CmoCh20G009580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G009580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ribosomal protein S5 family protein
Location	Cmo_Chr20: 5212321 .. 5217799 (+)
RNA-Seq Expression	CmoCh20G009580
Synteny	CmoCh20G009580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGCAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGGTATGACCATTTATTTTGGAGCATATCAACATTTCCTACTTGTTCTTGTTTTTAGTGTATGGAAGGATTTTGGGAATGCATATTGATTCAAATTTTGTATACTCCAAATGTAGCTAGTGGCATCCTCAAGTTTTTGTTTCGTTGTTTGATACTTATTGCAATAGACTAACATGTGGGTTACACTTTTTATAACGTTCTTCATATGGAATGAGGCATGAACATATGTATTGAAAACGTTGCAGAATTCAGCAGCTATTAATTGATACCATTATTCGATCTTAACATCTTAACCAAAAGAAAATTCATATAGCCATTGTTTTTGTTTTTGCAACTTTTTGGACTTGTGTTAAAATCTGTCGTCTCCAACTGTTTTTTTACAGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAATGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACACGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGTATGTTACTCCATCATCCTTTCTATGCCTTTACTTTATTGTCTGTCTTCTTTTGGCAGTTGAAATTTCGTTGTTCTACACCGGGATTTGAAGAACACGCTGTGTTGTAAGCTAAGCTGTTCCCCTTGTAGACGGAGGAGATATAGAAAGTGTGGTCTAAGTTGAGGCTCTCTCTCCCTCACTTTTGCTTGTTACAAATTGATTGCAGGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGTACGCACCCACCCTTCTAAATATCCTATCCAAATAATTATGCACTTGATGATTGTAAACTTTGGATGATACAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGTAGACTCCGTTTACTTGTTTACTTTTATTGAAATTTGAGAATTTGATAAAATGCCTGAAGTTTGAGTTCTAGAATGATAGTGAATTAATTTTTAAGGTGTACTACAATTGTGTTTTGATTGAAGAGATTGAATTTGTGGAGATCCGAAGTGAGAGATACAAAATTTATGGTAGTATTTTGTTCTTTGAATCATTATTATATATAGGAAACCGAAGCCGTTCGTTGTTATGTTGAAATGGGTTACAAAAGTACACAAAACATAGAACGGAGGAGGAAAGGAGTTTGTCGAGGGCCTTTGAGAGGCGAGAGTGTTGCGCTGAAAAGTGCATTTGAAGTCTTAATTAGGAGGGAGGACACTAGTTTGAGACAAAAGTCGAAGGTCAAGCAGGCTAAAATGGTGGATGAAAACTCCACTTTTTTCCCATAGTATGGTGAGGGGTAGGAGAAATGAACTTGATATGAACCAAGAGACATCAATCATACAATATGCTTCAATGAAGATGTGAAGAAAAGGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGCTACATTGAAGAAGAATAAAGTTTGATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATAATGGCTAATTATGGCCATAAAGTGTGAATGTTACAACTTTTGTAATGCCTTTAATAGTTTCATTTTGAGGCTATATAAAGCCTTGTATGTTATATTTGTAAGGAAGACTTAGAAGATATATTAAAAGAAGCATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTATTTGCAACTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGTCTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATCTTGCTTCTGGAGTGATTCGAATCTCAAACAAAGTGTTCTTTGCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTATTGATTCCTTATCTTATCATTTGGTATCAGAGCCAGGTTTGGATTACCTTATTGATCAATAAGGTAATCCAAATGATAAGATAAGGAATCAATACAAGGGGAGTAAGATTCGGATTACCTTGTTGATCGAATATCTCAAGCAAAGAACACTTTGTTTGAGATTCGAATCACTCCAGAAGCAAGATCGATCATGTCTAGCTTCAATGATTCTTGTTGATCAAATATCTCAAGACAAGAACACTTGATTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAACCTAAACTACATAGAGTTGCAAATAAACTTAGCCATTGGCTAAAGAAAAGCACAAATGCTTCTTTTAATATATCTTCTAAGTCTTCCTTACAAATATAACATACAAGGCTTTATATAGCCTCAAAATGAAACTATTAAAGGCATTACAAAAGTTGTAACATTCACACTTTATGGCCATAATTAGCCATTATGTAAATGTAACCGAAATTAAATAAAATGTCTTAAAATACAATAACTCTAAATTATAACCCACCCAAAATTTACAACAATCAAACTTTATTCTTCTTCAATGTAGCATGAATTGAAACATCTTTTGATAATTTTGACAACCTTTTCTTCACATCTTCATTGAAGCATATTGTATGATTGATGTCTCTTGGTTCATATCAGAACTCGATTGAGTTCGTGGGGAACGAAGATGGAGTGGTCGTGATGCCCACCGCCTAGTGTGTTCCTAGTCCTTTCTTGGAAGGTTTAGACTGGTGTCCCATCTGTTGAGGATTATTGGGAGTGAGTCTCACGTTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGTGGAATACTATCTCCATTGGAATGAGACCTCTTGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACACCATCTTAGAAAGGGAAAGGGAAACAGAAGAGTTGGAAGCTCCTTTTACTTTGGGAGGAAATTTGCGTGGTAGTATTTGACTTCGATAGGAATAGATCGCTTGGTGGGTCCACTGACCCATAACCTGAAGAGCGTTAGCCCGAATCGACTTGCATTAACCAAACTACCTGAGCCCGAATCCACTCTTGCTACCAACTTGCTCAACCGATTCCCCTATGACTCTTTACGCTTCCATGAGTGTGTTTCACTGTCTGGGCAAGATTTTGGCACCTCTTTAGAGGTTCAAACACATCTTCTAGGATCCATGTGGGGTTCCTATTGATTTGTTCCCATGAAAGCATCTTTGGAAACAGTAATGTCTGTTTTGTCAACATTTGCTTCAATCATCATCGTTGATCCTGTTGGAGAGCCAGAGACCAACACCCTTGAGTCCCCACTGAATTAGAGCCCCCCTTCCCACCTATCTGCCTATAAATGATGTTAGCTCAAGATCCATCAGCCACCTTTTTGTTCTATGAGAGATAGCAAAAAGAAAAAATGTTCTATATCAAATTGCCTTGGTGTGGCACAATGAGCATTTTGCCTTGTAATTTTTCAGTTTACGTTTTAAATGTGTATTGATGCTCTTAAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATTCGACCATTTCTAGTTTTCTTCTCTGCATCGAAAGTTCTTATCTCGGATCGAGGAGTCCCAGCCCTCCTGCACCGGGAAAACATCAGGGGCTAAATACCTGTGGTGGACAAGGCGGATGAGTCGTATATACTGACTGCTGGACAACAACGACAACCGTCTCTTGTCTAGTTTTGGATGATCCATATCCAGTTGATCGATTTCTGTCATTTGATAGAAAGTTATGGTTCCTTTCTGTTCTTAAATCTCCTTTTTGTTGTTGTGTTTGTTAAGGTATATCTTTGGCCAGCATCAACTAGCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTAATTTCTTCATCTCCTTTGTTGTGGAGATCAACATAAAATGTATTCTCTCTTCCCTCCTCCACTGCCTCTAACTCGAGTTCAAATAACAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAGTTAGTAGCTATGAAATTAACATTGTTAATATATCTTCATACAACATTCTGCTAACAATTATATTATACGTCATGTGTTCCAGATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGATACGAGGTTTTCTTTTTCCTTCCTTTTCCATACTTTCTCGGGTCGAGTCTGTTCTTTTTGTTGATTCTAACTCGAAAAGGTATTGGTATTGGTTTTGAATGAGATGTAGAAAATGGAATTTTGGTATTTAACTTAAGAAATCATGGATCGTAACTTGCGTTAAACTTTTG

mRNA sequence

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGCAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGGTATGACCATTTATTTTGGAGCATATCAACATTTCCTACTTGTTCTTGTTTTTAGTTGGCATCCTCAAGTTTTTGTTTCGTTGTTTGATACTTATTGCAATAGACTAACATACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAATGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACACGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTAGCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGATACGAGGTTTTCTTTTTCCTTCCTTTTCCATACTTTCTCGGGTCGAGTCTGTTCTTTTTGTTGATTCTAACTCGAAAAGGTATTGGTATTGGTTTTGAATGAGATGTAGAAAATGGAATTTTGGTATTTAACTTAAGAAATCATGGATCGTAACTTGCGTTAAACTTTTG

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGCAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGGTATGACCATTTATTTTGGAGCATATCAACATTTCCTACTTGTTCTTGTTTTTAGTTGGCATCCTCAAGTTTTTGTTTCGTTGTTTGATACTTATTGCAATAGACTAACATACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAATGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACACGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTAGCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLLVLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

Homology

[Close]

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot
Match: Q1IFU9 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rpsE PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.9e-20
Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 378 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKG---PAAYEKCFQ--- 437
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K    PAA +K  +   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 438 -NLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKV 497
            N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 498 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 527
            GS NP N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

[Close]

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot
Match: Q4K550 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsE PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.7e-20
Identity = 58/156 (37.18%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 378 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKG---PAAYEKCFQ--- 437
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K    PAA +K  +   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 438 -NLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKV 497
            N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 498 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 527
            GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

[Close]

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot
Match: C3K2V9 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.7e-20
Identity = 59/156 (37.82%), Postives = 93/156 (59.62%), Query Frame = 0


Query: 378 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKG---PAAYEKCFQ--- 437
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K    PAA +K  +   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 438 -NLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKV 497
            N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 498 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 527
            GS NP N + A FK L A+++P+ I  K G TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

[Close]

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot
Match: A5VXR4 (30S ribosomal protein S5 OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=rpsE PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-19
Identity = 58/156 (37.18%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 378 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKG---PAAYEKCFQ--- 437
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K    PAA +K  +   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 438 -NLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKV 497
            N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 498 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 527
            GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164

[Close]

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot
Match: B0KK84 (30S ribosomal protein S5 OS=Pseudomonas putida (strain GB-1) OX=76869 GN=rpsE PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-19
Identity = 58/156 (37.18%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 378 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKG---PAAYEKCFQ--- 437
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K    PAA +K  +   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 438 -NLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKV 497
            N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 498 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 527
            GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164

[Close]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 932.2 bits (2408), Expect = 9.8e-268
Identity = 492/537 (91.62%), Postives = 492/537 (91.62%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTET              
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL
Match: A0A6J1G7C4 (uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC111451428 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.5e-252
Identity = 464/537 (86.41%), Postives = 481/537 (89.57%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV +NPI+TP+HISR+IS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEE +DSDSDE+DERFSSES+KKR DEFERKFKRHEELLK+FTET              
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NI+DAFKWMSKIDKFEQKHF LRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIEDAFKWMSKIDKFEQKHFWLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+A+GKEKFILQQKLNRAMRLVEWKEAYDPN PANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQV+KY+ALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHA+QTEYKKTKVYLWPAST+TGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKN+KSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL
Match: A0A6J1KZ96 (uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608 PE=3 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 9.8e-252
Identity = 461/537 (85.85%), Postives = 480/537 (89.39%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAF+WSRL+LNQVV QNPIKTP+HISR+IS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED EDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEE +DSDSDE+DERFSSES+KKRFDEF+RKFKRHEELLK+FTET              
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFKRKFKRHEELLKNFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NI+DAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIEDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+A+GKEKFILQQKLNRA RLVEWK+AYDPN PANYGVIQHEQVGPSVDLMEQSGFE+EK
Sbjct: 241 KVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEEEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQV+KY+ALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHA+QTEYKKTKVYLWPA T+TGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPAPTTTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKN+KSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL
Match: A0A6J1D5I3 (uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017222 PE=3 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 1.7e-243
Identity = 459/540 (85.00%), Postives = 475/540 (87.96%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPK---TPATRCYSTA 60
           MVNKSQAFSWSRL+L+QVV QNP KTPLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 NLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQH 180
           +LNAYEE TDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE            
Sbjct: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTE------------ 180

Query: 181 FLLVLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELM 240
                                    + N+DDAFKWM+KIDKFEQKHF LRPEYRVIGELM
Sbjct: 181 -------------------------SENMDDAFKWMNKIDKFEQKHFGLRPEYRVIGELM 240

Query: 241 NRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFE 300
           NRLK+A+GKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQ EQVG SVDL+EQSGF 
Sbjct: 241 NRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQQEQVGSSVDLLEQSGFA 300

Query: 301 KEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 360
           KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI
Sbjct: 301 KEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEI 360

Query: 361 RDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGY 420
           RDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKY+ALLACGNYHGIVGY
Sbjct: 361 RDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGY 420

Query: 421 AKAKGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKA 480
           AKAKGPA       AYEKCFQNLHYVERHEEHTIAHAVQT YKKTKVYLWPAST TGMKA
Sbjct: 421 AKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTCTGMKA 480

Query: 481 GKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           GKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 GKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 501

[Close]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL
Match: A0A6J1J864 (uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333 PE=3 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 1.5e-239
Identity = 449/515 (87.18%), Postives = 458/515 (88.93%), Query Frame = 0


Query: 25  KTPLHISRQISPLQRFPFEETPKTPATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG 84
           KTPL ISR+ISPLQRFPFEETPKTPAT CYST SARVVQD LAEVEKEKQREREQRRRAG
Sbjct: 19  KTPLQISRKISPLQRFPFEETPKTPATLCYSTTSARVVQDFLAEVEKEKQREREQRRRAG 78

Query: 85  LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEATDSDSDEDDERFSSESVKK 144
           LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEE TDSDSDEDDERFSSESVKK
Sbjct: 79  LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPTDSDSDEDDERFSSESVKK 138

Query: 145 RFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLLVLVFSWHPQVFVSLFDTYCNRLTY 204
           RFDEFERKFKRHEEL K+FTET                                      
Sbjct: 139 RFDEFERKFKRHEELFKNFTETD------------------------------------- 198

Query: 205 NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKMADGKEKF-ILQQKLNRAMRLVE 264
           NIDDAFKWMSKIDKFEQKHFRLRPEY+VIGELMNRLK+ADGK KF ILQQKLNRA+RLVE
Sbjct: 199 NIDDAFKWMSKIDKFEQKHFRLRPEYQVIGELMNRLKVADGKGKFIILQQKLNRAIRLVE 258

Query: 265 WKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDI 324
           WKEAYDPNNPANYGVIQH++VGPSVDLME SGFEKEKQIIQGVDDDDEEEFDDMKERDDI
Sbjct: 259 WKEAYDPNNPANYGVIQHKRVGPSVDLMELSGFEKEKQIIQGVDDDDEEEFDDMKERDDI 318

Query: 325 LLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK-GFDV 384
           LLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK  FDV
Sbjct: 319 LLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKVWFDV 378

Query: 385 KLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPA-------AYEKCFQNLHY 444
           KLIDVNRTCKVTKGGQVVKY+ALLACGNYHGIVGYAKAKGPA       AYEKCFQNLHY
Sbjct: 379 KLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHY 438

Query: 445 VERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 504
           VERHEEHTIAHAVQTEYKKTKVYLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKVVGSRN
Sbjct: 439 VERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 496

Query: 505 PHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           PHN LKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 499 PHNNLKALFKALNAIETPKDIQEKFGRTVVEKYLL 496

[Close]

BLAST of CmoCh20G009580 vs. NCBI nr
Match: XP_022943762.1 (DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata])

HSP 1 Score: 932.2 bits (2408), Expect = 2.0e-267
Identity = 492/537 (91.62%), Postives = 492/537 (91.62%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTET              
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. NCBI nr
Match: KAG6571211.1 (hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 924.5 bits (2388), Expect = 4.2e-265
Identity = 487/537 (90.69%), Postives = 491/537 (91.43%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIK+PLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKSPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEE TDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTET              
Sbjct: 121 AYEEPTDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST+TGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. NCBI nr
Match: XP_023512942.1 (uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 923.7 bits (2386), Expect = 7.2e-265
Identity = 487/537 (90.69%), Postives = 491/537 (91.43%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTET              
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NIDDAFKWMSKIDKFEQKHF LRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIDDAFKWMSKIDKFEQKHFWLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKY+ALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST+TGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. NCBI nr
Match: KAG7011014.1 (rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 918.7 bits (2373), Expect = 2.3e-263
Identity = 488/545 (89.54%), Postives = 491/545 (90.09%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTET              
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD 360
           QIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD
Sbjct: 301 QIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD 360

Query: 361 LAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAK 420
           LAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAK
Sbjct: 361 LAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAK 420

Query: 421 AKGPA--------------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTS 480
           AKGPA              AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST+
Sbjct: 421 AKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTT 480

Query: 481 TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVV 531
           TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVV
Sbjct: 481 TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVV 508

[Close]

BLAST of CmoCh20G009580 vs. NCBI nr
Match: XP_023533655.1 (uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 891.7 bits (2303), Expect = 3.0e-255
Identity = 467/537 (86.96%), Postives = 484/537 (90.13%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV QNPIKTP+HISR+IS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETGMTIYFGAYQHFLL 180
           AYEE +DSDSDE+DERFSSES+KKRFDEFERKFKRHEELLK+FTET              
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFERKFKRHEELLKNFTETD------------- 180

Query: 181 VLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240
                                   NI+DAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL
Sbjct: 181 ------------------------NIEDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRL 240

Query: 241 KMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 300
           K+A+GKEKFILQQKLNRAMRLVEWKEAYDPN+PANYGVIQHEQVGPSVDLMEQSGFEKEK
Sbjct: 241 KVAEGKEKFILQQKLNRAMRLVEWKEAYDPNSPANYGVIQHEQVGPSVDLMEQSGFEKEK 300

Query: 301 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360
           Q+IQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 301 QMIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 360

Query: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKA 420
           AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQV+KY+ALLACGNYHGIVGYAKA
Sbjct: 361 AEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKA 420

Query: 421 KGPA-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKT 480
           KGPA       AYEKCFQNLHYVERHEEHTIAHA+QTEYKKTKVYLWPAST+TGMKAGKT
Sbjct: 421 KGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKT 480

Query: 481 VQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 531
           VQTVLNLAGFKN+KSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 VQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh20G009580 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 590.9 bits (1522), Expect = 1.0e-168
Identity = 331/565 (58.58%), Postives = 408/565 (72.21%), Query Frame = 0


Query: 4   KSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQR-----------------FPFEETP 63
           +++A SW RLLL     +NP  +    SRQIS L                   FP  +TP
Sbjct: 4   RTRASSWPRLLL----RRNPRSS---FSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTP 63

Query: 64  --KTPATRCYSTASA------RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDY 123
              +   R +S+++       RVV++L+AEVEKEKQRERE+R+R GLD KDID ED EDY
Sbjct: 64  WISSQRYRFFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDY 123

Query: 124 MGVGPLIEKLEKEKLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEE 183
           +G+ P IEKL+K+ LKD G LN  EE++DSDS+ D+     E  +K+ D F +KF+RH+E
Sbjct: 124 LGIEPFIEKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEE--RKKEDIFNKKFQRHKE 183

Query: 184 LLKHFTETGMTIYFGAYQHFLLVLVFSWHPQVFVSLFDTYCNRLTYNIDDAFKWMSKIDK 243
           LL+  T+                                     +  +D+AF+WM+K+DK
Sbjct: 184 LLQTLTK-------------------------------------SETLDEAFRWMNKLDK 243

Query: 244 FEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGV 303
           FE+KHF+LRPEYRVIGELMNRLK+A+GKEKF+LQQKLNRAMRLVEWKEA+DPNNPANYGV
Sbjct: 244 FEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKLNRAMRLVEWKEAFDPNNPANYGV 303

Query: 304 IQHEQVGPSVDLMEQSGFEKEKQII------QGVDDDDEEEFDDMKERDDILLEKLNAID 363
           I+ + V       +  G E+E++++         DDDDEEEFDDMKERDDILLEKLNAID
Sbjct: 304 IERDNV-------QGGGEEREERLVADGPKDDNDDDDDEEEFDDMKERDDILLEKLNAID 363

Query: 364 KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCK 423
           KKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR+PLYRKG+DV +IDV + CK
Sbjct: 364 KKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEKKRQPLYRKGYDVHVIDVKKVCK 423

Query: 424 VTKGGQVVKYSALLACGNYHGIVGYAKAKGPA-------AYEKCFQNLHYVERHEEHTIA 483
           VTKGG+V +Y+AL+ CGNY GI+GYAKAK          AYEKCFQNLHYVERHEEHTIA
Sbjct: 424 VTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQKAYEKCFQNLHYVERHEEHTIA 483

Query: 484 HAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFK 531
           HA+QT YKKTK+YLWPA T+TGMKAG+ V+T+L LAGFKN+KSKV+GSRN +NT+KA+ K
Sbjct: 484 HAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAGFKNIKSKVIGSRNSYNTVKAVLK 515

[Close]

BLAST of CmoCh20G009580 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-15
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 370 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGP---AAY 429
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK     AA 
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 430 EK----CFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAG 489
           +K      +N+  V   +  T  H  + +Y   KV L PAS  TG+ AG  V+ VL +AG
Sbjct: 197 QKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 256

Query: 490 FKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFG 522
            +N   K +GS N  N  +A   A+  +   +D+ ++ G
Sbjct: 257 VENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

The following BLAST results are available for this feature:

BLAST of CmoCh20G009580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1IFU9	5.9e-20	37.82	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rp...	[more]
Q4K550	7.7e-20	37.18	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL ...	[more]
C3K2V9	7.7e-20	37.82	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=...	[more]
A5VXR4	2.3e-19	37.18	30S ribosomal protein S5 OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / ...	[more]
B0KK84	2.3e-19	37.18	30S ribosomal protein S5 OS=Pseudomonas putida (strain GB-1) OX=76869 GN=rpsE PE...	[more]

BLAST of CmoCh20G009580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXC7	9.8e-268	91.62	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G7C4	1.5e-252	86.41	uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ96	9.8e-252	85.85	uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608...	[more]
A0A6J1D5I3	1.7e-243	85.00	uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1J864	1.5e-239	87.18	uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333...	[more]

BLAST of CmoCh20G009580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943762.1	2.0e-267	91.62	DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD...	[more]
KAG6571211.1	4.2e-265	90.69	hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023512942.1	7.2e-265	90.69	uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943....	[more]
KAG7011014.1	2.3e-263	89.54	rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533655.1	3.0e-255	86.96	uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656....	[more]

BLAST of CmoCh20G009580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64880.1	1.0e-168	58.58	Ribosomal protein S5 family protein	[more]
AT2G33800.1	5.9e-15	32.70	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 59..86
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	COILS	Coil	Coil	coord: 325..345
None	No IPR available	COILS	Coil	Coil	coord: 350..373
None	No IPR available	GENE3D	3.30.160.20		coord: 330..432 e-value: 3.1E-15 score: 58.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..137
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 204..530
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 63..165
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 375..438
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 380..423 e-value: 1.2E-11 score: 44.4
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 380..462 score: 12.907026
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 451..518 e-value: 4.4E-22 score: 77.3
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 439..527 e-value: 6.2E-28 score: 98.2
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 204..530 coord: 63..165
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 442..520

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009580.1	CmoCh20G009580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome