Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGCGACGGCGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA
mRNA sequence
ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGCGACGGCGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA
Coding sequence (CDS)
ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGCGACGGCGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA
Protein sequence
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR
Homology
BLAST of CmoCh20G011740 vs. ExPASy TrEMBL
Match:
A0A6J1EIT8 (uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC111434949 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN
Sbjct: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
Query: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE
Sbjct: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
Query: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 167
TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR
Sbjct: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 166
BLAST of CmoCh20G011740 vs. ExPASy TrEMBL
Match:
A0A6J1I9D9 (uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397 PE=4 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0
Query: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN
Sbjct: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
Query: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
PSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE
Sbjct: 61 PSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
Query: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 165
BLAST of CmoCh20G011740 vs. ExPASy TrEMBL
Match:
A0A0A0LJU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 151/166 (90.96%), Postives = 157/166 (94.58%), Query Frame = 0
Query: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
MAST ISP LQIL+PRCRL+ TVRAA+VK P ESLSA+RTRRQTLL LTATATAAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTATATAAVVGRE 60
Query: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGII AER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 166
BLAST of CmoCh20G011740 vs. ExPASy TrEMBL
Match:
A0A5D3CRC5 (Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002670 PE=4 SV=1)
HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
Query: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
MAST ISP LQIL+PRCRL+ TVRAA+VKPP ESLSA+RTRRQTLL L TATAAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFL--TATAAVVGRE 60
Query: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGII AER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
ETAEKEIE+AV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 ETAEKEIETAVSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 164
BLAST of CmoCh20G011740 vs. ExPASy TrEMBL
Match:
A0A1S3C6G5 (uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=4 SV=1)
HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
Query: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
MAST ISP LQIL+PRCRL+ TVRAA+VKPP ESLSA+RTRRQTLL L TATAAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFL--TATAAVVGRE 60
Query: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGII AER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
ETAEKEIE+AV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 ETAEKEIETAVSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 164
BLAST of CmoCh20G011740 vs. NCBI nr
Match:
XP_022928047.1 (uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 uncharacterized protein LOC111776892 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN
Sbjct: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
Query: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE
Sbjct: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
Query: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 167
TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR
Sbjct: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 166
BLAST of CmoCh20G011740 vs. NCBI nr
Match:
XP_022971729.1 (uncharacterized protein LOC111470397 [Cucurbita maxima])
HSP 1 Score: 292.4 bits (747), Expect = 2.5e-75
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0
Query: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN
Sbjct: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
Query: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
PSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE
Sbjct: 61 PSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
Query: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 165
BLAST of CmoCh20G011740 vs. NCBI nr
Match:
KAG6571416.1 (hypothetical protein SDJN03_30331, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011180.1 hypothetical protein SDJN02_27978, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 288.5 bits (737), Expect = 3.7e-74
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0
Query: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGREN 60
MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLIL TAT AVVGREN
Sbjct: 1 MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLIL--TATGAVVGREN 60
Query: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE
Sbjct: 61 PSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIE 120
Query: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 167
TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR
Sbjct: 121 TAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 164
BLAST of CmoCh20G011740 vs. NCBI nr
Match:
XP_004148045.1 (uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical protein Csa_006379 [Cucumis sativus])
HSP 1 Score: 265.0 bits (676), Expect = 4.3e-67
Identity = 151/166 (90.96%), Postives = 157/166 (94.58%), Query Frame = 0
Query: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
MAST ISP LQIL+PRCRL+ TVRAA+VK P ESLSA+RTRRQTLL LTATATAAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTATATAAVVGRE 60
Query: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGII AER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 166
BLAST of CmoCh20G011740 vs. NCBI nr
Match:
XP_038900735.1 (uncharacterized protein LOC120087852 [Benincasa hispida])
HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65
Identity = 150/167 (89.82%), Postives = 156/167 (93.41%), Query Frame = 0
Query: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTAT-ATAAVVGR 60
MAST ISP+LQIL RCRLNITVRAA+VK PESLSA RTRRQTLL LTAT A AAVVGR
Sbjct: 1 MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
Query: 61 ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERG 120
ENPS+AEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+ AERG
Sbjct: 61 ENPSVAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERG 120
Query: 121 IETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 166
IETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 IETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 167
BLAST of CmoCh20G011740 vs. TAIR 10
Match:
AT2G23670.1 (homolog of Synechocystis YCF37 )
HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35
Identity = 99/174 (56.90%), Postives = 118/174 (67.82%), Query Frame = 0
Query: 1 MASTISPIL-----QILQPRC--RLNITVRAA-SVKPPPESLSAARTRRQTLLILTATAT 60
MAST+S L LQ RC +++ RAA S KP S S R+ LL + TA
Sbjct: 1 MASTVSLSLLSGGSGALQARCARTAHVSPRAAHSNKPALSSFSLTGASRRNLL-FSLTAA 60
Query: 61 AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGI 120
V G + SMAE+IPLFG+RKKLKK EEEA EIV+EGFE AEKG++ AEKG+
Sbjct: 61 TVVTGLQPASMAENIPLFGIRKKLKKAEEEAVEIVKEGFETAEKGVD-------AAEKGL 120
Query: 121 ITAERGIETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 167
AERG+ETAEKEI +AV+F L+QAGAV AE VGVLVATS+VNGILGPEAQ+
Sbjct: 121 EAAERGVETAEKEIVTAVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQK 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EIT8 | 2.2e-77 | 100.00 | uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC1114349... | [more] |
A0A6J1I9D9 | 1.2e-75 | 98.79 | uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397... | [more] |
A0A0A0LJU7 | 2.1e-67 | 90.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1 | [more] |
A0A5D3CRC5 | 2.6e-65 | 89.76 | Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G... | [more] |
A0A1S3C6G5 | 2.6e-65 | 89.76 | uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=... | [more] |
Match Name | E-value | Identity | Description | |
XP_022928047.1 | 4.6e-77 | 100.00 | uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 unchar... | [more] |
XP_022971729.1 | 2.5e-75 | 98.79 | uncharacterized protein LOC111470397 [Cucurbita maxima] | [more] |
KAG6571416.1 | 3.7e-74 | 98.19 | hypothetical protein SDJN03_30331, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_004148045.1 | 4.3e-67 | 90.96 | uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical ... | [more] |
XP_038900735.1 | 2.4e-65 | 89.82 | uncharacterized protein LOC120087852 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT2G23670.1 | 2.7e-35 | 56.90 | homolog of Synechocystis YCF37 | [more] |