CmoCh20G007770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G007770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR24-like
Location	Cmo_Chr20: 3905373 .. 3905666 (-)
RNA-Seq Expression	CmoCh20G007770
Synteny	CmoCh20G007770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGCCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAAATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTATCTAAATCATCCGTCGTTCCAGCAACTTCTCAGCCACGCAGAGGAGAAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCACGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGCCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAAATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTATCTAAATCATCCGTCGTTCCAGCAACTTCTCAGCCACGCAGAGGAGAAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCACGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGCCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAAATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTATCTAAATCATCCGTCGTTCCAGCAACTTCTCAGCCACGCAGAGGAGAAGTTTGGCTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCACGTATCTTGA

Protein sequence

MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS

Homology

[Close]

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLH 96
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.8e-23
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 12 AKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGF 71
          AK+IL    G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-22
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSR 94
          +TSR
Sbjct: 85 VTSR 88

[Close]

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-22
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E++FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.5e-22
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRL 95
          +TSRL
Sbjct: 83 VTSRL 87

[Close]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.8e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL
Match: A0A6J1FU83 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448831 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQ GFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLHVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHVS 97

[Close]

BLAST of CmoCh20G007770 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata])

HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of CmoCh20G007770 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LL+HAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLNHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. NCBI nr
Match: KAG6571056.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          LLSHAEEKFGFHH QGGLTIPCKEDAFIDLTSRL VS
Sbjct: 61 LLSHAEEKFGFHHAQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007770 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQ 60
          M IR   ++  +KQ+LK     + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 98
          +LL  AEE+FGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh20G007770 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26
Identity = 56/99 (56.57%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILK----MQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR   ++  +KQIL+    +    + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLH 96
          SFQ LL  AEE+FGF HP GGLTIPC E+ FIDL SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmoCh20G007770 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 1   MGIRFLSLVPHAKQILKMQPGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPIS 60
           MG+   ++    KQILK+     +N+        VPKGHVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-TSRL 95
           +LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+DL  SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CmoCh20G007770 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLH 96
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of CmoCh20G007770 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.8 bits (268), Expect = 4.8e-24
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 12 AKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGF 71
          AK+IL    G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

The following BLAST results are available for this feature:

BLAST of CmoCh20G007770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF6	1.8e-23	72.73	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FK62	6.8e-23	62.65	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	3.4e-22	73.44	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	4.4e-22	70.77	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF9	7.5e-22	70.77	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of CmoCh20G007770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FU85	8.8e-50	100.00	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1JHE3	6.3e-48	97.94	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	6.3e-48	97.94	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FU83	1.4e-47	96.91	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1G6U1	1.6e-46	93.81	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]

BLAST of CmoCh20G007770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944371.1	1.8e-49	100.00	auxin-responsive protein SAUR23-like [Cucurbita moschata]	[more]
XP_022944365.1	1.3e-47	97.94	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	2.9e-47	96.91	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]
XP_023512611.1	2.9e-47	96.91	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571056.1	1.1e-46	96.91	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh20G007770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	1.0e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.8e-26	56.57	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	6.7e-26	55.77	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.3e-24	72.73	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.8e-24	62.65	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 23..93 e-value: 8.1E-26 score: 90.0
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007770.1	CmoCh20G007770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin