CmoCh19G010480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G010480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L11
Location	Cmo_Chr19: 9118043 .. 9119912 (-)
RNA-Seq Expression	CmoCh19G010480
Synteny	CmoCh19G010480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCTGAAGACTCCAATGGTGTTTATTTTCGCTCTAGATACTGAAAGCTTCTATAGCCAAAATTTTCTTCCTGCTCCTTAATCCTTTTCGTTTGTTCATATGGCGCAGGCTTCGGAGAAGAAGTTGTCGAACCCCATGAGGGATATTAAGGTGCAGAAACTCGTCCTCAATATCTCAGTCGGTGAGAGTGGAGATCGGCTCACCAGAGCTGCTAAGGTATTACTTTGTTCCGTGCATTTTCTTTCTTCCTTTTGGTCGCTTCTCATTTCTGTCTCCGCCATTAACGATTCCTTTTGTTCAGGTGCTTGAGCAACTCAGCGGCCAGAGCCCCGTGTTCTCTAAAGGTACATGTTTTTCTCTCATCTTTCAGTCTCTTGACTTTGATTCTGGAATGGTCCGTATGAAAATAAGAAAATCTATAAACAACGAGAAATTTAGTATCGAACCTCTACAATCCATTCGTAGAATTGAAACTGATGCTATCTTTTGATAGTCATAGCTTGATATTGGATCTGATAGGCCATGTTATTTCTCGTGTTTTTTATTTTTGATTCTCTTGTTCTTGTGGTCAATAGCGAGATACACTGTACGATCGTTTGGAATCAGACGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGCGACAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGCTTCGCAGGAACTTCAGTGATACTGGTTGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGGATCAAGTAAGCCATTATCTATCTTAATATCCCTTGTATATCATGATCCATAATTTCAATGAGACTTACTGATTCTGTTATGCGTTGTGTATGAATGTGGTGAACTTGAAATGAAACATTAACTGAAATGAGGTGTATGTCAATTGGATGGTAGTTTTCCTGCTCGGTTCTCTGTGGTTGAATAGGGTTCTGGCTCAGGGATATCTCCTGACCCGTAGTGAATGATGTTATCGATATCTCTATAGGTCAGGGTTAGAAATTTTCTGGGTATTTGGAATAATGAGAAGGGAAGGCAGTCCTTACATTGTTCTGAATGAATTCATCCCAAACGTGTAAATCGATCTTTCGTGGCTTTGGAGATCGAAATTTTTCAGAGGATGTTGAGTAGGGGTATACGTGATCTTGCATTGATGAATCTGCCATCACTATGTATGAAGTTTTATTGTAACCGATCTCGTGTTTATGTATGCTATAATGATGTTTCAGGTACGATCCATCCACTGGTATCTACGGTATGGATTTCTTTGTGGTCTTGGAGCGACCAGGATACCGTGTTGGACGTCGCAGGAGGTGCAAGTCTCGTGTCGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCACAGCAAATAGTCTAAAGAGTTATAAAATTTTGTGGTTTTGTAAGCCTGACTGAAGCTCTTTGTTTTGTTTCCTTTGAATGTTTTTGGGATTTAATGGAGATTTTTAGGATAAATTTGGAGAACTCTGTTAGTCATATGTTTTATTAGTTATATCCTTTGTGGCCTGAGAATTAAGCTATCAATCTACCTGGTTTTTATTTTGTCACAAAATGGTGAGTTCTTGATTTGTTCCATTCATAAGTATTGGATTTTAAACTATCATTAATTAGCTTTGTTTTCATTGTTGGATTTAAATCTTGTATTTCCAATTTCTTTATATTTTTTTAATCTAAAGATTTTCATAAAATTAATGTGATTGAGCACAGCCTCAATTAGATTTACTTGCTATTCTTTTTTTTATTCTTTTTTTTTTAATTTTTATTTTATAGTTGAGTAG

mRNA sequence

CCCGCCTGAAGACTCCAATGGTGTTTATTTTCGCTCTAGATACTGAAAGCTTCTATAGCCAAAATTTTCTTCCTGCTCCTTAATCCTTTTCGTTTGTTCATATGGCGCAGGCTTCGGAGAAGAAGTTGTCGAACCCCATGAGGGATATTAAGGTGCAGAAACTCGTCCTCAATATCTCAGTCGGTGAGAGTGGAGATCGGCTCACCAGAGCTGCTAAGGTGCTTGAGCAACTCAGCGGCCAGAGCCCCGTGTTCTCTAAAGGTACATGTTTTTCTCTCATCTTTCAGTCTCTTGACTTTGATTCTGGAATGGTCCGTATGAAAATAAGAAAATCTATAAACAACGAGAAATTTAGTATCGAACCTCTACAATCCATTCCGAGATACACTGTACGATCGTTTGGAATCAGACGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGCGACAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGCTTCGCAGGAACTTCAGTGATACTGGTTGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGGATCAAGTACGATCCATCCACTGGTATCTACGGTATGGATTTCTTTGTGGTCTTGGAGCGACCAGGATACCGTGTTGGACGTCGCAGGAGGTGCAAGTCTCGTGTCGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGTTGAGTAG

Coding sequence (CDS)

ATGGCGCAGGCTTCGGAGAAGAAGTTGTCGAACCCCATGAGGGATATTAAGGTGCAGAAACTCGTCCTCAATATCTCAGTCGGTGAGAGTGGAGATCGGCTCACCAGAGCTGCTAAGGTGCTTGAGCAACTCAGCGGCCAGAGCCCCGTGTTCTCTAAAGGTACATGTTTTTCTCTCATCTTTCAGTCTCTTGACTTTGATTCTGGAATGGTCCGTATGAAAATAAGAAAATCTATAAACAACGAGAAATTTAGTATCGAACCTCTACAATCCATTCCGAGATACACTGTACGATCGTTTGGAATCAGACGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGCGACAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGCTTCGCAGGAACTTCAGTGATACTGGTTGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGGATCAAGTACGATCCATCCACTGGTATCTACGGTATGGATTTCTTTGTGGTCTTGGAGCGACCAGGATACCGTGTTGGACGTCGCAGGAGGTGCAAGTCTCGTGTCGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGTTGAGTAG

Protein sequence

MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEVE

Homology

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BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-85
Identity = 164/208 (78.85%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRGDKAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGDKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKARVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 311.2 bits (796), Expect = 8.9e-84
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKARVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 311.2 bits (796), Expect = 8.9e-84
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 2.9e-82
Identity = 160/208 (76.92%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSK          
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLER GYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 182 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.9e-82
Identity = 160/208 (76.92%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSK          
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLER GYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 182 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL
Match: A0A6J1GKX0 (60S ribosomal protein L11 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454896 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.9e-86
Identity = 171/211 (81.04%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRGDKAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGDKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL
Match: A0A5A7U1I5 (60S ribosomal protein L11 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003400 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 170/211 (80.57%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRG+KAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL
Match: A0A6J1D1S0 (60S ribosomal protein L11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016813 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 170/211 (80.57%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRG+KAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL
Match: A0A1S3AVK5 (60S ribosomal protein L11-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483409 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 170/211 (80.57%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRG+KAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL
Match: A0A3P5Z4G3 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA06T27503Z PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 166/208 (79.81%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKG    L+F  
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMFMLLVF-- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                    +  I RYTVRSFGIRRNEKIACYVTVRGDKAMQLL
Sbjct: 62  -------------------------IFIISRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 181

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 182

[Close]

BLAST of CmoCh19G010480 vs. NCBI nr
Match: XP_022952130.1 (60S ribosomal protein L11 isoform X1 [Cucurbita moschata] >XP_023511698.1 60S ribosomal protein L11 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 171/211 (81.04%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRGDKAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGDKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. NCBI nr
Match: XP_022148025.1 (60S ribosomal protein L11 isoform X1 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 5.9e-85
Identity = 170/211 (80.57%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRG+KAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. NCBI nr
Match: XP_004133951.1 (60S ribosomal protein L11 isoform X1 [Cucumis sativus] >XP_008438243.1 PREDICTED: 60S ribosomal protein L11-like isoform X1 [Cucumis melo] >XP_038886885.1 60S ribosomal protein L11-like isoform X1 [Benincasa hispida] >KAA0049088.1 60S ribosomal protein L11 isoform X1 [Cucumis melo var. makuwa] >TYK17475.1 60S ribosomal protein L11 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 5.9e-85
Identity = 170/211 (80.57%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLI 60
           MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSK       
Sbjct: 1   MAQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKA------ 60

Query: 61  FQSLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAM 120
                                            RYTVRSFGIRRNEKIACYVTVRG+KAM
Sbjct: 61  ---------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAM 120

Query: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 180
           QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR
Sbjct: 121 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYR 172

Query: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE
Sbjct: 181 VGRRRRCKSRVGIQHRVTKEDAMKWFQVKYE 172

[Close]

BLAST of CmoCh19G010480 vs. NCBI nr
Match: VDC68963.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 322.8 bits (826), Expect = 2.3e-84
Identity = 166/208 (79.81%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKG    L+F  
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMFMLLVF-- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                    +  I RYTVRSFGIRRNEKIACYVTVRGDKAMQLL
Sbjct: 62  -------------------------IFIISRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 181

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 182

[Close]

BLAST of CmoCh19G010480 vs. NCBI nr
Match: VDC74519.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 322.0 bits (824), Expect = 3.8e-84
Identity = 166/209 (79.43%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 3   QASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQ 62
           QASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKG    ++F 
Sbjct: 2   QASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMSEHILF- 61

Query: 63  SLDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQL 122
                                     +  I RYTVRSFGIRRNEKIACYVTVRGDKAMQL
Sbjct: 62  -------------------------IVFYISRYTVRSFGIRRNEKIACYVTVRGDKAMQL 121

Query: 123 LESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVG 182
           LESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV 
Sbjct: 122 LESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVA 181

Query: 183 RRRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRRCKTRVGIQHRVTKDDAMKWFQVKYE 184

[Close]

BLAST of CmoCh19G010480 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-85
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKARVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-85
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-85
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-85
Identity = 161/208 (77.40%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQS 63
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK          
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA--------- 61

Query: 64  LDFDSGMVRMKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLL 123
                                         RYTVRSFGIRRNEKIACYVTVRG+KAMQLL
Sbjct: 62  ------------------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLL 121

Query: 124 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGR 183
           ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV R
Sbjct: 122 ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVAR 170

Query: 184 RRRCKSRVGIQHRVTKEDAMKWFQVKYE 212
           RRRCK+RVGIQHRVTK+DAMKWFQVKYE
Sbjct: 182 RRRCKTRVGIQHRVTKDDAMKWFQVKYE 170

[Close]

BLAST of CmoCh19G010480 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 294.7 bits (753), Expect = 6.1e-80
Identity = 152/199 (76.38%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 13  MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGTCFSLIFQSLDFDSGMVR 72
           MRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSK                   
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA------------------ 60

Query: 73  MKIRKSINNEKFSIEPLQSIPRYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEY 132
                                RYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEY
Sbjct: 61  ---------------------RYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY 120

Query: 133 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVG 192
           ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRV RRRRCK+RVG
Sbjct: 121 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVG 160

Query: 193 IQHRVTKEDAMKWFQVKYE 212
           IQHRVTK+DAMKWFQVKYE
Sbjct: 181 IQHRVTKDDAMKWFQVKYE 160

The following BLAST results are available for this feature:

BLAST of CmoCh19G010480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46287	3.6e-85	78.85	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
P42795	8.9e-84	77.40	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	8.9e-84	77.40	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
A2YDY2	2.9e-82	76.92	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	2.9e-82	76.92	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of CmoCh19G010480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKX0	9.9e-86	81.04	60S ribosomal protein L11 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114548...	[more]
A0A5A7U1I5	2.9e-85	80.57	60S ribosomal protein L11 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1D1S0	2.9e-85	80.57	60S ribosomal protein L11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A1S3AVK5	2.9e-85	80.57	60S ribosomal protein L11-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348340...	[more]
A0A3P5Z4G3	1.1e-84	79.81	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA06T27503Z PE=3 SV=...	[more]

BLAST of CmoCh19G010480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952130.1	2.0e-85	81.04	60S ribosomal protein L11 isoform X1 [Cucurbita moschata] >XP_023511698.1 60S ri...	[more]
XP_022148025.1	5.9e-85	80.57	60S ribosomal protein L11 isoform X1 [Momordica charantia]	[more]
XP_004133951.1	5.9e-85	80.57	60S ribosomal protein L11 isoform X1 [Cucumis sativus] >XP_008438243.1 PREDICTED...	[more]
VDC68963.1	2.3e-84	79.81	unnamed protein product [Brassica rapa]	[more]
VDC74519.1	3.8e-84	79.43	unnamed protein product [Brassica rapa]	[more]

BLAST of CmoCh19G010480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	6.3e-85	77.40	ribosomal protein large subunit 16A	[more]
AT3G58700.1	6.3e-85	77.40	Ribosomal L5P family protein	[more]
AT4G18730.1	6.3e-85	77.40	ribosomal protein L16B	[more]
AT5G45775.2	6.3e-85	77.40	Ribosomal L5P family protein	[more]
AT5G45775.1	6.1e-80	76.38	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 2..55 e-value: 6.0E-10 score: 36.7 coord: 85..213 e-value: 4.0E-25 score: 86.2
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 87..211
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 3..54
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 2..213 e-value: 3.0E-65 score: 221.1
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 87..212
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 10..53
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 11..53 e-value: 1.2E-13 score: 51.1
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 107..205 e-value: 1.7E-20 score: 73.0
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 3..54
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 87..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G010480.1	CmoCh19G010480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome