CmoCh20G005620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G005620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr20: 2705896 .. 2707102 (+)
RNA-Seq Expression	CmoCh20G005620
Synteny	CmoCh20G005620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTGTCACAGGGGCGTATTGTGCAAACACACGACCATCGTACTTGTATCGCAATGGAGACAGATTTCCGAACCGATACCTTACGTAATGTTTGTTACAAAATTATTGTGGAAGTTGTAACTATAAAACTCAAACATGTATTCAAATCTCTCCCTATCCTTTTCTCATTTATGTAATGTTTATCATTCGGCAACGAAAGAAAGACCGTTTGAAGTAGTATATGGGCGTCCGACATTATGCATTCCCAACTATGAGTGCCACCACATAACATCACAACATAGTAGGCATCCAAAAGAAACCTGTAAATTTGTAAAATATTCATCGATAATGATATTTATACCGACAAATTCGTAAATTTGAAATTCTGTTATCTATATGGACCTCAATATTTTATTCCTTCATTTCTATGTCAAGTGAAATGCTGGTTTCTCCATAAGAGGGAAAAAAAAGAAAGAAAAAAAAAAAGAATTAACGTGGTCTTCTTCTACTTTAAAATGAACTAACACATTCAACTTACAGGGCACATTAGCAACATTCAAGATAAATCACTTCTTGGTGTAAGTTTGATGGTCGGGTCCGACATCCCGGGAACCAGTGTTTATATAAGGACCTCGAAAAGTGGCCTGCGGGGGAAGTGGCTTTGCCGGATCTATAACTGGCTTTTTGGAAGACCTGGATGATCAATCCTATTCACATTAACTCGTGCAAATTCATTTGTTCAAATGCATAAAATTGTCGGTACCAGCCATGAGTTCATGTACTTACGCCATGTAAAAGGGAAAGGCTAATCCAGCAGATGCAAAGGCTATCAACCCAGTGGCAACGATAATATTCCGTCGTGTCATCGGGTTTTCTACAAGTGATCTGAATACAAACACCTATAAAATGAGTGAAAATTATACCAAAAAGAAATCCAATATGGTAAAATTTCAAGTAATTCTAATAGGAATATGTGTCTGCCGTTTGGAAGTAAGCAGGGCAGAAACTAGTTGGCAAATATGACAGATTGCTCCCTTTTTTTTAGTTTTAGTATAAATGACGGATCTTTTGGTTCTAAAAAGTGCAACAAGAAGGCTTCATGTGCACATCATCAGCCAAAAGGAAAGGGAGAGAACAAAACACAAGAACCAAAACAGCAAGGAAAAGAAGAGGAACCTTTTAGAGCCAGAACTGTGAGGCCGACAGCAATTGATATTCTGTAA

mRNA sequence

ATGGATATTGTCACAGGGGCGTATTGTGCAAACACACGACCATCGTACTTGTATCGCAATGGAGACAGATTTCCGAACCGATACCTTACTATAAATGACGGATCTTTTGGTTCTAAAAAGTGCAACAAGAAGGCTTCATGTGCACATCATCAGCCAAAAGGAAAGGGAGAGAACAAAACACAAGAACCAAAACAGCAAGGAAAAGAAGAGGAACCTTTTAGAGCCAGAACTGTGAGGCCGACAGCAATTGATATTCTGTAA

Coding sequence (CDS)

ATGGATATTGTCACAGGGGCGTATTGTGCAAACACACGACCATCGTACTTGTATCGCAATGGAGACAGATTTCCGAACCGATACCTTACTATAAATGACGGATCTTTTGGTTCTAAAAAGTGCAACAAGAAGGCTTCATGTGCACATCATCAGCCAAAAGGAAAGGGAGAGAACAAAACACAAGAACCAAAACAGCAAGGAAAAGAAGAGGAACCTTTTAGAGCCAGAACTGTGAGGCCGACAGCAATTGATATTCTGTAA

Protein sequence

MDIVTGAYCANTRPSYLYRNGDRFPNRYLTINDGSFGSKKCNKKASCAHHQPKGKGENKTQEPKQQGKEEEPFRARTVRPTAIDIL

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh20G005620 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G005620 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G005620 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G005620 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G005620.1	CmoCh20G005620.1	mRNA