CmoCh20G009310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G009310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	binding partner of ACD11 1-like
Location	Cmo_Chr20: 4822403 .. 4825087 (+)
RNA-Seq Expression	CmoCh20G009310
Synteny	CmoCh20G009310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAGTAAAAAAAGAAAAAAAAAAAAGAAAAATAGAATGAGTCGGTTTCTAAACAACCGCCAAGCCACAACACACCTCTCACGCCCATTCTATCTTCTTCTTCTTCTTCTCTCTCTAAGAACTTGGATTGGGAAACCCCTCGGGTGGATCACACAGAAGAATCATGGCGGTTGGTGTTCAATTTTTGTTTATTTTTTATGTTCGTTGTCTTCACTATCTGTTTGATTTCTGGCCATGTTATTTTCCGAAATTTTCATTCTGTTCTTGGGCGTGATTACTACTTGTTATCACTTAGGATTGAAGAAACGATCAGTTTGTTTCATTTTTTTTCCTCCGTGGTTTTTATGAACGAATGCGTGAATTCGTATTGAGGAGATGGAGAATGTGTACCTCCGGTGTCGTAATTTCATAATACTGGAATTTCGGAAGCACCGAAACCGTCGAAATTCTTCTTTGATTTTGGTTACTTTTGTGTAATCGTTACAGTTTCTTTGTTTTGTTTATGGTGGTTGCAGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGTAAGATTGATCTACTAATGTCTCTAAATTGTACTTCGTCTGTTTTTTTAGTTCGATTGGAAACTGGTGATGAGCAGTGGAATTCTTGATCTTTTTTCTTCTCTTCATTTTGTTCTCCAACTGTTTTTCCATATGCATTTTCATTTATTTTCCTTTGTTTTCTTCTAGGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGTCCAAACCATTCTCTATTCTTCTCTTTCTTGATTTCGATTGTCTTTCTTCTTGGTCAGTAGATCATCTGAATGATTTTATTTTTAGTGTTCTTATGCATTTAAAGTTTCATCAGAAATCGTTTCCGGCAAGTAGAAATTCTCTTCTGTTATGAAATCTGGCTCCAAGAAATGATATGTTTTGGAAATTACTTAGAACAGAGTTTTATTCTTCAGAAAAGAGAAGATTTAACAAGTTCAACTATTCAATATGGTTGCATAATGTGTTCAGTCGCTTTTGAATGCGTAGATGAATAGTTAAATTCTTTCTCATACATCTAAGATCGAAAAATACTTTAGTTCTTTCTCTCTCATTAAATAATCCCTCGGCTACCTCGACTGACCGACCGAGAAAAGAAAGTGAAAGAGACTTCTTTCATTCATATGGATTTTGGTTTTTCTGCATGTATCCATGAGATAATTCTCACATCTTTGTTGAAAAATTCTTTTGTAATTCCTTACTTAAGGATTCAGTATCCTTAAGTAAATACCGAGTCTCTGCCTACACAAGAAAATTGTTGATAAAACTCCAAAATGACACTTCTCTTCCATTTTTTTTTTCTCCTTATCATTCAGAAAAGACAAAAAAAATTCTATAGTAGCAAACATTCTAGAGAATTTCTCTTAGATTTGAATCCATAGCTGACGATAGAACTATAATAGATATCTATTATCGGTTTCCTACTCACACGAGCCCATATCCTTGCTTATGTTAACTTTTCCTAGAAGAAATTTGTGATAGAGGCTTTTTCTTGTTTCATCAACTAGAATTGGCCCTCTATCATCGATCGGGTGAGAGGAAAGTGACCTGTGATCTTACCTGACTAACTGTTTTGTGTCTCTCAGGGAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCAGTATTTTCGATCTTTACCCTTAGCAGTATTTTCGATCTCGTTACTTCAAATCCTGACATGAATGAATGAATAATCATGTTTCAGCAGGCTACAGAGAACACAGGCGCTGAAACTGCTGGAACTACTGGAACTACTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTTGGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGCTGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGAGCATCCCAATGTTTGGCCAAAACAATGTGAGGACCAATTCTTAGCTTGCTCTACTTTCATCTCAGTTGTCTGTCTGATATACTTTTAATGCTCTATTTTAGTTTAGTATTAGGGAGTGCGTACACACAAATAAGCTTACATTACATGCTTATGTTGTAATTCAACCATATGAAAACCATTTATGCTATGTGATAAAGAATCCATGAATGAAAAAAAAAGAGCTATTTTTTTGTTTCTATTGTA

mRNA sequence

AAAAAAAAAGTAAAAAAAGAAAAAAAAAAAAGAAAAATAGAATGAGTCGGTTTCTAAACAACCGCCAAGCCACAACACACCTCTCACGCCCATTCTATCTTCTTCTTCTTCTTCTCTCTCTAAGAACTTGGATTGGGAAACCCCTCGGGTGGATCACACAGAAGAATCATGGCGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCAGCTACAGAGAACACAGGCGCTGAAACTGCTGGAACTACTGGAACTACTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTTGGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGCTGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGAGCATCCCAATGTTTGGCCAAAACAATGTGAGGACCAATTCTTAGCTTGCTCTACTTTCATCTCAGTTGTCTGTCTGATATACTTTTAATGCTCTATTTTAGTTTAGTATTAGGGAGTGCGTACACACAAATAAGCTTACATTACATGCTTATGTTGTAATTCAACCATATGAAAACCATTTATGCTATGTGATAAAGAATCCATGAATGAAAAAAAAAGAGCTATTTTTTTGTTTCTATTGTA

Coding sequence (CDS)

ATGGCGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCAGCTACAGAGAACACAGGCGCTGAAACTGCTGGAACTACTGGAACTACTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTTGGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATAATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGCTGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGA

Protein sequence

MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

Homology

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BLAST of CmoCh20G009310 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-59
Identity = 133/254 (52.36%), Postives = 183/254 (72.05%), Query Frame = 0


Query: 3   MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLS 62
           +R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHS---AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSAMQ 122
           GA+I DQ + I  AP+Y+        PPAA    T+++GAE               S +Q
Sbjct: 65  GASIADQSVIIELAPNYS--------PPAAPHAETQSSGAE---------------SVVQ 124

Query: 123 KAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTV 182
           KAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++
Sbjct: 125 KAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSL 184

Query: 183 VNEKVREMDEKFQVSEKTKA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAA 242
           VNEK++ +D+ FQV+E+TK+        V++AGSA+M NRYV TG SW +  F RVA+AA
Sbjct: 185 VNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAA 232

Query: 243 VDVSQKTKEKMLAE 250
            +V QKTKEK+ AE
Sbjct: 245 GEVGQKTKEKVEAE 232

[Close]

BLAST of CmoCh20G009310 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06
Identity = 59/238 (24.79%), Postives = 100/238 (42.02%), Query Frame = 0


Query: 6   VRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGAT 65
           V VTN+S   TEK + +FFSF G++  +   K  E  Q A + F+ P   +T++LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGET-QTAKIQFERPSATKTALLLQDAL 64

Query: 66  IVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSAMQKAE 125
           +    I I S                           E  G   TT   G  G    + E
Sbjct: 65  LGQNKIQITS---------------------------EDGGAASTTDQGGAGGDQAARQE 124

Query: 126 D-----VVSSMLAKGFILGKDALNRAKSFDERHRLTST-ASLKVASLDQKIGLSEKISVG 185
           D     ++S +L++G+ L    L ++   D+ + ++S    +  ++L     ++E+    
Sbjct: 125 DKPRSAIISELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGILESALSGVRSVNERYH-- 184

Query: 186 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVD 238
              V EK  E+D KF +S+K    +N   S + T  + +   +  +   Q+V  A  D
Sbjct: 185 ---VTEKANEVDNKFAISDK----LNRTSSLVSTYFHKALETAAGTSAGQKVQNAYED 205

[Close]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL
Match: A0A6J1FT10 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448198 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.6e-132
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT
Sbjct: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240
           TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ
Sbjct: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240

Query: 241 KTKEKMLAEDQQGKHGTPNVKP 263
           KTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 KTKEKMLAEDQQGKHGTPNVKP 262

[Close]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL
Match: A0A6J1FRP4 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448198 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130
Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATENTGAETAGTTGTTGTTGTTGS 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATENTGAETAGTTGTTGTTGTTGS
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATENTGAETAGTTGTTGTTGTTGS 120

Query: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180
           AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG
Sbjct: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180

Query: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240
           TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS
Sbjct: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240

Query: 241 QKTKEKMLAEDQQGKHGTPNVKP 263
           QKTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 QKTKEKMLAEDQQGKHGTPNVKP 263

[Close]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL
Match: A0A6J1JGG3 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484286 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.8e-125
Identity = 253/262 (96.56%), Postives = 254/262 (96.95%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPA ENTGAETA    T GTTGTTGSA
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPAAENTGAETA---ETAGTTGTTGSA 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           MQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGT
Sbjct: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHQLTWTASSKVASLDQKIGLSEKISVGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240
           TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ
Sbjct: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240

Query: 241 KTKEKMLAEDQQGKHGTPNVKP 263
           KTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 KTKEKMLAEDQQGKHGTPNVKP 259

[Close]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL
Match: A0A6J1J7Z5 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484286 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 253/263 (96.20%), Postives = 254/263 (96.58%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATENTGAETAGTTGTTGTTGTTGS 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP A ENTGAETA    T GTTGTTGS
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQAAENTGAETA---ETAGTTGTTGS 120

Query: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180
           AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVG
Sbjct: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHQLTWTASSKVASLDQKIGLSEKISVG 180

Query: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240
           TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS
Sbjct: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240

Query: 241 QKTKEKMLAEDQQGKHGTPNVKP 263
           QKTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 QKTKEKMLAEDQQGKHGTPNVKP 260

[Close]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL
Match: A0A0A0LRG1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.9e-100
Identity = 214/257 (83.27%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKD KGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPA--ASAPATENTGAETAGTTGTTGTTGTTG 120
           LSGATIVDQP+SI SAPDYNLPAV AS P A   S PA +NT         T+ T  T G
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNT---------TSTTNSTAG 120

Query: 121 SAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISV 180
           SAMQKAEDVVSSMLAKGF LGKDALN+AKSFDERH+LTSTAS KVASLDQKIGLSEKISV
Sbjct: 121 SAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISV 180

Query: 181 GTTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDV 240
           GTTVVNEKVREMDEKFQVSEKTKAAV+NAGSAIMTNRYV TGASWVSQTFQRVAKAAVDV
Sbjct: 181 GTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDV 240

Query: 241 SQKTKEKMLAEDQQGKH 256
           SQKTKEK+LAE+ QGKH
Sbjct: 241 SQKTKEKVLAEEDQGKH 248

[Close]

BLAST of CmoCh20G009310 vs. NCBI nr
Match: XP_022943432.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT
Sbjct: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240
           TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ
Sbjct: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240

Query: 241 KTKEKMLAEDQQGKHGTPNVKP 263
           KTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 KTKEKMLAEDQQGKHGTPNVKP 262

[Close]

BLAST of CmoCh20G009310 vs. NCBI nr
Match: XP_022943431.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130
Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATENTGAETAGTTGTTGTTGTTGS 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATENTGAETAGTTGTTGTTGTTGS
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATENTGAETAGTTGTTGTTGTTGS 120

Query: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180
           AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG
Sbjct: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180

Query: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240
           TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS
Sbjct: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240

Query: 241 QKTKEKMLAEDQQGKHGTPNVKP 263
           QKTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 QKTKEKMLAEDQQGKHGTPNVKP 263

[Close]

BLAST of CmoCh20G009310 vs. NCBI nr
Match: KAG6571186.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA   GTTGTTGTTGSA
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA---GTTGTTGTTGSA 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT
Sbjct: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240
           TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ
Sbjct: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240

Query: 241 KTKEKMLAEDQQGKHGTPNVKP 263
           KTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 KTKEKMLAEDQQGKHGTPNVKP 259

[Close]

BLAST of CmoCh20G009310 vs. NCBI nr
Match: KAG7010993.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125
Identity = 256/263 (97.34%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 12  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 71

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP-ATENTGAETAGTTGTTGTTGTTGS 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATENTGAETA   GT GTTGTTGS
Sbjct: 72  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATENTGAETA---GTAGTTGTTGS 131

Query: 121 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 180
           AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG
Sbjct: 132 AMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVG 191

Query: 181 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 240
           TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS
Sbjct: 192 TTVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVS 251

Query: 241 QKTKEKMLAEDQQGKHGTPNVKP 263
           QKTKEKMLAEDQQGKHGTPNVKP
Sbjct: 252 QKTKEKMLAEDQQGKHGTPNVKP 271

[Close]

BLAST of CmoCh20G009310 vs. NCBI nr
Match: XP_023512142.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.9 bits (1182), Expect = 1.5e-125
Identity = 254/262 (96.95%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA      GTTGTTGSA
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETA------GTTGTTGSA 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           MQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LTSTAS KVASLDQKIGLSEKISVGT
Sbjct: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240
           TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ
Sbjct: 181 TVVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQ 240

Query: 241 KTKEKMLAEDQQGKHGTPNVKP 263
           KTKEKMLAEDQQGKHGTPNVKP
Sbjct: 241 KTKEKMLAEDQQGKHGTPNVKP 256

[Close]

BLAST of CmoCh20G009310 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.0e-65
Identity = 144/261 (55.17%), Postives = 190/261 (72.80%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           M M TV+V+NVSLGAT+++L+EFFSFSG+I ++E + + E+ ++A+VTFKD +GAET++L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGATIVD  + +  APDY L     S    AS    ++  +  AG            S 
Sbjct: 61  LSGATIVDSSVIVSMAPDYQL-----SPEALASLEPKDSNKSPKAG-----------DSV 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           ++KAEDVVSSMLAKGFILGKDA+ +AKS DE+H+LTSTAS KVAS D+KIG ++KI+ GT
Sbjct: 121 LRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAK 240
            VV EKVRE+D+K+QVSEKTK+A       V+NAGSAIM NRYV TGA+WV+  F +VAK
Sbjct: 181 VVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAK 240

Query: 241 AAVDVSQKTKEKMLAEDQQGK 255
           AA +V QK KEK+   +++ K
Sbjct: 241 AAEEVGQKAKEKVGMAEEEDK 245

[Close]

BLAST of CmoCh20G009310 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 238.4 bits (607), Expect = 6.4e-63
Identity = 137/260 (52.69%), Postives = 194/260 (74.62%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           M+M TV+V+NVSL ATE++L+EFFSFSG+I ++E + +N+  ++A+VTFKD +GAET++L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           L+G+TIVD  +++  +PDY LP  A      AS  + + +   ++ T           S 
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDA-----LASIESLKESNKSSSPTREDV-------SV 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
            +KAEDVVS M++KGF+LGKDA+ +AKS DE+H+LTSTAS +V S D++IG +EKI+ GT
Sbjct: 121 FRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKAA-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAK 240
           TVV+EKV+E+D+KFQV+EKTK+A       V+NAGSAIM NRYV TGA+WV+  F RV+K
Sbjct: 181 TVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSK 240

Query: 241 AAVDVSQKTKEKM-LAEDQQ 253
           AA +V QK KEK+ LAE+++
Sbjct: 241 AAEEVGQKAKEKVGLAEEEE 248

[Close]

BLAST of CmoCh20G009310 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-61
Identity = 135/254 (53.15%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 3   MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLS 62
           +R+V+V N+S GATE +++EFFSFSGE+E ++++  NE    A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNE--HSAYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSAMQ 122
           GA+I DQ + I  AP+Y+        PPAA    T+++GAE               S +Q
Sbjct: 65  GASIADQSVIIELAPNYS--------PPAAPHAETQSSGAE---------------SVVQ 124

Query: 123 KAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTV 182
           KAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++
Sbjct: 125 KAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSL 184

Query: 183 VNEKVREMDEKFQVSEKTKA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAA 242
           VNEK++ +D+ FQV+E+TK+        V++AGSA+M NRYV TG SW +  F RVA+AA
Sbjct: 185 VNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAA 233

Query: 243 VDVSQKTKEKMLAE 250
            +V QKTKEK+ AE
Sbjct: 245 GEVGQKTKEKVEAE 233

[Close]

BLAST of CmoCh20G009310 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-61
Identity = 135/256 (52.73%), Postives = 185/256 (72.27%), Query Frame = 0


Query: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60
           MA+R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++L
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHS---AYVTFKETQGAETAVL 60

Query: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSA 120
           LSGA+I DQ + I  AP+Y+        PPAA    T+++GAE               S 
Sbjct: 61  LSGASIADQSVIIELAPNYS--------PPAAPHAETQSSGAE---------------SV 120

Query: 121 MQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGT 180
           +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT
Sbjct: 121 VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGT 180

Query: 181 TVVNEKVREMDEKFQVSEKTKA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAK 240
           ++VNEK++ +D+ FQV+E+TK+        V++AGSA+M NRYV TG SW +  F RVA+
Sbjct: 181 SLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQ 230

Query: 241 AAVDVSQKTKEKMLAE 250
           AA +V QKTKEK+ AE
Sbjct: 241 AAGEVGQKTKEKVEAE 230

[Close]

BLAST of CmoCh20G009310 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-60
Identity = 133/254 (52.36%), Postives = 183/254 (72.05%), Query Frame = 0


Query: 3   MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLS 62
           +R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHS---AYVTFKETQGAETAVLLS 64

Query: 63  GATIVDQPISIVSAPDYNLPAVAASDPPAASAPATENTGAETAGTTGTTGTTGTTGSAMQ 122
           GA+I DQ + I  AP+Y+        PPAA    T+++GAE               S +Q
Sbjct: 65  GASIADQSVIIELAPNYS--------PPAAPHAETQSSGAE---------------SVVQ 124

Query: 123 KAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTV 182
           KAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++
Sbjct: 125 KAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSL 184

Query: 183 VNEKVREMDEKFQVSEKTKA-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAA 242
           VNEK++ +D+ FQV+E+TK+        V++AGSA+M NRYV TG SW +  F RVA+AA
Sbjct: 185 VNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAA 232

Query: 243 VDVSQKTKEKMLAE 250
            +V QKTKEK+ AE
Sbjct: 245 GEVGQKTKEKVEAE 232

The following BLAST results are available for this feature:

BLAST of CmoCh20G009310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.5e-59	52.36	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	3.1e-06	24.79	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CmoCh20G009310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT10	6.6e-132	100.00	binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FRP4	1.6e-130	99.62	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JGG3	7.8e-125	96.56	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1J7Z5	1.9e-123	96.20	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0LRG1	3.9e-100	83.27	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV...	[more]

BLAST of CmoCh20G009310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943432.1	1.4e-131	100.00	binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]	[more]
XP_022943431.1	3.3e-130	99.62	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
KAG6571186.1	1.4e-128	98.85	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7010993.1	1.1e-125	97.34	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512142.1	1.5e-125	96.95	binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh20G009310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	4.0e-65	55.17	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	6.4e-63	52.69	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	1.6e-61	53.15	binding partner of acd11 1	[more]
AT5G16840.3	1.6e-61	52.73	binding partner of acd11 1	[more]
AT5G16840.1	1.7e-60	52.36	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 1.5E-8 score: 44.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..69 e-value: 4.3E-8 score: 32.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 12.048673
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..74 e-value: 4.6E-11 score: 44.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..122
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..255
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 1..255
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009310.1	CmoCh20G009310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding