CmoCh20G004260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MPP6 domain-containing protein
Location	Cmo_Chr20: 2010952 .. 2012995 (+)
RNA-Seq Expression	CmoCh20G004260
Synteny	CmoCh20G004260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCGCGCTCGCGAACGCGAAAGTGGAGGAGACGTAGAAAATTGATTAGACATTGGAAGTTCGTTGTTCGAGCTTTCCTTTTCTCTAATCGTTATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGGTAAACTAAGCTTCAGATTTTTTTTTTTCTTTCAGATTTACTGCCTTATCATGCTTCATTAGTGTTTCAACTTTCTGGTTGTTGGTTAATTGGTCTAGGGAACTGCCAAATTATGTTTGAGATTTCTTTATTTTGATTCTGTTCTTGCTTTGTGCTTATGAGGAACCGATTTAAATTGTTATGCGAGTTATTGATTTTTTTGTTTTGCCATTAGTTCATGCAAAGGGCGGGTCAGAGAGAGGATCAACCTAAGAGAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGGTAGGCTGTTGGTCTTTTCAATGGTTTGTTTGTTACTTTTGATTTATGGTTGTTTCACTACCTTTTCTAGTTGTTTATGATCTTTTCTTTTCTTTTCTTTTCTTTTTTCGTTTTTTCATGATGCAACAAACTGTACACAATTCTACCGCATTGTTCTGCGGGAGCAGTTTATTTGCTGAAAACGGACAATACATTTGAAATATTGATGGATTATGTGCTTTTGGCGTTCCTTGTTTATCTTTATCATTATTGCTAGAGTTTTTCACTCTGAATGTGATAGATAGAAATATACATGCCTGCGATGGAAGTAATTCCATACAGTATAAATTTTATTCGTGCCTGTCTTGCTACAGAAAGTCTAGGATAGAATGAGAACCTTTTGTATCTGCTTCTAGTGTGACATCTTTACGCATCAAGCCAATCTCTGCTTTTGGCCGTGATAGTCGCTTTATGTCAACTTAGCTCTTTGATATCTTTTTTCAAGAAACTGATTTTTTTTTTTTTTCTTCCATGTTGTAGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATGTGAGTATATATTTTCAGTGTCCTAAAGTTTATCTGTGGACTATAGCCCTTTGTGTTTTGCATGCCTTTCGTCTCACATCAAAGCTTTGCCATTATAGAGACTCAATGAAGAAATAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGGTTAGTGGTTATAATTTCACCTGTTTCGCTCTTTCTTTTGGAAAATTATAGCTGCCTTTATGATGTTTTATTAAACTACTTTTCTAGGATGTTTTATCAAACTACTTCTAGGATGTTTTATTAAACTGCTGTTCTTGCTAAGCATCAATTTTTCCTAAATGAAGCTAGCATTCTGTGTCTCACTGTCTTGCAACAACATAGTGGTTTCTACAAATTTAGTTGTAATCAGCATCTGCATTTAGGTATGTATTAGGAGTAAAGTTTGTGAGAATCCCTTTTTGTATAACAAGTAAAATATGAATAACATTAACAAAATTGTTGCCTTAAATCGTGTAATGGAGCTTTTTTTTATAAAGAAAAATCAAACTTTTATTGAGAAAAAAAATGTAATGGAGCTTTATGTTGTATATTTCTCTTCCCCCCCCCCCCCTTGTGGGGGTGGGGGTTTGAAATAGAACATTCATTCCCACAGAAAGTCACTTGAAAGTAGTTATCATTCTTTTTTTTTCCCCTTTTACCCTTTCATCTTCAGACAAAAAATTTTGTTCCCCAGAGATAATGGATCTTCACAAAATGAAGCCTCCTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAA

mRNA sequence

GCGCGCGCTCGCGAACGCGAAAGTGGAGGAGACGTAGAAAATTGATTAGACATTGGAAGTTCGTTGTTCGAGCTTTCCTTTTCTCTAATCGTTATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGTTCATGCAAAGGGCGGGTCAGAGAGAGGATCAACCTAAGAGAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATAGACTCAATGAAGAAATAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGACAAAAAATTTTGTTCCCCAGAGATAATGGATCTTCACAAAATGAAGCCTCCTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAA

Coding sequence (CDS)

ATGGCGAAGCGCGAGCTTTCCAATACATTAAGGAACTTGAAGTTCATGCAAAGGGCGGGTCAGAGAGAGGATCAACCTAAGAGAGAGGAAGAAGTAAAGCCTGATGAGAATTTCTTTCCTTCGAGTACTATAATTAGAAAGTGTGTAGTTTTAGTTGAAGGAGATCCTCATCCAGGCGCTTTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAATTGATAGACTCAATGAAGAAATAGCTAGCTTAGGCCAGCATGAAATTCCTGGCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGACAAAAAATTTTGTTCCCCAGAGATAATGGATCTTCACAAAATGAAGCCTCCTGCTCAAACATTGATGAAAAAAATTGTGAGGCTAATGAGGATCTTAAAAGGAAACAATCTGAAGTAGTTTCTGATGGACGGCATCCAACTAAGTTTCCAAGAAGTGGTCGGGACAACCAGCAATCATCATTTAGTCATGGTAAAGGACCTTCCAAAAAACCAAAGGGTGAAAAGCTGGACTGGAATGTTCTTAGGCCCTCCAAGACTCCCAATAAGAGTGGATAA

Protein sequence

MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGAFKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEASCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKLDWNVLRPSKTPNKSG

Homology

[Close]

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL
Match: A0A6J1FT40 (uncharacterized protein LOC111448524 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448524 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.6e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL
Match: A0A6J1FUG1 (uncharacterized protein LOC111448524 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448524 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 188/195 (96.41%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 188

[Close]

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL
Match: A0A6J1JHH4 (uncharacterized protein LOC111484532 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484532 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 181/195 (92.82%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+ PK+EEEVK DENFFPSSTIIRKCVVLVEGD HPG 
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEHPKKEEEVKTDENFFPSSTIIRKCVVLVEGDTHPGD 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNE++ASL QHEIPGSS GNH GNLSSRQK LFPRDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEDVASLDQHEIPGSSPGNHCGNLSSRQKFLFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSN DEKNCEANEDLKRKQS VVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNSDEKNCEANEDLKRKQSVVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL
Match: A0A6J1JFF6 (uncharacterized protein LOC111484532 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484532 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 175/195 (89.74%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+ PK+EEEVK DENFFPSSTIIRKCVVLVEGD HPG 
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEHPKKEEEVKTDENFFPSSTIIRKCVVLVEGDTHPGD 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNE++ASL QHEIPGSS GNH GNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEDVASLDQHEIPGSSPGNHCGNLSS-------RDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSN DEKNCEANEDLKRKQS VVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNSDEKNCEANEDLKRKQSVVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 188

[Close]

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL
Match: A0A6J1G7T2 (uncharacterized protein LOC111451657 OS=Cucurbita moschata OX=3662 GN=LOC111451657 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 154/195 (78.97%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVKP+EN FPSS IIRKCVVLVEGDPHPGA
Sbjct: 1   MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKPEENLFPSSNIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
            +GR+SFQSFNPSID+LNEE+ASLGQ E P  SSGNHS N+SS       R+NGSS+NEA
Sbjct: 61  LQGRLSFQSFNPSIDKLNEEVASLGQRETPDPSSGNHSENVSS-------RENGSSRNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
             SN DEKNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  KKPKGE L
Sbjct: 121 VFSNNDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFKKPKGENL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNK G
Sbjct: 181 DWNVLRPSKTPNKRG 188

[Close]

BLAST of CmoCh20G004260 vs. NCBI nr
Match: XP_022943951.1 (uncharacterized protein LOC111448524 isoform X1 [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of CmoCh20G004260 vs. NCBI nr
Match: XP_023512011.1 (uncharacterized protein LOC111776852 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99
Identity = 187/195 (95.90%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVK DENFFPSSTIIRKCVVLVEG PHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKTDENFFPSSTIIRKCVVLVEGYPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSSRQK LFPRDNGSSQNE 
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSSRQKFLFPRDNGSSQNEV 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
            CSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 LCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of CmoCh20G004260 vs. NCBI nr
Match: XP_022943952.1 (uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 3.6e-97
Identity = 188/195 (96.41%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 188

[Close]

BLAST of CmoCh20G004260 vs. NCBI nr
Match: KAG6570693.1 (hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010540.1 hypothetical protein SDJN02_27334, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96
Identity = 185/195 (94.87%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNEE+ASLGQHEIPGSSSGNHSGNLSS       RDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEEVASLGQHEIPGSSSGNHSGNLSS-------RDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 188

[Close]

BLAST of CmoCh20G004260 vs. NCBI nr
Match: XP_022986944.1 (uncharacterized protein LOC111484532 isoform X1 [Cucurbita maxima])

HSP 1 Score: 359.0 bits (920), Expect = 2.6e-95
Identity = 181/195 (92.82%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRELSNTLRNLKFMQRAGQRE+ PK+EEEVK DENFFPSSTIIRKCVVLVEGD HPG 
Sbjct: 1   MAKRELSNTLRNLKFMQRAGQREEHPKKEEEVKTDENFFPSSTIIRKCVVLVEGDTHPGD 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
           FKGRMSFQSFNPSIDRLNE++ASL QHEIPGSS GNH GNLSSRQK LFPRDNGSSQNEA
Sbjct: 61  FKGRMSFQSFNPSIDRLNEDVASLDQHEIPGSSPGNHCGNLSSRQKFLFPRDNGSSQNEA 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180
           SCSN DEKNCEANEDLKRKQS VVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL
Sbjct: 121 SCSNSDEKNCEANEDLKRKQSVVVSDGRHPTKFPRSGRDNQQSSFSHGKGPSKKPKGEKL 180

Query: 181 DWNVLRPSKTPNKSG 196
           DWNVLRPSKTPNKSG
Sbjct: 181 DWNVLRPSKTPNKSG 195

[Close]

BLAST of CmoCh20G004260 vs. TAIR 10
Match: AT5G59460.1 (scarecrow-like transcription factor 11 (SCL11) )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 90/194 (46.39%), Postives = 118/194 (60.82%), Query Frame = 0


Query: 1   MAKRELSNTLRNLKFMQRAGQREDQPKREEEVKPDENFFPSSTIIRKCVVLVEGDPHPGA 60
           MAKRE+S+TLRNLKFMQR+  + ++ K +EE +P+ +F    T+ +KCVV+ + DP PGA
Sbjct: 1   MAKREISSTLRNLKFMQRSSLKVEKKKADEE-EPNGSFPSLRTVAKKCVVITDWDPQPGA 60

Query: 61  FKGRMSFQSFNPSIDRLNEEIASLGQHEIPGSSSGNHSGNLSSRQKILFPRDNGSSQNEA 120
             GRMSFQSFNPSI++L+EE  + G    P SSS N                   S +E 
Sbjct: 61  LLGRMSFQSFNPSIEKLHEEAINGGN---PSSSSSN---------------GGKKSFSEP 120

Query: 121 SCSNIDEKNCEANEDLKRKQSEVVSDGRH-PTKFPRSGRDNQQSSFSHGKGPSKKPKGEK 180
             S + E + E + DLKRKQSEVVS+ ++ P K PRS  D    S   G G  KKPK +K
Sbjct: 121 ESSKV-EPSGETDGDLKRKQSEVVSEEQNRPNKSPRS-FDKPSPSNKKGNG-FKKPKSKK 172

Query: 181 LDWNVLRPSKTPNK 194
           +DW+VLRP K   K
Sbjct: 181 VDWSVLRPPKPQTK 172

The following BLAST results are available for this feature:

BLAST of CmoCh20G004260 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G004260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT40	5.6e-104	100.00	uncharacterized protein LOC111448524 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FUG1	1.8e-97	96.41	uncharacterized protein LOC111448524 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JHH4	1.3e-95	92.82	uncharacterized protein LOC111484532 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JFF6	1.3e-89	89.74	uncharacterized protein LOC111484532 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G7T2	2.0e-77	78.97	uncharacterized protein LOC111451657 OS=Cucurbita moschata OX=3662 GN=LOC1114516...	[more]

BLAST of CmoCh20G004260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943951.1	1.2e-103	100.00	uncharacterized protein LOC111448524 isoform X1 [Cucurbita moschata]	[more]
XP_023512011.1	3.9e-99	95.90	uncharacterized protein LOC111776852 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022943952.1	3.6e-97	96.41	uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]	[more]
KAG6570693.1	3.1e-96	94.87	hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986944.1	2.6e-95	92.82	uncharacterized protein LOC111484532 isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh20G004260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59460.1	1.2e-29	46.39	scarecrow-like transcription factor 11 (SCL11)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019324	M-phase phosphoprotein 6	PFAM	PF10175	MPP6	coord: 5..111 e-value: 2.3E-7 score: 31.3
IPR019324	M-phase phosphoprotein 6	PANTHER	PTHR13582	M-PHASE PHOSPHOPROTEIN 6	coord: 1..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004260.1	CmoCh20G004260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA