CmoCh20G011290 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTGTGTTCTCTGGGATAAGCATGCCGTTGCTGAGGTGGACATCCGACGAAGAGAGGCGGGCCCACGAGAGTAGTGGACCTGGTGGGTGTAGCCGCAGTGTCTCCTTCACCACCGCCTGTAAGTACGGCAGATTCGCCACGTCAGCGTCTGAGAGGCTCCTTCCGCCTATAGCGGTGGCGATTTCCCTCGCGACTTCTCCCTGTATCTCCGGATGTAAAATTAACTCCGCCACCACCCACTCCGTCAGCAGCGCCGTCGTGTCCGTACCCCGGAAAATCATTTCCTTCACCAAAAAAAAAAAAAAAACCCTCAATCCAAAATTGAATTTTTTAATAAAAAATTAATTAAATTTACGTACCCATAAGACAGCCACCATGTCATCCTCGTTGAGCTTTTCATCGCCGTCGAGAGACAGCAAAACGTCGACGAAATCGGAATCATCCGACGGAGCTTCACCGCGGCGGTGCTCATCAATTACGCCGCGGACAAATTCATTAACTTTAGGGACGAGTCGGGCGCAGCGGTGGCGGATACGACCCGGGTCGTAGAATCCACTAAGCCAGGGGAGATAATCCGACCAATTAAACGCACCGAGCAGCTCGAACCCTTCACGAACCAACTCGCGAACCGTTTCTAA ATGGCGGTTGTGTTCTCTGGGATAAGCATGCCGTTGCTGAGGTGGACATCCGACGAAGAGAGGCGGGCCCACGAGAGTAGTGGACCTGGTGGGTGTAGCCGCAGTGTCTCCTTCACCACCGCCTGTAAGTACGGCAGATTCGCCACGTCAGCGTCTGAGAGGCTCCTTCCGCCTATAGCGGTGGCGATTTCCCTCGCGACTTCTCCCTGTATCTCCGGATGTAAAATTAACTCCGCCACCACCCACTCCGTCAGCAGCGCCGTCGTCCACCATGTCATCCTCGTTGAGCTTTTCATCGCCGTCGAGAGACAGCAAAACGTCGACGAAATCGGAATCATCCGACGGAGCTTCACCGCGGCGGTGCTCATCAATTACGCCGCGGACAAATTCATTAACTTTAGGGACGAGTCGGGCGCAGCGGTGGCGGATACGACCCGGGTCGTAGAATCCACTAAGCCAGGGGAGATAATCCGACCAATTAAACGCACCGAGCAGCTCGAACCCTTCACGAACCAACTCGCGAACCGTTTCTAA ATGGCGGTTGTGTTCTCTGGGATAAGCATGCCGTTGCTGAGGTGGACATCCGACGAAGAGAGGCGGGCCCACGAGAGTAGTGGACCTGGTGGGTGTAGCCGCAGTGTCTCCTTCACCACCGCCTGTAAGTACGGCAGATTCGCCACGTCAGCGTCTGAGAGGCTCCTTCCGCCTATAGCGGTGGCGATTTCCCTCGCGACTTCTCCCTGTATCTCCGGATGTAAAATTAACTCCGCCACCACCCACTCCGTCAGCAGCGCCGTCGTCCACCATGTCATCCTCGTTGAGCTTTTCATCGCCGTCGAGAGACAGCAAAACGTCGACGAAATCGGAATCATCCGACGGAGCTTCACCGCGGCGGTGCTCATCAATTACGCCGCGGACAAATTCATTAACTTTAGGGACGAGTCGGGCGCAGCGGTGGCGGATACGACCCGGGTCGTAGAATCCACTAAGCCAGGGGAGATAATCCGACCAATTAAACGCACCGAGCAGCTCGAACCCTTCACGAACCAACTCGCGAACCGTTTCTAA MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVVHHVILVELFIAVERQQNVDEIGIIRRSFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTNQLANRF Homology
BLAST of CmoCh20G011290 vs. ExPASy TrEMBL
Match: A0A0E0EXJ1 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 6.6e-11 Identity = 57/176 (32.39%), Postives = 85/176 (48.30%), Query Frame = 0
BLAST of CmoCh20G011290 vs. ExPASy TrEMBL
Match: A0A0P0XUW8 (Os10g0403200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0403200 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.4e-06 Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of CmoCh20G011290 vs. ExPASy TrEMBL
Match: A0A0P0W003 (Os03g0603200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0603200 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05 Identity = 37/81 (45.68%), Postives = 41/81 (50.62%), Query Frame = 0
BLAST of CmoCh20G011290 vs. NCBI nr
Match: CAB3457671.1 (unnamed protein product [Digitaria exilis]) HSP 1 Score: 85.1 bits (209), Expect = 6.6e-13 Identity = 67/203 (33.00%), Postives = 102/203 (50.25%), Query Frame = 0
BLAST of CmoCh20G011290 vs. NCBI nr
Match: KAF7840019.1 (hypothetical protein G2W53_008501 [Senna tora]) HSP 1 Score: 75.1 bits (183), Expect = 6.8e-10 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CmoCh20G011290 vs. NCBI nr
Match: BAT10752.1 (Os10g0403200, partial [Oryza sativa Japonica Group]) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05 Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of CmoCh20G011290 vs. NCBI nr
Match: KAB8112670.1 (hypothetical protein EE612_051290, partial [Oryza sativa]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05 Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of CmoCh20G011290 vs. NCBI nr
Match: KAB8092580.1 (hypothetical protein EE612_018804, partial [Oryza sativa] >BAS85207.1 Os03g0603200, partial [Oryza sativa Japonica Group]) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-05 Identity = 37/81 (45.68%), Postives = 41/81 (50.62%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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