CmoCh20G000030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G000030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr20: 94471 .. 97972 (-)
RNA-Seq Expression	CmoCh20G000030
Synteny	CmoCh20G000030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGGACATACCGTTACCCATCTCTTCAACAAAGCCACTACGGCAGAAAGGGCATTTAATTTCCACGTCAACGATGGGATTCACCATTTGAGAACACATGTGACACCAATATCTTGTTGCAATTGACTCGTCCATCCTCGGTGTGTTGTGTTGTTACTTACTTTCACCGTTTCCTCTTATATCGTATCGTATCGTATGGTATTGTATTGTATTGTATGGTATTGTATTGCAGGATGATAACTTCCGATAGAAACCACAACCTTCAGCTATTCAATTTTCGAAAGAGAACAGGATGATCCCAAATCGAATGTAGCTAGCTCATCGCGGGAAAAGAAGAAAACAAAAAATCGTCAGATCAGATGTGATGTGGAATACACAAAAACTTGAAAACAATATCATGAAGGATGGGAGGAAAACTGTTAATTAGTATGGCAAGCAATATCATGAAGGATCGGAGGAAAACGAGGAAGAAGATGAAGAAGAAAAAGGAGTTACTTGAAAGCCGAAGCGTAGGTTGAGGAACTCAAGGAATCTGTGCGTTTGCTCCGATCGCAACCGGCGAATTGAAATGGAATGAATAGAATTGGGTGGAAGTGGAAAAGGGGAAGGGGAGGGAGGCCGTCGCGAACTGGAGAGAGAGAGACGAGAGACGAGAGAGACAGAATTCAACGAAACAAAAAAGTAAATAGAAAGGATTCTCTCTCCCTCTCTTTCTCTGGCACCCCGACCCTTCCTATCCGCTTCTTCAAACTCTCCCTTTCCCTCTCTCCCCCTTTATTGCATTTATTTTACTATTTTTTTTTTTTTTATATTTATTTTCTCAATTTCTCTCCCTGAAATTTTCCGACCATCCAATCTTTATTTGCCACATTCTCACATTACCCTCGTGTTTTATCTTTATGAGTAACATTTATTGTTATTTTTCGGTAATAATTTAAGCTTCCCATTTCAAAGAAATCCATATGATGCTTTGCAATTCATTGAGAGATCCACTTCGGCCATGGCTTCGTGATTATGTTAGGCTTCAGTCTTTCGCACTCATTCTCATTTATATCCAGGTGCATTCTTTCCCCCATCGGAACTATCATTCTTTGTTATCTCTATTTTCAGTTCTTAATCTTAATCTATTTTTTTGTAAATACATATGAGAAAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGCTTATAAATTTGGTGATCGCATTGTTCGCTTTGGTAGCCGTACATATGCTCTTCTCTCCCTCTCCCTTGTTTTAGAATGTTTAGTTTGTTTCTGGGAATGGGAGTCTTGACTGCTTGGCGCTTGTTCAAAGAGTAAAATTAGAAGGGACTCATTCAAAACAAGTTTGTGTTACATTATAATTCTATTTTTCATATTCATATGCTTCATACGATACCCAATAGGTACCCTATCCGCCCTCCAACTCTTTACCAATGCTTTTCCTTTCCTTTCTTTTAACTACTTGGATAAAATCATGATAAACCTTCCTCATTGTTTCATCTTTGACACTGGTCCGTGGCTGCACTGTAGTTTATCATCAGATAGATGAAGCTAATTCAATTTACGCAGAAACTTTACACTCTTGGTTGTTTCTCTAATTTCTGAAAAAATAGGATTTTGAATCAGCTATGATTAATGAAAAGAGATTTTGAATGAAGCTTTGATCTTGTATAGTTGCAACAACATCACTTGTACGCTTTATCATTTTCTACTGCAAGCCATCACCCAATCTAAATTAAGATATATATATCTAGATCTATCTATAAATATATAAGACTCTATTTGAGCAATGCATTCTCCGTTGTCCTGACACCAATCTTCTTGCCTGCCTTTTCTTTTCCAATGTTCATATTAAGTGCGCATGTGCATAGTGAGCTTCTAAATTGATGCATGGTGTTGACCGCTGTTTTACCCTGTAATTTGAATGAAAGGTTGCCTATATGCAGGAACGTTTCATCCAAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCTATGCAAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCCGCTACTCCTGTTGTAGTTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAAGATGGTCATGATAGTAAATGTTTGTCTGGGGTAATGTATCAACTTTTTACGCACTCCTGCTTGCACCCGTTCTGATCTGTTGTCATCCATTTACTAGTTCTAAATCTGCTAGCTATCATTGCTTCATTTTATATTTTACAAGTATTTGGTTTTCCACGGTGTCTTTTCCACGGTGTCTTAACACATTTATTGTAGTAACAAATGTCGGATACGGATACGTGTTCAACAAGTGTTGGACATGGACACGCTAGCTAACATTATCTGAGTTGTTCAAGTGTTCCTCATTGCCTTCATCCTCCAATTCTTAAATTGGCAGTCCTTCATTGGGCACATTCGTTAAAAACTTGTTCCTGTTGTTTACACCTGAAACACTTGTCAAGAGTAGGTCGGTTATAAGAATTAGATTTTGTTTTCTTTGAACTACCACCTTCCAAATCTATATTGGATGGTGTTATTGATTGGGATTTTGTCCTTTTTGGTTTGTTGCACAAGGAAGTTCCTTGTGCAAGATTGTTTGCGGCATCGATTGTATTTCTCCTTTGACCTTGCTGTTGCTTCCAAGTATTCCTTCTTTGGCAAGTCTTGACTGTTTTTTGCTAATTTTGTCTTTCGATCTTGGTAGCTAAGGTGATAGCCTCCGAAAGATAACCAAGAGGATGTAAATTGACTTCCTCTTTTTGCATCTTTTATTTTTTTTTATCAGCAGTAATCGACCAATTATAGCATCAATTCTTGCTGTTTTGTCTGCAGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCTGATGTGAGTTTCCTTATCTCAGACAATCAAACCTGTTAGCTTCCTTAGGCTTATAGAATTATTTTTACTCTTCCTAGCCAAATATTATTGTGTTTGTATATTTCACTGGATGATAGGAAGTGGGTCAATGTACTGGTTTGCCTCAGCTGTTTCTTTTAAAATCTTTGCCTTTTCTCTCTAGTGGAGTTTGTATCTTTAGAGCATCAGTCATTTTTCCTTTATTAAATGATTTTTTTTTTTTTTTTTTTTTTTTAAATTTCTGGTTAAAAATAAATATCAGTGGGAGGACATGGTAAATGAGAGACTGGAATGACTTTATTAATTCTTTTGTCTGCGATTTATAGAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGCCAGTACTAA

mRNA sequence

GCTGGACATACCGTTACCCATCTCTTCAACAAAGCCACTACGGCAGAAAGGGCATTTAATTTCCACGTCAACGATGGGATTCACCATTTGAGAACACATGTGACACCAATATCTTGTTGCAATTGACTCGTCCATCCTCGGATGATAACTTCCGATAGAAACCACAACCTTCAGCTATTCAATTTTCGAAAGAGAACAGGATGATCCCAAATCGAATGTAGCTAGCTCATCGCGGGAAAAGAAGAAAACAAAAAATCGTCAGATCAGATGTGATGTGGAATACACAAAAACTTGAAAACAATATCATGAAGGATGGGAGGAAAACTGTTAATTAGTATGGCAAGCAATATCATGAAGGATCGGAGGAAAACGAGGAAGAAGATGAAGAAGAAAAAGGAGTTACTTGAAAGCCGAAGCGTAGGTTGAGGAACTCAAGGAATCTGTGCGTTTGCTCCGATCGCAACCGGCGAATTGAAATGGAATGAATAGAATTGGGTGGAAGTGGAAAAGGGGAAGGGGAGGGAGGCCGTCGCGAACTGGAGAGAGAGAGACGAGAGACGAGAGAGACAGAATTCAACGAAACAAAAAAGTAAATAGAAAGGATTCTCTCTCCCTCTCTTTCTCTGGCACCCCGACCCTTCCTATCCGCTTCTTCAAACTCTCCCTTTCCCTCTCTCCCCCTTTATTGCATTTATTTTACTATTTTTTTTTTTTTTATATTTATTTTCTCAATTTCTCTCCCTGAAATTTTCCGACCATCCAATCTTTATTTGCCACATTCTCACATTACCCTCGTGTTTTATCTTTATGAGTAACATTTATTGTTATTTTTCGGTAATAATTTAAGCTTCCCATTTCAAAGAAATCCATATGATGCTTTGCAATTCATTGAGAGATCCACTTCGGCCATGGCTTCGTGATTATGTTAGGCTTCAGTCTTTCGCACTCATTCTCATTTATATCCAGGTGCATTCTTTCCCCCATCGGAACTATCATTCTTTGTTATCTCTATTTTCAGTTCTTAATCTTAATCTATTTTTTTGTAAATACATATGAGAAAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGCTTATAAATTTGGTGATCGCATTGTTCGCTTTGGAACGTTTCATCCAAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCTATGCAAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCCGCTACTCCTGTTGTAGTTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAAGATGGTCATGATAGTAAATGTTTGTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCTGATAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGCCAGTACTAA

Coding sequence (CDS)

ATGCAAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCCGCTACTCCTGTTGTAGTTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAAGATGGTCATGATAGTAAATGTTTGTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCTGATAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGCCAGTACTAA

Protein sequence

MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

Homology

[Close]

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL
Match: A0A6J1FVD5 (uncharacterized protein LOC111448786 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448786 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 121 TNLAGDKALIFTHDLTSCRQY 141

[Close]

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL
Match: A0A6J1FWG5 (uncharacterized protein LOC111448786 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448786 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 40  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 99

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 100 MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 159

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 160 TNLAGDKALIFTHDLTSCRQY 180

[Close]

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL
Match: A0A6J1FYK8 (uncharacterized protein LOC111448786 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448786 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 36  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 95

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 96  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 155

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 156 TNLAGDKALIFTHDLTSCRQY 176

[Close]

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL
Match: A0A1S3BP27 (uncharacterized protein LOC103491645 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491645 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.3e-53
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 117 MQIIGFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDD 176

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND 120
           MIGGSIYDPT  SS+FEDG DSKCLSGISHFGNGDN STSGPDVSRSKLSRHFQVAD D
Sbjct: 177 MIGGSIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADGD 235

[Close]

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL
Match: A0A0A0KWY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G266940 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.3e-53
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 117 MQIIGFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDD 176

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND 120
           MIGGSIYDPT  SS+FEDG DSKCLSGISHFGNGDN STSGPDVSRSKLSRHFQVAD++
Sbjct: 177 MIGGSIYDPTYYSSLFEDGQDSKCLSGISHFGNGDNGSTSGPDVSRSKLSRHFQVADDE 235

[Close]

BLAST of CmoCh20G000030 vs. NCBI nr
Match: XP_022944300.1 (uncharacterized protein LOC111448786 isoform X2 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 36  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 95

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 96  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 155

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 156 TNLAGDKALIFTHDLTSCRQY 176

[Close]

BLAST of CmoCh20G000030 vs. NCBI nr
Match: XP_022944299.1 (uncharacterized protein LOC111448786 isoform X1 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 40  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 99

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 100 MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 159

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 160 TNLAGDKALIFTHDLTSCRQY 180

[Close]

BLAST of CmoCh20G000030 vs. NCBI nr
Match: XP_022944301.1 (uncharacterized protein LOC111448786 isoform X3 [Cucurbita moschata] >XP_022944302.1 uncharacterized protein LOC111448786 isoform X3 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD
Sbjct: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
           MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 121 TNLAGDKALIFTHDLTSCRQY 141

[Close]

BLAST of CmoCh20G000030 vs. NCBI nr
Match: XP_023512555.1 (uncharacterized protein LOC111777262 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 6.1e-70
Identity = 135/141 (95.74%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQ IGFAVRLSSSLLWIQIYR GISYMETPVPREADYDLRNSFLSPAT VVVRQPSGSDD
Sbjct: 36  MQIIGFAVRLSSSLLWIQIYRLGISYMETPVPREADYDLRNSFLSPATSVVVRQPSGSDD 95

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
            IGGSIYDPT CSS+FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 96  TIGGSIYDPTYCSSLFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 155

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 156 TNLAGDKALIFTHDLTSCRQY 176

[Close]

BLAST of CmoCh20G000030 vs. NCBI nr
Match: XP_023512556.1 (uncharacterized protein LOC111777262 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023512557.1 uncharacterized protein LOC111777262 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 6.1e-70
Identity = 135/141 (95.74%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           MQ IGFAVRLSSSLLWIQIYR GISYMETPVPREADYDLRNSFLSPAT VVVRQPSGSDD
Sbjct: 1   MQIIGFAVRLSSSLLWIQIYRLGISYMETPVPREADYDLRNSFLSPATSVVVRQPSGSDD 60

Query: 61  MIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120
            IGGSIYDPT CSS+FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG
Sbjct: 61  TIGGSIYDPTYCSSLFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDG 120

Query: 121 TNLAGDKALIFTHDLTSCRQY 142
           TNLAGDKALIFTHDLTSCRQY
Sbjct: 121 TNLAGDKALIFTHDLTSCRQY 141

[Close]

BLAST of CmoCh20G000030 vs. TAIR 10
Match: AT1G55535.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 55/111 (49.55%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           M+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRNSFL+P TP + RQ SG+++
Sbjct: 118 MEMIGFFVRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEE 177

Query: 61  MIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNSSTSGPDVSRSK 109
           ++GGSIYDP   +S+FE+     +S   + ++H+  G+N S S  + S  K
Sbjct: 178 ILGGSIYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIK 228

[Close]

BLAST of CmoCh20G000030 vs. TAIR 10
Match: AT1G55535.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 55/111 (49.55%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDD 60
           M+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRNSFL+P TP + RQ SG+++
Sbjct: 118 MEMIGFFVRLSSSLLWFQIYRLGAAIVDTSLPRETDSDLRNSFLNPPTPAIARQCSGAEE 177

Query: 61  MIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNSSTSGPDVSRSK 109
           ++GGSIYDP   +S+FE+     +S   + ++H+  G+N S S  + S  K
Sbjct: 178 ILGGSIYDPAYYTSLFEESQTNINSPKATQVNHYSAGNNGSPSAAEASHIK 228

[Close]

BLAST of CmoCh20G000030 vs. TAIR 10
Match: AT3G13420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55535.1); Has 66 Blast hits to 66 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1   MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSP-------------- 60
           M+  GF VRLSSSLLW QIYR G S +++P PR++D DLRNSFL P              
Sbjct: 117 MEIAGFVVRLSSSLLWFQIYRLGASIIDSPFPRQSDSDLRNSFLEPPLLARQRSRDPELR 176

Query: 61  ----ATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDG 80
                 P + +Q S SD+++  SI +P S + + + G
Sbjct: 177 NSFLQAPAIAKQRSRSDEILEDSIDEPASYTPLLDGG 213

The following BLAST results are available for this feature:

BLAST of CmoCh20G000030 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G000030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVD5	1.2e-74	100.00	uncharacterized protein LOC111448786 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FWG5	1.2e-74	100.00	uncharacterized protein LOC111448786 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FYK8	1.2e-74	100.00	uncharacterized protein LOC111448786 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BP27	3.3e-53	91.60	uncharacterized protein LOC103491645 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KWY7	7.3e-53	90.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G266940 PE=4 SV=1	[more]

BLAST of CmoCh20G000030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944300.1	2.4e-74	100.00	uncharacterized protein LOC111448786 isoform X2 [Cucurbita moschata]	[more]
XP_022944299.1	2.4e-74	100.00	uncharacterized protein LOC111448786 isoform X1 [Cucurbita moschata]	[more]
XP_022944301.1	2.4e-74	100.00	uncharacterized protein LOC111448786 isoform X3 [Cucurbita moschata] >XP_0229443...	[more]
XP_023512555.1	6.1e-70	95.74	uncharacterized protein LOC111777262 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023512556.1	6.1e-70	95.74	uncharacterized protein LOC111777262 isoform X3 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CmoCh20G000030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55535.1	2.4e-24	49.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55535.2	2.4e-24	49.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13420.1	1.1e-13	41.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35471:SF1	OS07G0223700 PROTEIN	coord: 1..119
None	No IPR available	PANTHER	PTHR35471	OS07G0223700 PROTEIN	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G000030.1	CmoCh20G000030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane