDLNFPPLDGVDLF 230

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-22
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSS++SSTVESFSGPRP +   AT  ++RYPRTPPVVPEDCHSDCDSSSSVIDD D  +
Sbjct: 130 PTSSSMSSTVESFSGPRPTTMKPAT--TKRYPRTPPVVPEDCHSDCDSSSSVIDDDDDIA 189

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDFW 88
           SS  RR  P  FDLN  P D +D +
Sbjct: 190 SSSRRRNPPFQFDLNFPPLDCVDLF 212

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-18
Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSA--AAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGD- 62
           PTSS++SSTVESFSGPRPP A     T++SR+Y R+PPVVP+DCHSDCDSSSSV+D GD 
Sbjct: 121 PTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDC 180

Query: 63  ----------IASSSMIRRKSPLPFDLNIQP 81
                     IASSS    + PL FDLN+ P
Sbjct: 181 EKENDNDNDNIASSSF---RKPLLFDLNLPP 208

[Close]

BLAST of Cp4.1LG00g02080 vs. NCBI nr
Match: XP_023520762.1 (ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171 bits (434), Expect = 3.21e-52
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 106 PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 165

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDFWWR 89
           SSMIRRKSPLPFDLNIQPSDHLDFWWR
Sbjct: 166 SSMIRRKSPLPFDLNIQPSDHLDFWWR 192

[Close]

BLAST of Cp4.1LG00g02080 vs. NCBI nr
Match: XP_023005565.1 (ethylene-responsive transcription factor 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 1.33e-50
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PT STLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 102 PTPSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 161

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDFWWR 89
           SSMIRRK PLPFDLNIQPSDHLDFWWR
Sbjct: 162 SSMIRRKYPLPFDLNIQPSDHLDFWWR 188

[Close]

BLAST of Cp4.1LG00g02080 vs. NCBI nr
Match: XP_022948893.1 (LOW QUALITY PROTEIN: ethylene-responsive transcription factor 3-like [Cucurbita moschata])

HSP 1 Score: 160 bits (406), Expect = 7.33e-48
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 105 PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 164

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDF 86
           SSMIRRKSPLPFDLNIQPSDHLDF
Sbjct: 165 SSMIRRKSPLPFDLNIQPSDHLDF 188

[Close]

BLAST of Cp4.1LG00g02080 vs. NCBI nr
Match: KAG6596944.1 (Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028423.1 Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157 bits (398), Expect = 1.10e-46
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSSTLSSTVESFSGPR PSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 102 PTSSTLSSTVESFSGPRTPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 161

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDF 86
           SSMIRRKSPLPFDLNIQPSDHLDF
Sbjct: 162 SSMIRRKSPLPFDLNIQPSDHLDF 185

[Close]

BLAST of Cp4.1LG00g02080 vs. NCBI nr
Match: XP_023005563.1 (ethylene-responsive transcription factor 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 156 bits (395), Expect = 3.13e-46
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PT STLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 102 PTPSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 161

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDF 86
           SSMIRRK PLPFDLNIQPSDHLDF
Sbjct: 162 SSMIRRKYPLPFDLNIQPSDHLDF 185

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL
Match: A0A6J1KXR5 (ethylene-responsive transcription factor 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498510 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 6.45e-51
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PT STLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 102 PTPSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 161

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDFWWR 89
           SSMIRRK PLPFDLNIQPSDHLDFWWR
Sbjct: 162 SSMIRRKYPLPFDLNIQPSDHLDFWWR 188

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL
Match: A0A6J1GAK1 (LOW QUALITY PROTEIN: ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111452414 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 3.55e-48
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 105 PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 164

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDF 86
           SSMIRRKSPLPFDLNIQPSDHLDF
Sbjct: 165 SSMIRRKSPLPFDLNIQPSDHLDF 188

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL
Match: A0A6J1L2I9 (ethylene-responsive transcription factor 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498510 PE=4 SV=1)

HSP 1 Score: 156 bits (395), Expect = 1.52e-46
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PT STLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS
Sbjct: 102 PTPSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 161

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDF 86
           SSMIRRK PLPFDLNIQPSDHLDF
Sbjct: 162 SSMIRRKYPLPFDLNIQPSDHLDF 185

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL
Match: A0A6J1EVY5 (ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111438638 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 9.52e-35
Identity = 72/85 (84.71%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAAT-SASRRYPRTPPVVPEDCHSDCDSSSSVIDDGD-I 62
           PTSS+LSSTVESFSGP PPSAAA T S SRRYPRTPP++PEDCHSDCDSSSSVIDDGD I
Sbjct: 124 PTSSSLSSTVESFSGPHPPSAAATTASPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDI 183

Query: 63  ASSSMIRRKSPLPFDLNIQPSDHLD 85
           ASSSMI RK PLPFDLNI PS+ LD
Sbjct: 184 ASSSMIPRKPPLPFDLNIPPSELLD 208

[Close]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL
Match: A0A6J1HJM8 (ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111465111 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 1.35e-34
Identity = 71/85 (83.53%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAAT-SASRRYPRTPPVVPEDCHSDCDSSSSVIDDGD-I 62
           PTSS+LSSTVESFSGP PPSAAA T S SRRYPRTPP++PEDCHSDCDSSSSVIDDGD I
Sbjct: 124 PTSSSLSSTVESFSGPHPPSAAATTASPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDI 183

Query: 63  ASSSMIRRKSPLPFDLNIQPSDHLD 85
           ASSSM+ RK PLPFDLNI PS+ LD
Sbjct: 184 ASSSMVPRKPPLPFDLNIPPSELLD 208

[Close]

BLAST of Cp4.1LG00g02080 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 107.5 bits (267), Expect = 5.8e-24
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATS-------ASRRYPRTPPVVPEDCHSDCDSSSSVI 62
           P SS++SSTV+S SGPRP  AAAA+S       A +RYPRTPPV PEDCHSDCDSSSSVI
Sbjct: 139 PASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSSSVI 198

Query: 63  DDGDIASSSMIRRKSPLPFDLNIQPSDHLDFW 88
           DDGD  +SS  RRK+P  FDLN  P D +D +
Sbjct: 199 DDGDDIASSSSRRKTPFQFDLNFPPLDGVDLF 230

[Close]

BLAST of Cp4.1LG00g02080 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-23
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3   PTSSTLSSTVESFSGPRPPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIAS 62
           PTSS++SSTVESFSGPRP +   AT  ++RYPRTPPVVPEDCHSDCDSSSSVIDD D  +
Sbjct: 130 PTSSSMSSTVESFSGPRPTTMKPAT--TKRYPRTPPVVPEDCHSDCDSSSSVIDDDDDIA 189

Query: 63  SSMIRRKSPLPFDLNIQPSDHLDFW 88
           SS  RR  P  FDLN  P D +D +
Sbjct: 190 SSSRRRNPPFQFDLNFPPLDCVDLF 212

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDE4	8.1e-23	64.13	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
O80339	1.8e-22	67.06	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9SXS8	2.7e-18	60.44	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]

BLAST of Cp4.1LG00g02080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520762.1	3.21e-52	100.00	ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005565.1	1.33e-50	97.70	ethylene-responsive transcription factor 3-like isoform X2 [Cucurbita maxima]	[more]
XP_022948893.1	7.33e-48	100.00	LOW QUALITY PROTEIN: ethylene-responsive transcription factor 3-like [Cucurbita ...	[more]
KAG6596944.1	1.10e-46	98.81	Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subs...	[more]
XP_023005563.1	3.13e-46	97.62	ethylene-responsive transcription factor 3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG00g02080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXR5	6.45e-51	97.70	ethylene-responsive transcription factor 3-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1GAK1	3.55e-48	100.00	LOW QUALITY PROTEIN: ethylene-responsive transcription factor 3-like OS=Cucurbit...	[more]
A0A6J1L2I9	1.52e-46	97.62	ethylene-responsive transcription factor 3-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1EVY5	9.52e-35	84.71	ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HJM8	1.35e-34	83.53	ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cp4.1LG00g02080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20310.1	5.8e-24	64.13	ethylene response factor 7	[more]
AT1G50640.1	1.3e-23	67.06	ethylene responsive element binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	PANTHER	PTHR31677:SF134	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7	coord: 3..72
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 3..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02080.1	Cp4.1LG00g02080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity