CmoCh20G007320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGATACCCCCTCGCCGCCTACCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCACCGGCGAACGTAGCTTTATGCGCAGGCTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGATACCCCCTCGCCGCCTACCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCACCGGCGAACGTAGCTTTATGCGCAGGCTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGATACCCCCTCGCCGCCTACCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCACCGGCGAACGTAGCTTTATGCGCAGGCTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPTSAAYPLQCPAWDELPIKNPLVKHAALAYLQPMLTPPATGERSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW Homology
BLAST of CmoCh20G007320 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34 Identity = 83/111 (74.77%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of CmoCh20G007320 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18 Identity = 60/116 (51.72%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of CmoCh20G007320 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.8e-18 Identity = 62/128 (48.44%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh20G007320 vs. ExPASy TrEMBL
Match: M5VHF3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032mg PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.8e-18 Identity = 62/128 (48.44%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh20G007320 vs. ExPASy TrEMBL
Match: A0A5E4EIX6 (PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.0e-18 Identity = 62/128 (48.44%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh20G007320 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240.7 bits (613), Expect = 6.3e-60 Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0
BLAST of CmoCh20G007320 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba]) HSP 1 Score: 102.8 bits (255), Expect = 2.1e-18 Identity = 60/116 (51.72%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of CmoCh20G007320 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica]) HSP 1 Score: 100.9 bits (250), Expect = 7.8e-18 Identity = 62/128 (48.44%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh20G007320 vs. NCBI nr
Match: XP_034228819.1 (uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_1g112960 [Prunus dulcis]) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17 Identity = 62/128 (48.44%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh20G007320 vs. NCBI nr
Match: KAB2636267.1 (hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17 Identity = 63/127 (49.61%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of CmoCh20G007320 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05 Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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