CmoCh20G008180 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G008180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr20: 4045330 .. 4049660 (+)
RNA-Seq ExpressionCmoCh20G008180
SyntenyCmoCh20G008180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTAGCCTAGTATTTGCTATTAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGTGTTCGTGTTCGTGTTCATAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCACCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGGTACCTCTCTCGCATTCTTTTGTTCAGATTCCATTTGATTAGCGATTAACATGAAATTGATGATATCGGTAATTAGCTCAGAAGCTTTTAGATTCGTTAATTTGTTGTATTCAATTTCATTTTTGATCTTCTGGGTGTTTAACATTTTTTGATTGCCATTTTGGGTTCTGCAATGGCTGCCTCTTGAAATTCAATGGTCACCGACTCACCGGTGTTTGGTCTTTTCCGTATGATTATGGCGGTTGTGCATAGTGTTTGAAGGCTGTCTTAACTTTATTTGATATGATATTCCTGTAGAATAAGCGAGTGTATAGATTCTATCGAACAAGTGAAGGGCATCTCTTTGTTGTATCCTTACTGGCCATGGAGACCAAAGGAACATCTTAAATGGAAGCCAATTGATTTCATGAATGGATGACCCCTTCATAATTGTAATAAGGAGATTGTTGGTGTTCATGGGGAGCTTAAACACCATGTCCCAAAAGGTCTTGAGCGAGGTGGCTCAATGAAAAGAGGCCTTGTGGGTTAAGCCGCCATAACCACATATCTTGATGTAGACGCGTGAAAGAAAAGACAAACAGACAGTAGAGATAATTTTGGGAACATTATTCTTAGGAGTAGGGACCTTACGGGATCGAAATGAAAACTGGACTACCCTTGCAGAGGAATGGCTAAGCATGGTTAGTACTATAAGTACAAGAAAAGACAAGACTATTAGCTGAATGAAGAATATAGAATGAGCTACATTAGTTACACTTAGAGGTTAGAAGTATGAGAGAAAGTAGGACTAGTTGCAAAAGACGGTTTCTCGGTAAGTGTAGGAATCGGTTGAATGAGCTACATTAATTTCATGTAGAAGTTAGAAGCATGAGAGAAATTAGGAGTACTCGCAAAAGACGATTTGTCGGTAAGTGTTTGTGGTGTCTATAGCATATCTGGGTAAGGATAATTTTGTGTTTACAGTTGATGGTAGGGATGGAATATTGGTGTCCGAGCTATGGTATGGTGTAGGGCCGTGCTGGTTAGAAAGAAACTAGAGGCTGTTTGAAGATAAATCCTCTACTTTTGAGTCCTTTTGTAGCTGTCTGCCTCTTGTGGTGTCACAATAATAGCAAATTCTCTTGTAATTTTCTTTTATTAGTAGTATTACTATTATTATCTTACAAACTAGAGAAAGAAAGAGCGGAATCTCTGTAGATCATGGCAAATTTCTTTTGTACTTATCAATTAGAAAAGCTCATGTGAAATTAGCTTCCCTGGGAGGGGGATGCCACTTCCCCTACATTTAGGTTGTGGGATCCCACATCAGTTGGAGAGAAGAACGAAGCATTCCTTATAAGGGTGTAGAAACCTCTCCCTAACAGATGTGTTTTAAAACCTTGAGGGGAAGTCCGAAAGGGAAAACCCAAAGAGAATCATATCTACTAGCGGTGAGCTTGGGCTGTTACAAAGATATCAAAGCCAGTCACCGAGCGGTGTGCCAGCGGGGACGCTGGCCTCCAAGGGCGGTGGATTGTGAGATCTCACATCAGTTGGTGAGGGGAACTAAGCATTTCTTATAAAAGTATGGAAATCTCTCTCTAACATACGCGTTTTAAAACCTAAAGGGGAAGTCCAAAAGAGAGCCCATAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTATATTACAAATGGTATCAGAGCTAGGTACTAGGCAGTGTGTCAACGGGGACGCTGGGCTCCCAAGGGCGGTGGATTGTGAGATCCCACATCGGTTGGAGCGGGAAACGGAACATTCCTTGTAAGAGTGTGGAAACCTTTCCCTAATAGACGCGTTTTAAAAAATGGTTTTAAGACTTCTTACAATTGGAACTTCACTTTGTTGGCATTGTAGTGCAATTACTTGTGTCCCTTGCCTCATTCACCTCGATCATTTTTTAGAATTTTCGTGGATTGAAGTTTGGTTTCCTTCAATATTTAGTAGTTCTTAATTACAAATAACATTAACATTTCATGATATATATAGTAACATTGATTCTTCTAAGCAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGTAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTTTTTAATATCTCAACTTTTCTTTGAGATGCAAAAAATATTAAGATAACATCATTTCCTTTCATGCTAAATTAATAAAAAAATATCTTTAAACTTTAAAAAAAAAAGTTTTAAAATACCCTCGAAACTATCAGTACTTTGTTTCATAATACTACTGACTTTCAAAAGTAGCATTAATACTCTTAATCTTTTAAAAAGTTATTACCCTTAGTAGTATATGGTCAAAACCGTTTATCTACATCCCATAGACTACCTCCCTCTTCAATTTCCTCGCCCTCCTAGGATTCAAAGGTATTTGTGAAACACTTCAGTTCAGATAGTTTAAGTGTATAAATGCTCTAATGTTAGTAGGTAAACATTAAAATGCTGTTTTAAGCTGAGTTCTTAATCTTATGAATGTGATCTTGACAATAAACATATGCTTGTTAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGGTACTACAAGTTACCATATCATTCTTTTCGACTACTAATATCTCTCAGTTTTTAGATAGATATCGGGTGAGGGCGTTCGAGATGTGGCTAGGTTTAATGCTTACTTGCGGGTGTTAGTCACTAGACGTGACCTTTCTGTAACTCTGAGTTCGCTCTTATTCATTTAAATCGAAGTCCTTATCGTTGTTAGAGTCAGACTCCTTTCATTGGGGCTTGTTTTTTTCGTATGTGCCTGTATATTCTTTCAATTCCCATTTGATCGAATTTAGCGTGAATCCTCGTCTAGATCTTCCTATAGGTTTTAGAGAGATATCGGGTGAAGGGGTTTGAGAGGTGGCTAGGTTTAACGCCTACTTGCGGGTGTTAGTCACTCGACGTGTGTAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTAGCAGACTATGTTTTAAGAACCTTAAGGGAAAATCCGAAAGGGAAATCCCAAAAAGGACAATATCTATTAGCGGTGGACTTGGGTTGTTACAAGACCTGACCTTTTTGTAATTATGAGTTTGCTCTTGTTCGTTTGAACCGAAATCCTTATCGTGGTTAGAGTCAAACTCCTTTCATTGGGGCTTGTTTTTTTCGTATGTTCTTGTATATTCTTTCAATTCCCTTTGCTGGAATTTAGCGTGAATCCTCGTCTAGATCTTCGTATATTCTTTCATTATATAAAATCCGATTCCGAGATCGACAAACCCCTCAATCCCATGATAGAGAGATACTAATCTTCCAAGTTTGGTCTTGATATTCAACAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTACCTAAACAGGCAAGAACATTTTGACACACTTATCTAGTTATCTCTTCACTGCTAAGCATGAATGTCACACAATCTTAATACCCAAAGAGTGCAACGCGCAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCAACAACGCCCGATCATACATAACATTGATCAAATTCACGTCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAATGAATTTAAATTCTCATGATTGTTCAAGCCATTGATTTAAACCTCGAGATAGAAAATTTTGAATTACATGTTTGGTCCCCGAACTTATTAGAAATTGAAAGAAAG

mRNA sequence

TTGTAGCCTAGTATTTGCTATTAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGTGTTCGTGTTCGTGTTCATAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCACCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGTAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTACCTAAACAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCAACAACGCCCGATCATACATAACATTGATCAAATTCACGTCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAATGAATTTAAATTCTCATGATTGTTCAAGCCATTGATTTAAACCTCGAGATAGAAAATTTTGAATTACATGTTTGGTCCCCGAACTTATTAGAAATTGAAAGAAAG

Coding sequence (CDS)

ATGGATGAATCAGACGGAGGTCAAAATCCACCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGTAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTACCTAAACAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAGTTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGA

Protein sequence

MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYRRRPK
Homology
[Close]
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match: A0A6J1FU95 (uncharacterized protein LOC111448192 OS=Cucurbita moschata OX=3662 GN=LOC111448192 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 9.9e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match: A0A6J1JH16 (uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.3e-107
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARN+NKVCIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNMNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match: A0A0A0LIW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 9.6e-96
Identity = 174/195 (89.23%), Postives = 183/195 (93.85%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDG QN  PNLTSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           E+SQAH+H+KTEDSPAFPQPR+YKPSY AGDEYLNRF RNA LVASGVARNVN+VC Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 196
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match: A0A1S3CEZ6 (uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.3e-94
Identity = 172/195 (88.21%), Postives = 180/195 (92.31%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDES G QN  PN TSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           E+SQAH+H+KTEDSPAFPQPRNYKPSY AGDEYLNRF RNA LVASGVARNVN+VC Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 196
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match: A0A6J1CWC7 (uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015399 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.5e-93
Identity = 174/200 (87.00%), Postives = 184/200 (92.00%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSN---GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVP 60
           MDES+G QN  PNL+SN   GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVP
Sbjct: 1   MDESEGLQNQTPNLSSNGDGGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVP 60

Query: 61  NYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDK 120
           NY+VGETELEASKEGR+L DFKYACVGYSV+LEKKDS +DV NKQAELPFCVGLEVLLDK
Sbjct: 61  NYVVGETELEASKEGRNLTDFKYACVGYSVYLEKKDSSDDVPNKQAELPFCVGLEVLLDK 120

Query: 121 RPAEHSQA--HVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKV 180
           RPAEHS A  H+HDKTEDSPAFPQPRNYKPSY+AGDEYLNRF RNA LVASGVARNVN+V
Sbjct: 121 RPAEHSHAHTHIHDKTEDSPAFPQPRNYKPSYSAGDEYLNRFKRNATLVASGVARNVNRV 180

Query: 181 CIYIKESFDDILHPYRRRPK 196
           C YIKESFDDIL+PYRRRPK
Sbjct: 181 CNYIKESFDDILYPYRRRPK 200

[Close]
BLAST of CmoCh20G008180 vs. NCBI nr
Match: XP_022943424.1 (uncharacterized protein LOC111448192 [Cucurbita moschata] >KAG6571077.1 hypothetical protein SDJN03_29992, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.5 bits (1033), Expect = 2.0e-108
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. NCBI nr
Match: XP_023512006.1 (uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.1 bits (1019), Expect = 8.6e-107
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. NCBI nr
Match: XP_022986613.1 (uncharacterized protein LOC111484301 [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 1.9e-106
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARN+NKVCIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNMNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. NCBI nr
Match: KAG7010891.1 (hypothetical protein SDJN02_27689 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.4 bits (986), Expect = 5.8e-103
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARNVNK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 191

[Close]
BLAST of CmoCh20G008180 vs. NCBI nr
Match: XP_038900455.1 (uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 9.5e-98
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0 

Query: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDG QN  PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180
           EHSQAHVH+KTEDSPAFPQPR YKPSY AGDEYLNRF RNA LVASGVARNVN++C Y+K
Sbjct: 121 EHSQAHVHNKTEDSPAFPQPRTYKPSYPAGDEYLNRFKRNAALVASGVARNVNRICNYVK 180

Query: 181 ESFDDILHPYRRRPK 196
           ESFDDIL+PYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 195

[Close]
BLAST of CmoCh20G008180 vs. TAIR 10
Match: AT3G51100.1 (unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46
Identity = 94/184 (51.09%), Postives = 124/184 (67.39%), Query Frame = 0 

Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYR 196
           PQ +N KP+ A        + +L RFTRNA LVA+GV +N+ +V  Y+KE+ DD L PYR
Sbjct: 148 PQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRVGNYVKETVDDSLDPYR 207

[Close]
BLAST of CmoCh20G008180 vs. TAIR 10
Match: AT3G51100.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 158.3 bits (399), Expect = 6.3e-39
Identity = 88/184 (47.83%), Postives = 114/184 (61.96%), Query Frame = 0 

Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL Q           EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQA----------EASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYAAG------DEYLNRFTRNAVLVASGVARNVNKVCIYIKESFDDILHPYR 196
           PQ +N KP+ A        + +L RFTRNA LVA+GV +N+ +V  Y+KE+ DD L PYR
Sbjct: 148 PQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRVGNYVKETVDDSLDPYR 201

[Close]
BLAST of CmoCh20G008180 vs. TAIR 10
Match: AT3G51100.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 7.4e-32
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 0 

Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYA 149
           PQ +N KP+ A
Sbjct: 148 PQHQNNKPASA 158

The following BLAST results are available for this feature:
BLAST of CmoCh20G008180 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G008180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FU959.9e-109100.00uncharacterized protein LOC111448192 OS=Cucurbita moschata OX=3662 GN=LOC1114481... [more]
A0A6J1JH169.3e-10798.46uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301... [more]
A0A0A0LIW69.6e-9689.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1[more]
A0A1S3CEZ65.3e-9488.21uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=... [more]
A0A6J1CWC74.5e-9387.00uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
BLAST of CmoCh20G008180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943424.12.0e-108100.00uncharacterized protein LOC111448192 [Cucurbita moschata] >KAG6571077.1 hypothet... [more]
XP_023512006.18.6e-10798.97uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo][more]
XP_022986613.11.9e-10698.46uncharacterized protein LOC111484301 [Cucurbita maxima][more]
KAG7010891.15.8e-10396.92hypothetical protein SDJN02_27689 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038900455.19.5e-9891.28uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida][more]
BLAST of CmoCh20G008180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G51100.16.9e-4651.09unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bac... [more]
AT3G51100.36.3e-3947.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G51100.27.4e-3251.91unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..142
NoneNo IPR availablePANTHERPTHR34566ALTERED INHERITANCE OF MITOCHONDRIA PROTEINcoord: 10..195
NoneNo IPR availablePANTHERPTHR34566:SF2ALTERED INHERITANCE OF MITOCHONDRIA PROTEINcoord: 10..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G008180.1CmoCh20G008180.1mRNA