CmoCh20G004940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DNA repair protein RAD51 homolog 2
Location	Cmo_Chr20: 2336676 .. 2342386 (-)
RNA-Seq Expression	CmoCh20G004940
Synteny	CmoCh20G004940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTCCTTCTGTTTTGGCGCCATTTCAACTGCTTACCAGGCGTCGGATCAACCATTCTAGGGTTTCGCCTTTGGCGGGAAAGCAAAGAACGGAGCCAGATAGCATGATTTGACGTAGAGATTCAAGGCGATAGAATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGTAATGATGGAACTTTGGAATTTCGTGATTCCTCACCATTAATTTGTCGATTTGTTCTTCCAGTTCGTGTTTAATACGCCGTAGGAACCGAAGTGGAGCCTTTACATCATGTAGTTCAGATGACCACTCATTGGAAGTCCTTTGTATGGAAATTGAACCACTGCAATGGTTCTTAATTTAGAGTCAGTTCATAATGTCACGCACTGAATGATCTCTCTCTCTTTTGAGCTATTTTTTCAGGCTCCGTCATTATTTTTTGCCCTGTAGCCTATTTGAGCCTATAGAAAATGTTTTTTCTGCAGTATCAGTATATTTAATTTGTTTCAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTATCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATCGCTTCTCCTCCTTATCAGACCGTAAGCATTCAGTTGATTCTGTTTAATTGGTTGATTTTAGAAGTGATGTTCTTGTGGCGCCTGCAGGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATTCCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCTGGAATTGGCAAGACGCAAGTGTGATTCTTTCCTACTTTTCCGGTTTGATAATAATCTAAAATTTATATCTGAAAATTTTTACTGATTGGTGTATCAATTGAGAATCTATGATTGCGTTTAAGGGGAAGCATTTTTTACTAATTTTGAGTCGCTACTTCTGCTGGTTGATGAATTTCAGTTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTGCCACCGAGCTACGGAGGTTTAGCTGGCCGTGTGATATATATTGATGTGGAATCTAAGTTTAGTTCCAGAAGGTATTTTAAGTACCCCATGCTACTCATTATTTCTATATTTGTGTAATGGGTTGTGAGATCCCACATCGATTGGAGAGGAGAACGAAACATTCATTATAAAGCTGTGAAAACTTCTCCCTAGCAGACGCGTATTAAAACCGTGAGGCTGATGGCGATACATAATCGGCCAAGGCGGACAATATCTCCTAGCGGTGGACTTGGGTTGTTACAAATGGTATCAAAGCCAGACACCGGGCAGTGTGCCAGCAAAGATGCTGGAACCCCAAGGGGGGTGGATTGTGAGATCTCATGTCGGTTGGAGAGGGGAACGAAGTATTCCTTATAAAAGTGTGGAAACCTCTCTCTAGCAGACGCGTATTAAAACCGTGAGGTTGACAGTGATACGCAACGGGTCAAGGCAGACAATATCTGCTAGCAGTAGACTTGGGCTGTTACATGGATACATCACTCTTGTGCTTTTTCTCCCTGTTTTTCTCTCCAGGATGATTGAAATTGGCATGAGAAGCTTTCCTGATGTATTTCAGAAGAAAGACATGGCAAAAGAGGTAGTAAAATAATAAATATTCTCTTCTTTTAAAATTTTAATTTATAGTACATAAGATGGATCGTGCTCAATTTACATTCCAGATGGCTGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGGTTTGGATCAAAGTCAAAGACATGTTATTTGGCCTAGCTATGTCATTGATAGATTAGGGAAAAAAAATGCTCACCTCATTTGTGACGACATTTTCAATATCTGCCATGATAAGACGAGTTTCTGCTGTCTGTTTCCTTTCCAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGTAACTCACCTTTTTTGTTTTCCTTATCTCATGATGTACTCTACCTTCTGTTCAAATGAGGCTTCTATGCCTAGCTTCAGTTGGGGTCTCATTGATATGTCTTTACGTAGCTTCAGTTTTTCTGTTTATTCAGTTTTCCAGAGTTCATCAAGAGTCCTATAATTATGCGTAACTCTTTTAAAATTTTAGCGAAATACTATTTTTTAGAAAATGTTCTTGAAAAATGAGTAAACTAGCTTTGATCTGTTGTGCTATAATATATTTTTGAAGAGAACTCTTCATGTTATTTGAAATGAAACCACATTGGGTTAAGAATGGTTGTTCATAGTGTGCATTTCTGTCGATTTCTTTCTGATGCTTCAAGAAAATGGTTCTTTTTCCAGAGAATATGAGCAAGGGGCACCCAAACAGCATTCATTGGGTTGGCATATTTCATTTATCAAGTGAGATTTACTTTCGCTTTACTTACTCCAGTTGGGTTTTGTTGTGTTTGGTAACTGTTCCATTTATCTTCTGAGTGTTGTCATTTGATTTCCCACCATCTCAGGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGTAGGGTGATATTGCTATTCTGAAAATTTATAAAATTTGTTTACGATATAGCTTCTCTGTTGCAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTTGGTACACTTTTACTGATTGTTGCCTTTTAGCTGACATAATGGACAAAATTACACTTGTTGTGAGATCCCACGTCGGTGGGCTCAGGCTGTTACACTTGTAATGCCGGTAGAGTTGATGGATCATCATCTTACCGATATTTTCTCGACTTGTTTCACTCTTAAACGAAAAGGGGGCAGTCAAAATTTAGAGTTGCTTCTAACAAATGTTTCATAACTCATCATTTCCGTCCTTCTCCTATAGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAACGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGTTAATAGTACCAACATAAACAACGCCTTCTCTTCATTTTCCTATTCTATCGGTCAACGGTCTGGTTGACTTAAGTTAGAAGCTCGATTACACTTAAAACATTTATGACATGTTTCCTCCTTGTTGGTAATCTTCTGTCAAATTATCAAAACGTTCTAAACTGATCTTACAAATTCGGTATCATTGCATGTTAATTGAGTTACCTCCTAACCTCATTGTCTGAAAATTATCCACCAAGGATGCTACGAGAAGTTGATGCTTTTAGTTGTATTTTATTCCACTATTCAGTCCAACACAGAGTTTCTTTTTTGCTTTTATATCTTTTAGTCATTTGATTTTACGACATTAATGCAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGACCATTGCCACTGACATGCGAATACAATTGCTAAAAACTCAGTCTTCTCATACGTATACGAGACTTATGCTGACTCGATGGTTTCCTGTTGTGAGTGGTTGGTTATTATGGAAATAGTTGATTAATTCCCAATTATTATTTTCATTGTAGTTTCTTATGCAATTTTAACATTTGACATTGATTTCTTGAGAATCCATGATTTATTCTACCATTTTCTTTTCATTCTGGCTACGTTTACAGGATAGCTTAGAACTAACCAGCAGAACATGGAAGATGGAAAGATATCAAGGCTGCGGATGACTCTTGTTGGGAGGAATTGCATGCCTTAATTTCTTTAGTGATAAAAAAGTGTGGAAAGTACAGATAGGACTTTAGTTTCTTAGTGATAAAAATGTTTAGAAAGTACAGATAGATCGTCATTTTGATACATTTAAATGTTAGAACAAGGTTGACTTGAATTTGGACGTCCTTCAATGAGCTCCTAATTGGTACAATGGTATGTCGTGGCATTTACGTATATCCATTGAAGCTCTATGAATTGTTGCCTCGAAATTTTTTAATGCTGCACTTTCTTCTGATTATTATCTTGATGGTGAAGGTCCCAACACGGTGGTTATTCTTTTAGGCCCCTGAAGGTGGTGACTATCCATTTAGAGGATGAATCTTGCATTCTCTATCAAAAGTTCTGTTAATGCATCAAATCAATGTGGTAGACTAATGTTTCAAAGATTGCAAAACACCAAATTCTGGATCTCTTGGAACAACGGTATATCAAAACCATGGAATTTGTGTTATGTTCTGAACAGGTACGGAGTAATGCATTTTATGATCACAATTGTGTTTCATCATTCCAAACTTTCAAGTACAGCGAGCTCGGGAAGGAAAAAAAGGAGTTAACCCGAAGGTTCGTATTCGACGTTACATCCTGTCGCGAGACTTGGTCTGCTCGAGTAAAAATGGAAACTTGAAGTTGATTTATGTTTTATATTTCAGGGTTTTCTGTCAAGGAAGATTGGTTGCTGTAAGATGGAGAGAATTCTCCTGAACCTGTTTATGGGCATTTTTGCTAGTGGTTAGCTGAAACAAGGCAATCTCAATACTGGCCAATTAAGGAAGGTGGTTTGCTCAAACACTTCTCATTTTAAAAAATTGCTGACATGTTTGCTCATAAATTATGCTCTTTCTAGTAGATTCCCCATTCTCATTAGTTTATTTGATTGTGGGTGATTTAACTACTCCTAGTCACTTTGTATATTATATCTGAAAACATAATCGAGATCCACCAATTATCTTTAACTTTGAAAAATGAAGGATTAAAGAATGCAGCAACTTATCGAATCCTTAGACAAAGGAAATCTGTGAGATCCCATATCGATTGGAGAGAGTAACGAGTGCCAGTGAGGACATTGGGCCTCGAAGGTGGGCAGATTGTGAGATCCCACATCGATTGGAGAGGGGAACAAGTGCCAGTGAGGACGCTGGATCTTGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAAGAAAACGAAGCATTCTTTATATAGATGTGAAAATCTCCCCCTAGTAGACGCATTTTAAAAACTTTAAAGAAAAATTCGAAAAGAAAAGCTCAAAGAGGACAATATTTGATAGCGGTAAGGAGCAAACTAAAGAACAGAAACAAACAAACAAAGAAAAGAAAAGCGGTTAAAACATAGAACTTTGGATGAAACCAACCAGTTAGAAACAGCTTCAAAATTGGTCCTTTACAATGCAAATAAAATCCTGTTGGTTGTGGAAAGTTAAGTTATTATTGACTGTCTCTTTGCTTTGGACATAATCTTGAAAGAAAAAAGAAGAAGAAAATATGCTTTATATGATAGGATTCATGTTGGTTGGTGTGACAAACTGACAGTGCCATCAAAGCACGAGCCTTTTAGATAAACTCAAAACCTTCAAATGGAAGAATGAATGACACACATATTAATCAAAGCCCTACCTGCTGTTTACCTGTTACATTGCTTTTAAAACACTATTCACTTAGGGGGCCAGAAGAAAACACCCAAG

mRNA sequence

TGTTTCCTTCTGTTTTGGCGCCATTTCAACTGCTTACCAGGCGTCGGATCAACCATTCTAGGGTTTCGCCTTTGGCGGGAAAGCAAAGAACGGAGCCAGATAGCATGATTTGACGTAGAGATTCAAGGCGATAGAATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTATCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATCGCTTCTCCTCCTTATCAGACCGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATTCCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCTGGAATTGGCAAGACGCAATTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTGCCACCGAGCTACGGAGGTTTAGCTGGCCGTGTGATATATATTGATGTGGAATCTAAGTTTAGTTCCAGAAGGATGATTGAAATTGGCATGAGAAGCTTTCCTGATGTATTTCAGAAGAAAGACATGGCAAAAGAGATGGCTGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGAGAATATGAGCAAGGGGCACCCAAACAGCATTCATTGGGTTGGCATATTTCATTTATCAAGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAACGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGACCATTGCCACTGACATGCGAATACAATTGCTAAAAACTCAGTCTTCTCATACGTATACGAGACTTATGCTGACTCGATGGTTTCCTGTTGATAGCTTAGAACTAACCAGCAGAACATGGAAGATGGAAAGATATCAAGGCTGCGGATGACTCTTGTTGGGAGGAATTGCATGCCTTAATTTCTTTAGTGATAAAAAAGTGTGGAAAGTACAGATAGGACTTTAGTTTCTTAGTGATAAAAATGTTTAGAAAGTACAGATAGATCGTCATTTTGATACATTTAAATGTTAGAACAAGGTTGACTTGAATTTGGACGTCCTTCAATGAGCTCCTAATTGGTACAATGGTATGTCGTGGCATTTACGTATATCCATTGAAGCTCTATGAATTGTTGCCTCGAAATTTTTTAATGCTGCACTTTCTTCTGATTATTATCTTGATGGTGAAGGTCCCAACACGGTGGTTATTCTTTTAGGCCCCTGAAGGTGGTGACTATCCATTTAGAGGATGAATCTTGCATTCTCTATCAAAAGTTCTGTTAATGCATCAAATCAATGTGGTACGGAGTAATGCATTTTATGATCACAATTGTGTTTCATCATTCCAAACTTTCAAGTACAGCGAGCTCGGGAAGGAAAAAAAGGAGTTAACCCGAAGGGTTTTCTGTCAAGGAAGATTGGTTGCTGTAAGATGGAGAGAATTCTCCTGAACCTGTTTATGGGCATTTTTGCTAGTGGTTAGCTGAAACAAGGCAATCTCAATACTGGCCAATTAAGGAAGGTGGTTTGCTCAAACACTTCTCATTTTAAAAAATTGCTGACATGTTTGCTCATAAATTATGCTCTTTCTAGTAGATTCCCCATTCTCATTAGTTTATTTGATTGTGGGTGATTTAACTACTCCTAGTCACTTTGTATATTATATCTGAAAACATAATCGAGATCCACCAATTATCTTTAACTTTGAAAAATGAAGGATTAAAGAATGCAGCAACTTATCGAATCCTTAGACAAAGGAAATCTGTGAGATCCCATATCGATTGGAGAGAGTAACGAGTGCCAGTGAGGACATTGGGCCTCGAAGGTGGGCAGATTGTGAGATCCCACATCGATTGGAGAGGGGAACAAGTGCCAGTGAGGACGCTGGATCTTGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAAGAAAACGAAGCATTCTTTATATAGATGTGAAAATCTCCCCCTAGTAGACGCATTTTAAAAACTTTAAAGAAAAATTCGAAAAGAAAAGCTCAAAGAGGACAATATTTGATAGCGGTAAGGAGCAAACTAAAGAACAGAAACAAACAAACAAAGAAAAGAAAAGCGGTTAAAACATAGAACTTTGGATGAAACCAACCAGTTAGAAACAGCTTCAAAATTGGTCCTTTACAATGCAAATAAAATCCTGTTGGTTGTGGAAAGTTAAGTTATTATTGACTGTCTCTTTGCTTTGGACATAATCTTGAAAGAAAAAAGAAGAAGAAAATATGCTTTATATGATAGGATTCATGTTGGTTGGTGTGACAAACTGACAGTGCCATCAAAGCACGAGCCTTTTAGATAAACTCAAAACCTTCAAATGGAAGAATGAATGACACACATATTAATCAAAGCCCTACCTGCTGTTTACCTGTTACATTGCTTTTAAAACACTATTCACTTAGGGGGCCAGAAGAAAACACCCAAG

Coding sequence (CDS)

ATGGCGAACAAATTAATTAATCAGATGGGATTACCCAGATCGATAGCTAACATTTTCGCAGCGCGAAATATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAGTTTGAGTTGATGGAGTTATTGGACGTGGGATTATCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATCGCTTCTCCTCCTTATCAGACCGTGCTTTCTTTGATGGAGCAAAGACTTCAAAACGAGCATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGGATTCCATTTGGTGTTTTGACAGAACTTGTTGGTCCTGCTGGAATTGGCAAGACGCAATTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTGCCACCGAGCTACGGAGGTTTAGCTGGCCGTGTGATATATATTGATGTGGAATCTAAGTTTAGTTCCAGAAGGATGATTGAAATTGGCATGAGAAGCTTTCCTGATGTATTTCAGAAGAAAGACATGGCAAAAGAGATGGCTGGTAGGATCCTTGTTTTGCGGCCAGCATCACTTTCTGAATTCACTGAGAGTTTACACAAAATCAAGGTTTCACTTCTTGAGCAAGAAATAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGAGAATATGAGCAAGGGGCACCCAAACAGCATTCATTGGGTTGGCATATTTCATTTATCAAGTCAATTGCTGAGTTCGCACGAATTCCAATTGTCGTGACAAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGCAGTGAAATTCAAGAATGTTCTTCAGGATATGATTCTCATCTTGTTGCTGCCTTGGGAGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCAGCATAACCTCATCCGGAATTTCCTTGCTGAGCGACAACGGAAAAGAACTGAGTGGAGCAGAGATCAACGAGATTCACTGCCAAGGACACAGTGACATTATCAGCTATCAATTAGGAAAGCAGCAGTGA

Protein sequence

MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHSDIISYQLGKQQ

Homology

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BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot
Match: Q9SK02 (DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=2 SV=2)

HSP 1 Score: 503.1 bits (1294), Expect = 2.8e-141
Identity = 251/365 (68.77%), Postives = 308/365 (84.38%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KL+  A+ P +YGGL GRVIYIDVESKFSSRR+IE+G+ SFP+VF  K MA+EMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++GE + GA +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           +AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSDNG EL G  IN IH +GHS
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHS 360

Query: 361 DIISY 366
           D+I++
Sbjct: 361 DMINF 365

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BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-47
Identity = 119/360 (33.06%), Postives = 198/360 (55.00%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           M +K + ++GL + + +  +   I T ++ L L+  ELM++  +    V   +  +S   
Sbjct: 1   MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRAC 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           +P  QT   +  QR   +     LST L  LDEAL GG+  G LTE+ GP G GKTQFC+
Sbjct: 61  APKMQTAYGIKAQR-SADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
            +S LA LP + GGL G V+YID ES FS+ R++EI    FP  F  ++     + ++ +
Sbjct: 121 MMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHL 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYE---QGAPKQHS--LGWHI 240
            R  +  E  + +  ++  ++ + IKLVI+DS+A+++  E++   QG  K+ +  L    
Sbjct: 181 YRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREA 240

Query: 241 SFIKSIAEFARIPIVVTNQVRSRNRNEVSHYS--FQGLSSSEIQECSSGYDSHLVAALGV 300
           S +K +AE   IP+++TNQ+ +     ++  +          + E +SG  S ++AALG 
Sbjct: 241 SSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSEGTSG-SSCVIAALGN 300

Query: 301 HWAHSVTIRLVLE-AKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEIN 353
            W+HSV  RL+L+   S +R I +AKSP++P  +F ++I   G+ L       ++ AE+N
Sbjct: 301 TWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGLVLQETTFCSVTQAELN 358

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BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot
Match: O35719 (DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-45
Identity = 119/347 (34.29%), Postives = 191/347 (55.04%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           M++K + ++GL   + +  +   I   +  LSL+  ELM++  +    V   +  +S+  
Sbjct: 1   MSSKKLRRVGLSPELCDRLSRYQIVNCQHFLSLSPLELMKVTGLSYRGVHELLHTVSKAC 60

Query: 61  SPPYQTVLSLMEQRLQNEHLA-GHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFC 120
           +P  QT   L  +R  + HL+   LST L  LDEAL GG+P G LTE+ GP G GKTQFC
Sbjct: 61  APQMQTAYELKTRR--SAHLSPAFLSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFC 120

Query: 121 LKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRIL 180
           + +S LA LP S GGL G V+YID ES F++ R++EI    FP  F  ++     + R+ 
Sbjct: 121 IMMSVLATLPTSLGGLEGAVVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVH 180

Query: 181 VLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYE---QGAPKQHS--LGWH 240
           + R  +     + L  ++  ++ + +KLVI+DS+A+++  E++   QG  K+ +  LG  
Sbjct: 181 LCRELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKG 240

Query: 241 ISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYS--FQGLSSSEIQECSSGYDSHLVAALG 300
            S +K +A    IP+++TNQ+ +     +   +          + E +SG  S LVAALG
Sbjct: 241 ASLLKYLAGEFSIPVILTNQITTHLSGALPSQADLVSPADDLSLSEGTSG-SSCLVAALG 300

Query: 301 VHWAHSVTIRLVLE-AKSGQRFIKLAKSPMSPPLAFPFSITSSGISL 339
             W H V  RL+L+   S +R I +AKSP++   +F ++I   G+ L
Sbjct: 301 NTWGHCVNTRLILQYLDSERRQILIAKSPLAAFTSFVYTIKGEGLVL 344

[Close]

BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot
Match: Q74MX9 (DNA repair and recombination protein RadA OS=Nanoarchaeum equitans (strain Kin4-M) OX=228908 GN=radA PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-23
Identity = 102/333 (30.63%), Postives = 152/333 (45.65%), Query Frame = 0


Query: 12  PRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAV-AHISEIASPPYQTVLSL 71
           P++   + +A   +  K A +  E ELME  D+G +     + A +  +    ++T   +
Sbjct: 21  PKTAEKLISAGYDSLIKIASASVE-ELMEAADIGEATARKIIEAAMERLGLLEFKTAEEV 80

Query: 72  MEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPP 131
           +E+R +       ++T  K LD  L GGI    LTE  G  G GKTQ   +L+    LPP
Sbjct: 81  LEERQK----TARITTMSKNLDSLLGGGIETAALTEFYGEYGSGKTQVGHQLAVDVQLPP 140

Query: 132 SYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILVLRPASLS--E 191
             GGL G+ +YID E  F   R+ +  M    D+  KK +      ++       L+  +
Sbjct: 141 EQGGLEGKAVYIDTEGTFRPERIKQ--MAEALDLDPKKALKNVYHMKVFNTDHQMLAARK 200

Query: 192 FTESLHKIKVSLLEQEIKLVIIDSMAALITGEYE---QGAPKQHSLGWHISFIKSIAEFA 251
             E + K       + IKL+++DS+ AL   EY    Q A +QH LG H+  +  IAE  
Sbjct: 201 AEELIRK------GEPIKLIVVDSLTALFRAEYTGRGQLAERQHKLGRHVHDLLRIAELY 260

Query: 252 RIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVH-WAHSVTIRLV 311
            + I VTNQV ++  + +                  G DS  V A+G H  AH+ T R+ 
Sbjct: 261 NVAIYVTNQVMAKPDSFI-----------------PGLDS--VQAVGGHVLAHASTYRVF 320

Query: 312 L-EAKSGQRFIKLAKSPMSPPLAFPFSITSSGI 337
           L + K G R  +L  SP  P     F IT  GI
Sbjct: 321 LRKGKKGIRIARLVDSPHLPERETTFVITEEGI 321

[Close]

BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot
Match: Q2NE95 (DNA repair and recombination protein RadA OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) OX=339860 GN=radA PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.9e-22
Identity = 89/311 (28.62%), Postives = 143/311 (45.98%), Query Frame = 0


Query: 34  TEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDE 93
           T  EL   +++G    A  +    +     ++T   +ME+R       G ++T  KGLDE
Sbjct: 33  TPKELSVKVEIGEGVAAKVIEAARKAEKIDFETAFEVMERRED----VGRITTGSKGLDE 92

Query: 94  ALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRM 153
            + GGI    +TE+ G  G GK+Q   +LS    LP   GGL G V++ID E+ F   R+
Sbjct: 93  LIGGGIETQSITEVYGEFGSGKSQISHELSVTTQLPVEEGGLDGEVVFIDTENTFRPERI 152

Query: 154 IEIGM---RSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVII 213
            +I      +  +V +K  +A+       +L    ++E  +S            IKL+II
Sbjct: 153 EQIAEGFGLNIEEVLKKIHVARAFNSSHQILMADKINELIQS---------GVNIKLIII 212

Query: 214 DSMAALITGEY---EQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYS 273
           DS+ A    EY   E  A +Q  L  H+  +++IA    + +++TNQV+S+        S
Sbjct: 213 DSLMAHFRAEYVGRESLATRQQKLNQHLHTLQTIANTYNVAVLITNQVQSKPD------S 272

Query: 274 FQGLSSSEIQECSSGYDSHLVAALGVH-WAHSVTIRLVL-EAKSGQRFIKLAKSPMSPPL 333
           F G  +                A+G H   H+ T R++L +  SG+R  +L  SP  P  
Sbjct: 273 FFGTPTK---------------AVGGHVLGHASTYRILLKKGLSGKRIARLVDSPHLPEG 309

Query: 334 AFPFSITSSGI 337
              F +T+ G+
Sbjct: 333 ESVFKVTTEGL 309

[Close]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL
Match: A0A6J1FTX6 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448118 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 5.9e-203
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIISYQLGKQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL
Match: A0A6J1JH72 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484351 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 369/371 (99.46%), Postives = 369/371 (99.46%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGLAGRVIYIDVE KFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLS SEIQECSSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIISYQLGKQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL
Match: A0A0A0KFZ1 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.4e-190
Identity = 348/371 (93.80%), Postives = 358/371 (96.50%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGL GRVIYIDVESKFSS+RMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGMRSFPDVFNKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYE GAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE SSGY SH+VAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQEYSSGYGSHIVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF+IT+SGISLLS+NG+ELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIIS  LGK Q
Sbjct: 361 DIISNHLGKHQ 371

[Close]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL
Match: A0A1S3CKQ5 (DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501904 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 9.8e-190
Identity = 347/371 (93.53%), Postives = 356/371 (95.96%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLS+VASAVAHISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSDVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVF KKDMAKEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFNKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYE GAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE SSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRKEVSHYSFQGRSRSESQEYSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLE KSGQRFIKLAKSPMSPPLAFPF+IT SG+SLL++NG+ELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEVKSGQRFIKLAKSPMSPPLAFPFTITPSGVSLLTNNGEELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DII   LGK Q
Sbjct: 361 DIIINHLGKHQ 371

[Close]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL
Match: A0A1S4E4D5 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501904 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.0e-186
Identity = 347/392 (88.52%), Postives = 356/392 (90.82%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAK---------------------EALSLTEFELM 60
           MAN+LINQMGLPRSIANIFAARNINTAK                     EALSLTEFELM
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKSEFVMSPIEWDSLFWVLFPGSEALSLTEFELM 60

Query: 61  ELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGI 120
           ELLDVGLS+VASAVAHISEIASPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGI
Sbjct: 61  ELLDVGLSDVASAVAHISEIASPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGI 120

Query: 121 PFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMR 180
           PFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGL GRVIYIDVESKFSSRRMIEIGMR
Sbjct: 121 PFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMR 180

Query: 181 SFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITG 240
           SFPDVF KKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITG
Sbjct: 181 SFPDVFNKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITG 240

Query: 241 EYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQEC 300
           EYE GAPKQHSLGWHISFIKSIAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE 
Sbjct: 241 EYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGRSRSESQEY 300

Query: 301 SSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLL 360
           SSGYDSHLVAALGVHWAHSVTIRLVLE KSGQRFIKLAKSPMSPPLAFPF+IT SG+SLL
Sbjct: 301 SSGYDSHLVAALGVHWAHSVTIRLVLEVKSGQRFIKLAKSPMSPPLAFPFTITPSGVSLL 360

Query: 361 SDNGKELSGAEINEIHCQGHSDIISYQLGKQQ 372
           ++NG+ELSGAEINEIHCQGHSDII   LGK Q
Sbjct: 361 TNNGEELSGAEINEIHCQGHSDIIINHLGKHQ 392

[Close]

BLAST of CmoCh20G004940 vs. NCBI nr
Match: XP_022943309.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943311.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943312.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_023511983.1 DNA repair protein RAD51 homolog 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIISYQLGKQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CmoCh20G004940 vs. NCBI nr
Match: XP_022986663.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986665.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 369/371 (99.46%), Postives = 369/371 (99.46%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGLAGRVIYIDVE KFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLS SEIQECSSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIISYQLGKQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CmoCh20G004940 vs. NCBI nr
Match: KAG6570753.1 (DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 707.2 bits (1824), Expect = 7.4e-200
Identity = 366/371 (98.65%), Postives = 369/371 (99.46%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHL+GHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAAL PSYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVFQK+DMAKEMAGRILV
Sbjct: 121 KLSFLAALLPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKEDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIISYQLGKQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CmoCh20G004940 vs. NCBI nr
Match: XP_038901703.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901704.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901705.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901707.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901708.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 677.9 bits (1748), Expect = 4.8e-191
Identity = 351/371 (94.61%), Postives = 357/371 (96.23%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFEL+ELLDVGLSEVASAVA ISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELIELLDVGLSEVASAVALISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQG S SE  ECS GYDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGWSRSETHECSPGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF IT SGISLLSDNG+ELSGA INEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITPSGISLLSDNGEELSGAAINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIIS  LGK Q
Sbjct: 361 DIISNHLGKHQ 371

[Close]

BLAST of CmoCh20G004940 vs. NCBI nr
Match: XP_031744046.1 (DNA repair protein RAD51 homolog 2 [Cucumis sativus] >KGN47322.1 hypothetical protein Csa_023030 [Cucumis sativus])

HSP 1 Score: 674.1 bits (1738), Expect = 6.9e-190
Identity = 348/371 (93.80%), Postives = 358/371 (96.50%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KLSFLAALPPSYGGL GRVIYIDVESKFSS+RMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGMRSFPDVFNKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYE GAPKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNR EVSHYSFQG S SE QE SSGY SH+VAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQEYSSGYGSHIVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF+IT+SGISLLS+NG+ELSGAEINEIHCQGHS
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAEINEIHCQGHS 360

Query: 361 DIISYQLGKQQ 372
           DIIS  LGK Q
Sbjct: 361 DIISNHLGKHQ 371

[Close]

BLAST of CmoCh20G004940 vs. TAIR 10
Match: AT2G28560.2 (DNA repair (Rad51) family protein )

HSP 1 Score: 503.1 bits (1294), Expect = 2.0e-142
Identity = 251/365 (68.77%), Postives = 308/365 (84.38%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KL+  A+ P +YGGL GRVIYIDVESKFSSRR+IE+G+ SFP+VF  K MA+EMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++GE + GA +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           +AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSDNG EL G  IN IH +GHS
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHS 360

Query: 361 DIISY 366
           D+I++
Sbjct: 361 DMINF 365

[Close]

BLAST of CmoCh20G004940 vs. TAIR 10
Match: AT2G28560.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 492.7 bits (1267), Expect = 2.7e-139
Identity = 248/361 (68.70%), Postives = 302/361 (83.66%), Query Frame = 0


Query: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANKLI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180
           KL+  A+ P +YGGL GRVIYIDVESKFSSRR+IE+G+ SFP+VF  K MA+EMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ ++KL++IDSM AL++GE + GA +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300
           +AEF+RIPIVVTNQVRS+NR+E S YSFQ     E ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSDNG EL G  IN IH +G  
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGIV 360

Query: 361 D 362
           D
Sbjct: 361 D 361

[Close]

BLAST of CmoCh20G004940 vs. TAIR 10
Match: AT2G28560.3 (DNA repair (Rad51) family protein )

HSP 1 Score: 461.5 bits (1186), Expect = 6.6e-130
Identity = 227/333 (68.17%), Postives = 281/333 (84.38%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLD 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+  SL+E++++NEHL+GHL T LKGLD
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLLEKKVENEHLSGHLPTHLKGLD 60

Query: 93  EALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRR 152
           + L GGIPFGVLTELVGP GIGK+QFC+KL+  A+ P +YGGL GRVIYIDVESKFSSRR
Sbjct: 61  DTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRR 120

Query: 153 MIEIGMRSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDS 212
           +IE+G+ SFP+VF  K MA+EMAGRILVLRP SL+ FTES+ ++K S+L+ ++KL++IDS
Sbjct: 121 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDS 180

Query: 213 MAALITGEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLS 272
           M AL++GE + GA +Q  LGWHISF+KS+AEF+RIPIVVTNQVRS+NR+E S YSFQ   
Sbjct: 181 MTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKV 240

Query: 273 SSEIQECSSGYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSIT 332
             E ++ +  YDSHLVAALG++WAH+VTIRLVLEAKSGQR IK+AKSPMSPPLAFPF IT
Sbjct: 241 KDEFKDNTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHIT 300

Query: 333 SSGISLLSDNGKELSGAEINEIHCQGHSDIISY 366
           S+GISLLSDNG EL G  IN IH +GHSD+I++
Sbjct: 301 SAGISLLSDNGTELKGPGINTIHARGHSDMINF 333

[Close]

BLAST of CmoCh20G004940 vs. TAIR 10
Match: AT2G28560.4 (DNA repair (Rad51) family protein )

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-90
Identity = 160/237 (67.51%), Postives = 202/237 (85.23%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLD 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+  SL+E++++NEHL+GHL T LKGLD
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLLEKKVENEHLSGHLPTHLKGLD 60

Query: 93  EALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLAGRVIYIDVESKFSSRR 152
           + L GGIPFGVLTELVGP GIGK+QFC+KL+  A+ P +YGGL GRVIYIDVESKFSSRR
Sbjct: 61  DTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRR 120

Query: 153 MIEIGMRSFPDVFQKKDMAKEMAGRILVLRPASLSEFTESLHKIKVSLLEQEIKLVIIDS 212
           +IE+G+ SFP+VF  K MA+EMAGRILVLRP SL+ FTES+ ++K S+L+ ++KL++IDS
Sbjct: 121 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDS 180

Query: 213 MAALITGEYEQGAPKQHSLGWHISFIKSIAEFARIPIVVTNQVRSRNRNEVSHYSFQ 270
           M AL++GE + GA +Q  LGWHISF+KS+AEF+RIPIVVTNQVRS+NR+E S YSFQ
Sbjct: 181 MTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQ 237

[Close]

BLAST of CmoCh20G004940 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-21
Identity = 81/287 (28.22%), Postives = 130/287 (45.30%), Query Frame = 0


Query: 75  LQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGG 134
           L  E     ++T    LD  L GGI    +TE+ G  GIGKTQ  ++LS    +P   GG
Sbjct: 120 LHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGG 179

Query: 135 LAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKD-MAKEMAGRILVLRPASLSE----- 194
           L G+ IYID E  F   R ++I      D+ +    M K      + ++P  + E     
Sbjct: 180 LGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYF 239

Query: 195 ----FTESL----HKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLG-WHISFIK 254
               +TE +    H  K     +++K+VI+DS+      +Y+  A +   L    + F+K
Sbjct: 240 RVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMK 299

Query: 255 SIAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSV 314
              +F+ + +V+ NQV ++     S  SFQ                 L  ALG  W+HS 
Sbjct: 300 LAKKFS-LAVVLLNQVTTK----FSEGSFQ-----------------LALALGDSWSHSC 359

Query: 315 TIRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKEL 347
           T R++L     +R+  + KSP  P  +  +++TS G+   S + K +
Sbjct: 360 TNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRV 384

The following BLAST results are available for this feature:

BLAST of CmoCh20G004940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK02	2.8e-141	68.77	DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=...	[more]
O15315	2.3e-47	33.06	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]
O35719	4.9e-45	34.29	DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2	[more]
Q74MX9	3.1e-23	30.63	DNA repair and recombination protein RadA OS=Nanoarchaeum equitans (strain Kin4-...	[more]
Q2NE95	9.9e-22	28.62	DNA repair and recombination protein RadA OS=Methanosphaera stadtmanae (strain A...	[more]

BLAST of CmoCh20G004940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTX6	5.9e-203	100.00	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JH72	1.1e-201	99.46	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KFZ1	3.4e-190	93.80	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4...	[more]
A0A1S3CKQ5	9.8e-190	93.53	DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S4E4D5	5.0e-186	88.52	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

BLAST of CmoCh20G004940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943309.1	1.2e-202	100.00	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310...	[more]
XP_022986663.1	2.3e-201	99.46	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1...	[more]
KAG6570753.1	7.4e-200	98.65	DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901703.1	4.8e-191	94.61	DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901704....	[more]
XP_031744046.1	6.9e-190	93.80	DNA repair protein RAD51 homolog 2 [Cucumis sativus] >KGN47322.1 hypothetical pr...	[more]

BLAST of CmoCh20G004940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28560.2	2.0e-142	68.77	DNA repair (Rad51) family protein	[more]
AT2G28560.1	2.7e-139	68.70	DNA repair (Rad51) family protein	[more]
AT2G28560.3	6.6e-130	68.17	DNA repair (Rad51) family protein	[more]
AT2G28560.4	3.0e-90	67.51	DNA repair (Rad51) family protein	[more]
AT2G45280.2	2.3e-21	28.22	RAS associated with diabetes protein 51C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 101..274 e-value: 0.0073 score: 25.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 64..337 e-value: 3.4E-58 score: 199.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 83..339
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 1..342 e-value: 7.5E-56 score: 187.4
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 83..337 e-value: 1.1E-38 score: 133.0
IPR030548	DNA repair protein RAD51 homologue 2	PANTHER	PTHR46456	DNA REPAIR PROTEIN RAD51 HOMOLOG 2	coord: 1..365
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 80..255 score: 39.204624

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004940.1	CmoCh20G004940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding