CmoCh20G005420 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G005420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR50
Location	Cmo_Chr20: 2637341 .. 2637694 (+)
RNA-Seq Expression	CmoCh20G005420
Synteny	CmoCh20G005420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAGGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG

mRNA sequence

ATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAGGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG

Coding sequence (CDS)

ATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAGGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG

Protein sequence

MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE

Homology

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BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 24  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFL 83
           L+R  SLG+++  G     YD   +P DV +GHF V     E   R+ VP+S LT+P F 
Sbjct: 20  LKRCSSLGKKNGGG-----YDEDCLPLDVPKGHFPVYV--GENRSRYIVPISFLTHPEFQ 79

Query: 84  RLLEAAAEEYGFDHEGAVTVPC 106
            LL+ A EE+GFDH+  +T+PC
Sbjct: 80  SLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 44  DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTV 103
           D + +P DV +GHF V     E   R+ VP+SCL +PTF  LL+ + EE+GF+H+  + +
Sbjct: 31  DDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIII 90

Query: 104 PCR 107
           PC+
Sbjct: 91  PCQ 91

[Close]

BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-08
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 50  EDVKEGHFAV-VAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS 109
           +DV +G  A+ V    EE +RF VP+    +P F++LL+ A +EYGFD +G +T+PC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 110 ELEQILA 116
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.3e-07
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 51  DVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHE-GAVTVPCRPSE 110
           DV +G+ AV   D  + +RF +P+S L  P+F  LL  A EE+G+DH  G +T+PC+  E
Sbjct: 25  DVPKGYAAVYVGD--KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 111 LEQILA 116
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 48  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC 106
           +P+DV +GHF V         R+ VP+S L +  F  LL  A EE+GFDH+  +T+PC
Sbjct: 44  LPQDVPKGHFPVYV--GPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPC 99

[Close]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL
Match: A0A6J1JAG6 (auxin-responsive protein SAUR50 OS=Cucurbita maxima OX=3661 GN=LOC111484020 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 60
           MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQD+FDYDSTPVPEDVKEGHFAVV
Sbjct: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDEFDYDSTPVPEDVKEGHFAVV 60

Query: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF+HEGAVTVPCRPSELE ILAEE
Sbjct: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFNHEGAVTVPCRPSELEHILAEE 117

[Close]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL
Match: A0A6J1FVW1 (auxin-responsive protein SAUR50 OS=Cucurbita moschata OX=3662 GN=LOC111448954 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 9   MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK 68
           MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK
Sbjct: 1   MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK 60

Query: 69  RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE
Sbjct: 61  RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 109

[Close]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY------DSTPVPEDVKE 60
           M K VT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ DY       STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL 118
           GHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYGFDHEGA+TVPCRPSELE+IL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

[Close]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKE 60
           M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ D +      ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL 118
           GHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYGF+HEGA+TVPCRPSELE+IL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

[Close]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKE 60
           M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ D +      ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL 118
           GHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYGF+HEGA+TVPCRPSELE+IL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

[Close]

BLAST of CmoCh20G005420 vs. NCBI nr
Match: KAG6570808.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 60
           MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV
Sbjct: 31  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 90

Query: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE
Sbjct: 91  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 147

[Close]

BLAST of CmoCh20G005420 vs. NCBI nr
Match: XP_023512258.1 (auxin-responsive protein SAUR50 [Cucurbita pepo subsp. pepo] >KAG7010648.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 60
           MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV
Sbjct: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 60

Query: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE
Sbjct: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 117

[Close]

BLAST of CmoCh20G005420 vs. NCBI nr
Match: XP_022986206.1 (auxin-responsive protein SAUR50 [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVV 60
           MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQD+FDYDSTPVPEDVKEGHFAVV
Sbjct: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDEFDYDSTPVPEDVKEGHFAVV 60

Query: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF+HEGAVTVPCRPSELE ILAEE
Sbjct: 61  AVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFNHEGAVTVPCRPSELEHILAEE 117

[Close]

BLAST of CmoCh20G005420 vs. NCBI nr
Match: XP_022944522.1 (auxin-responsive protein SAUR50 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 9   MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK 68
           MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK
Sbjct: 1   MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPK 60

Query: 69  RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE
Sbjct: 61  RFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 109

[Close]

BLAST of CmoCh20G005420 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY-----DSTPVPEDVKEG 60
           M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ DY     +STPVPEDVKEG
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDESTPVPEDVKEG 60

Query: 61  HFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILA 118
           HFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYGFDHEGA+TVPCRPSELE+ILA
Sbjct: 61  HFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA 120

[Close]

BLAST of CmoCh20G005420 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 10  KKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDA--EEP 69
           K  GIVKLK+ V +L +            +++  D   VP+DVKEGHFAV+AVD   E  
Sbjct: 15  KMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDC--VPKDVKEGHFAVIAVDGYHEPT 74

Query: 70  KRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE 118
           +RF VPL  L +P F +LLE A EEYGF H+GA+ VPCRPS L  IL E+
Sbjct: 75  QRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQ 122

[Close]

BLAST of CmoCh20G005420 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-16
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 48  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRP 107
           +P DVKEGH AV+AV  E  KRF + L  L  P FLRLLE A EE+GF   G +T+PC+P
Sbjct: 41  IPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQP 100

Query: 108 SELEQIL 115
            E+++IL
Sbjct: 101 EEVQKIL 107

[Close]

BLAST of CmoCh20G005420 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 24  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFL 83
           L+R  SLG+++  G     YD   +P DV +GHF V     E   R+ VP+S LT+P F 
Sbjct: 20  LKRCSSLGKKNGGG-----YDEDCLPLDVPKGHFPVYV--GENRSRYIVPISFLTHPEFQ 79

Query: 84  RLLEAAAEEYGFDHEGAVTVPC 106
            LL+ A EE+GFDH+  +T+PC
Sbjct: 80  SLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CmoCh20G005420 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-11
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 24  LQRSLSLGRRSDSGQDD-FDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTF 83
           L+R  SLG++  S  +D  ++D   +P DV +GHF V         R+ +P+S LT P F
Sbjct: 19  LKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYV--GGNRVRYVLPISFLTRPEF 78

Query: 84  LRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL 115
             LL+ A EE+GFDH   +T+PC     + ++
Sbjct: 79  QLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLI 108

[Close]

BLAST of CmoCh20G005420 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 24  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFL 83
           L+R  SLG+++  G     Y+   +P DV +GHF V         R+ VP+S LTN  F 
Sbjct: 20  LKRCSSLGKKNGGG----GYEEVDLPLDVPKGHFPVYV--GHNRSRYIVPISFLTNLDFQ 79

Query: 84  RLLEAAAEEYGFDHEGAVTVPC 106
            LL  A EE+GFDH+  +T+PC
Sbjct: 80  CLLRRAEEEFGFDHDMGLTIPC 95

The following BLAST results are available for this feature:

BLAST of CmoCh20G005420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	2.5e-11	43.90	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	1.4e-09	42.86	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	2.6e-08	40.30	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
P33079	6.3e-07	40.91	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SL45	1.4e-06	43.10	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]

BLAST of CmoCh20G005420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAG6	1.0e-55	97.44	auxin-responsive protein SAUR50 OS=Cucurbita maxima OX=3661 GN=LOC111484020 PE=3...	[more]
A0A6J1FVW1	1.6e-53	100.00	auxin-responsive protein SAUR50 OS=Cucurbita moschata OX=3662 GN=LOC111448954 PE...	[more]
A0A0A0KGI2	1.8e-49	86.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A5D3DFC2	1.0e-47	84.55	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	1.0e-47	84.55	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]

BLAST of CmoCh20G005420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570808.1	4.9e-57	100.00	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023512258.1	4.9e-57	100.00	auxin-responsive protein SAUR50 [Cucurbita pepo subsp. pepo] >KAG7010648.1 Auxin...	[more]
XP_022986206.1	2.1e-55	97.44	auxin-responsive protein SAUR50 [Cucurbita maxima]	[more]
XP_022944522.1	3.3e-53	100.00	auxin-responsive protein SAUR50 [Cucurbita moschata]	[more]
XP_038902788.1	2.6e-50	87.70	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of CmoCh20G005420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	3.5e-21	50.00	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	3.4e-16	55.22	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	1.8e-12	43.90	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	2.5e-11	36.96	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	1.3e-10	41.46	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 36..114 e-value: 5.2E-19 score: 68.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..47
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..116
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G005420.1	CmoCh20G005420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin