CmoCh19G009230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G009230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Optic atrophy 3 protein (OPA3)
Location	Cmo_Chr19: 8577845 .. 8580406 (+)
RNA-Seq Expression	CmoCh19G009230
Synteny	CmoCh19G009230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACGAATCTCCTTCTGGATTGTTCGGCCTGCGATCGATCCACCCCTCTGCGATTGATTTATTCGATTCCATTTTCCTCTTCTCTAATCGTCTTTCTTCTTCCCCACGCATTATGTTTGCGGAATCGGCTACCCGGTCAATAGTGACCAACTACAACAGTCAACCTTTCTATTTCTTTCCCACGTCTTTAATTTCGACTAGTTCTATGTTGTAGAGCTCGATTCGAGTTTGTGTTAACGTTTTGGAAAGAGGGTGCGTTGGCTAGGAATGATTCTCCCTTTTGTGAAGTTAGGGGCTCTTGCTCTGAAAACCATCTGCAAACCAATCGCCAATCGTCTCAAGAAGGAGGCTGGGTTGCACCCGAAGTTTAGGCAGTACATTATCAACATCGCACAGGTTTTGTAGAATTTCAAGGATTTTCATTTCTTTCAAATGTATTTATGCGATAGTTTGTTTTCTCGTTATGGTTGATACTAGCAGTTATTTATGATATATTTTGCACAACTGTGATGCTTCTGAGAGATGAATTCATTAAGGGAAGTTGTAATTATCTCGAGGGAAATGGCATAGATGGGCCGCGTTCCATGTTTTGTTTTGTTAGTCTGTTTTCTTGGTATGCTTAAAGCTTATATGTCCCATGATTAGTAGCCCTTAGGACTTTTACTGCTATGAAGGTCTGCAGTCTTAGACTCGTGCCAGGCGGTGAATTAAACATGTACGTTAATATTGCTAAGCTTGTGAAATCAGTTGTTTCAAATTTGGTGCAACTCAAGCATTTGAATGCCCTTTTCCCAAATATATTACGGGCCTAGCCTAAGGTTTTTAAAATGCGTATGCTAAGGAGAAATTTTCACGCTCGTTCCTCTCTCCAATTGATGCGGGATCTCACAATCCACCCTCCTTTAGGGCCAGCGTCCTCGCTGGCAATTGTTCCCTTCTCCAATCGATATGGATACAATCCACTCTCCTTCGGGGCTAGCGTCTTTGCTGGCACTCATTTCTCTCTCCAATCGATGTGGAATCTCACATACATGTTACGTCATATACATAGATTAAGTGTTCATAGAATGCAGATAGGTTTATTGCCCATAAGCCCATTCTTCCTTGTGGAATGGATTTTAAGATGTTCTGATCTTGTTCTTTCATATACTGAACCAGGCAAATCATCGGTTTTCAACGAATGTGCAACGAAGAATATATGGTCGTGCAACAGATGCTGCCATAAGGCCCTTGAATGAAGAGAAAGCTGTCCAAGCTGCAGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTAAAATGATTTCTTCTCTCTTTCTCTCTCACTCTTCTTCTTTTAGAAAAATTATCTTAGCATTTGCTGGTTTGTATTCAAGAATCAGTGGTGTTCTCCTACTGGGATATTTGGATTTATAAAATTATATCCAATGGCACGAACATGTTTTCCTTGTTCTTTTAGTGAGATATGATAATGGGCTTAAAAACGTTCTCTTTTGGAGAAGTATATTAGAAGCACCATGTCATCCTATGTGCCATAAAGAATAACTTTAGAGATCCATATACTCATTATCATATTACTCCATTAGAAGTGTATATTTCCCGGTTTTATATCAGCTGTACTCTGCCCATAGGTTGCTGGAGCTGCTGTTATTTTTGAGGTGCAAAGAAATTCGAGATCAGAAGCAAGAAAGGAGGATCTCCGCAGGCAAGAATTGGAGGTATTTGGATTTTTTCTTCTTCCTTCTTTTGTTTTTTTGACATTTTTGAATTCATTGTGGGATAATTTTCAATGATTTTCTTTCCTTTAAATTTATAGTGCTTCTTTTGGTACGACTGTAATTTGTATTCATGAACTTTTTGTAATTTGAAAAATATTTTCACATACATGTTCTTCTGATCTGACTTGAACTTAAAAGTAATGCTTAAGCATACTTTGTTATTCTAAAATATATGTACATGCTTGTAACTATAGGCGATGAAGCAAAGAGATGATGATTTAGCTCGAGAAATAGAAATTCTCAAACAGAAGATCGAAGAACTGGAAAAATTGTCCAAGGGACGAGGTCTAACTGGCTTGTTTCACTTCAGGCATCTGCACACCTCTGAAGCTGAAAAAGAGAAACACCCTTGATCATCAATGACATCAAGTAATCCATTGATTTTGTAACTGAGCATTTTATTATCAGTTGATTGTGATTCAATATTCTTAACAGACGTTGCTAATGAAGGCTTATGCAATTAAAACTTGGAGATCATGGATGAAATTGTTGATATAAGACTCCTCCAGATCTTTGTCAAGGAATAACTCTCTTAACTTCTCACGGTTTGCTCTGATCGCTTTACCAGTTTCATTCTCTTCATCCATCACGGTCTTCACTGCCTTACACACACTTTCTTTTGTAAAAAATCCATCTTCTTCCCTTTTCTCCACCTCCACACCAACCTTCAAATGGCTGCTCATCGTTCTTGCTCGAAAAATGTGGTCGCCAACATGAGGCAACAATACTAACTGACATTTCTTCACCAATGCCTCAGATAAGGACCCTGCCCCACAATGTGTAAC

mRNA sequence

GAACGAATCTCCTTCTGGATTGTTCGGCCTGCGATCGATCCACCCCTCTGCGATTGATTTATTCGATTCCATTTTCCTCTTCTCTAATCGTCTTTCTTCTTCCCCACGCATTATGTTTGCGGAATCGGCTACCCGGTCAATAGTGACCAACTACAACAGTCAACCTTTCTATTTCTTTCCCACGTCTTTAATTTCGACTAGTTCTATGTTGTAGAGCTCGATTCGAGTTTGTGTTAACGTTTTGGAAAGAGGGTGCGTTGGCTAGGAATGATTCTCCCTTTTGTGAAGTTAGGGGCTCTTGCTCTGAAAACCATCTGCAAACCAATCGCCAATCGTCTCAAGAAGGAGGCTGGGTTGCACCCGAAGTTTAGGCAGTACATTATCAACATCGCACAGGCAAATCATCGGTTTTCAACGAATGTGCAACGAAGAATATATGGTCGTGCAACAGATGCTGCCATAAGGCCCTTGAATGAAGAGAAAGCTGTCCAAGCTGCAGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTTGCTGGAGCTGCTGTTATTTTTGAGGTGCAAAGAAATTCGAGATCAGAAGCAAGAAAGGAGGATCTCCGCAGGCAAGAATTGGAGGCGATGAAGCAAAGAGATGATGATTTAGCTCGAGAAATAGAAATTCTCAAACAGAAGATCGAAGAACTGGAAAAATTGTCCAAGGGACGAGGTCTAACTGGCTTGTTTCACTTCAGGCATCTGCACACCTCTGAAGCTGAAAAAGAGAAACACCCTTGATCATCAATGACATCAAGTAATCCATTGATTTTGTAACTGAGCATTTTATTATCAGTTGATTGTGATTCAATATTCTTAACAGACGTTGCTAATGAAGGCTTATGCAATTAAAACTTGGAGATCATGGATGAAATTGTTGATATAAGACTCCTCCAGATCTTTGTCAAGGAATAACTCTCTTAACTTCTCACGGTTTGCTCTGATCGCTTTACCAGTTTCATTCTCTTCATCCATCACGGTCTTCACTGCCTTACACACACTTTCTTTTGTAAAAAATCCATCTTCTTCCCTTTTCTCCACCTCCACACCAACCTTCAAATGGCTGCTCATCGTTCTTGCTCGAAAAATGTGGTCGCCAACATGAGGCAACAATACTAACTGACATTTCTTCACCAATGCCTCAGATAAGGACCCTGCCCCACAATGTGTAAC

Coding sequence (CDS)

ATGATTCTCCCTTTTGTGAAGTTAGGGGCTCTTGCTCTGAAAACCATCTGCAAACCAATCGCCAATCGTCTCAAGAAGGAGGCTGGGTTGCACCCGAAGTTTAGGCAGTACATTATCAACATCGCACAGGCAAATCATCGGTTTTCAACGAATGTGCAACGAAGAATATATGGTCGTGCAACAGATGCTGCCATAAGGCCCTTGAATGAAGAGAAAGCTGTCCAAGCTGCAGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTTGCTGGAGCTGCTGTTATTTTTGAGGTGCAAAGAAATTCGAGATCAGAAGCAAGAAAGGAGGATCTCCGCAGGCAAGAATTGGAGGCGATGAAGCAAAGAGATGATGATTTAGCTCGAGAAATAGAAATTCTCAAACAGAAGATCGAAGAACTGGAAAAATTGTCCAAGGGACGAGGTCTAACTGGCTTGTTTCACTTCAGGCATCTGCACACCTCTGAAGCTGAAAAAGAGAAACACCCTTGA

Protein sequence

MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP

Homology

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BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot
Match: Q9P7W0 (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 6   VKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFS---TNVQRRIYGRATD 65
           +K+G+L ++T+ KPIAN +K +A  H  FR+  I  AQ  HR     T + R   G A +
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGA-N 65

Query: 66  AAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQR 125
             +RPLN+ KAV A A  L E F+FTVAG A++FE  R  R E  + D   +  EA+   
Sbjct: 66  VRLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARRKEKNRRD---EVAEAILGL 125

Query: 126 DDDLAREIEILKQK 137
             ++ R  EI++++
Sbjct: 126 QHEIVRINEIMEKQ 135

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BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot
Match: Q1L9A2 (Optic atrophy 3 protein homolog OS=Danio rerio OX=7955 GN=opa3 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 4   PFVKLGALALKTICKPIANRLKKEAGLHPKFRQYI-INIAQANHRFSTNVQRRIYGRATD 63
           P  KL  L ++ + KP+ANR+K  A     F+ YI +  AQA H      + RI G    
Sbjct: 7   PIAKLLYLGVRQLSKPVANRIKAGARRSEFFKNYICLPPAQAYHWIEMRTKMRIMG-FRG 66

Query: 64  AAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQR 123
           + I+PLNE+ A +  A+LLGE  +F + G  ++ E  R + +  RKE+   Q + +++ +
Sbjct: 67  STIKPLNEDAAAELGAELLGEAIIFVIGGGCMVLEYSRQAANSRRKEEELAQSITSLQTQ 126

Query: 124 DDDLAREIEILKQKIEELEKL 144
             +LA   E L  +I E+ +L
Sbjct: 127 LGELALTTETLDAQIREVNRL 146

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BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot
Match: Q641S2 (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.0e-11
Identity = 49/149 (32.89%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 4   PFVKLGALALKTICKPIANRLKKEAGLHPKFRQYI-INIAQANHRFSTNVQRRIYGRATD 63
           P  KL  L ++ I KP+ANR+K  A     FR Y+ +  AQ  H      + RI G    
Sbjct: 7   PIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRIMG-FRG 66

Query: 64  AAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQR 123
           A I+PLNE+ A +  A+LLGE  +F + G  ++ E  R S +  RKE+     L +M   
Sbjct: 67  AVIKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEEEMEARLGSM--- 126

Query: 124 DDDLAREIEILKQKIEELEKLSKGRGLTG 152
           + ++AR + +L +++E   ++++ + L G
Sbjct: 127 EAEIAR-LGLLTEELETRARVTERQQLAG 150

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BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot
Match: Q05B66 (Optic atrophy 3 protein homolog OS=Bos taurus OX=9913 GN=OPA3 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 4   PFVKLGALALKTICKPIANRLKKEAGLHPKFRQYI-INIAQANHRFSTNVQRRIYGRATD 63
           P  KL  L ++ + KP+ANR+K+ A     F+ YI +  AQ  H      + R+ G   +
Sbjct: 7   PMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRAKMRLMGFNAE 66

Query: 64  AAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQR 123
             I+PLNEE A +  A+LLGE  +F VA   ++ E  R    + RKE  +    +AM+  
Sbjct: 67  -TIKPLNEEAAAELGAELLGEATIFLVACGCLVLEYSRQKTQQRRKEGEQLAAWDAMRDE 126

Query: 124 DDDLAREIEILKQKIE 139
            D LA  +E L+ +++
Sbjct: 127 VDHLALVLEALQAQVQ 141

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BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot
Match: Q9H6K4 (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 4   PFVKLGALALKTICKPIANRLKKEAGLHPKFRQYI-INIAQANHRFSTNVQRRIYG-RAT 63
           P  KL  L ++ + KP+ANR+K+ A     F+ YI +  AQ  H      + RI G R T
Sbjct: 7   PMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGFRGT 66

Query: 64  DAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMKQ 123
              I+PLNEE A +  A+LLGE  +F V G  ++ E  R+   +  KE+ +R    A++ 
Sbjct: 67  --VIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALRD 126

Query: 124 RDDDLAREIEILKQKIE 139
               LA  +E L+ +++
Sbjct: 127 EVGHLALALEALQAQVQ 141

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BLAST of CmoCh19G009230 vs. ExPASy TrEMBL
Match: A0A6J1GLF1 (OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455053 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.5e-84
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 170
           QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 169

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BLAST of CmoCh19G009230 vs. ExPASy TrEMBL
Match: A0A6J1HVW8 (OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468327 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.4e-81
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKE+LRRQELEAMK
Sbjct: 61  TDTAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 170
           QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRH H SEA KEKHP
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHPHASEAGKEKHP 169

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BLAST of CmoCh19G009230 vs. ExPASy TrEMBL
Match: A0A6J1C2A4 (OPA3-like protein OS=Momordica charantia OX=3673 GN=LOC111007808 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 152/168 (90.48%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IIN+AQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINVAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR+SRSEARKE+LRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKH 169
           QRDDD+AREIEILKQK+EELE+LSKGRG+T +FHFRH HTSEAEK KH
Sbjct: 121 QRDDDIAREIEILKQKVEELEQLSKGRGVTSIFHFRHPHTSEAEKAKH 168

[Close]

BLAST of CmoCh19G009230 vs. ExPASy TrEMBL
Match: A0A0A0K203 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041290 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.9e-74
Identity = 151/168 (89.88%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILP VKLGALALKTICKPIANRLKKEAGLHPKFRQ IIN AQANHRFSTNVQRRIYG A
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQR+SRSEARKE+LRRQELEAMK
Sbjct: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKH 169
           QRDDD+AREIEILKQKIE LE+LSKGRGLTGLFHFRH HT+E E  KH
Sbjct: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKH 168

[Close]

BLAST of CmoCh19G009230 vs. ExPASy TrEMBL
Match: A0A1S3C296 (OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103495636 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.9e-73
Identity = 151/168 (89.88%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILP VKLGALALKTICKPIANRLKKEAGLHPKFRQ IINIAQANHRFSTNVQRRIYG A
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINIAQANHRFSTNVQRRIYGYA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           T+ AI PLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR+SRSEARKE+LRRQELEAMK
Sbjct: 61  TNVAIPPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKH 169
           QRDD +AREIEILKQKIE LE+LSKGRGLTGLFHFRH HT+E E  KH
Sbjct: 121 QRDDGIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTAEGENVKH 168

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BLAST of CmoCh19G009230 vs. NCBI nr
Match: XP_022952344.1 (OPA3-like protein [Cucurbita moschata])

HSP 1 Score: 321.2 bits (822), Expect = 5.2e-84
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 170
           QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 169

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BLAST of CmoCh19G009230 vs. NCBI nr
Match: KAG6572274.1 (hypothetical protein SDJN03_29002, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKE+LRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 170
           QRDDDLAREIEI KQKIEELEKLSKGR LTGLFHFRH HTSEAEKEKHP
Sbjct: 121 QRDDDLAREIEIFKQKIEELEKLSKGRSLTGLFHFRHPHTSEAEKEKHP 169

[Close]

BLAST of CmoCh19G009230 vs. NCBI nr
Match: XP_023554627.1 (optic atrophy 3 protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 7.0e-81
Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYG A
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGHA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKE+LRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKH 169
           QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRH HTSEAE+EKH
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHPHTSEAEREKH 168

[Close]

BLAST of CmoCh19G009230 vs. NCBI nr
Match: XP_022969272.1 (OPA3-like protein [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 7.0e-81
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKE+LRRQELEAMK
Sbjct: 61  TDTAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKHP 170
           QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRH H SEA KEKHP
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHPHASEAGKEKHP 169

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BLAST of CmoCh19G009230 vs. NCBI nr
Match: KAG7036556.1 (hypothetical protein SDJN02_00175 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKE+LRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHLHTSEAEKEKH 169
           QRDDDLAREIEI KQKIEELEKLSKGR LTGLFHFRH HTSEAE+EKH
Sbjct: 121 QRDDDLAREIEIFKQKIEELEKLSKGRSLTGLFHFRHPHTSEAEREKH 168

[Close]

BLAST of CmoCh19G009230 vs. TAIR 10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3) )

HSP 1 Score: 195.3 bits (495), Expect = 4.0e-50
Identity = 97/156 (62.18%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           M+LP +KLG LA+KTI KP+A++LK +A +HPKFRQ IIN AQ NHR +T +QRRIYG A
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHA 60

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TD  IRPL+EEKAVQAA DL+GE+F+F V GA V+FEVQR+SRSEARKE+ R+QELE ++
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQELEELR 120

Query: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFR 157
            +D++L +++  LK K+EELE+L+K RGL+G+F  +
Sbjct: 121 IKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLK 156

[Close]

BLAST of CmoCh19G009230 vs. TAIR 10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3) )

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 108/184 (58.70%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60
           M+LP +KLG LAL+TICKPIAN+LKKEAG++PKFRQ+IINIAQANHRF+T +QRR  GR 
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRI 71

Query: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEDLRRQELEAMK 120
           TDA IRPLNEE+AVQAAADLLGELF FTVAGAA+++EVQRN+R EA+KE+ R+QEL   +
Sbjct: 72  TDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFR 131

Query: 121 QRDDDLAREIEILKQKI----EEL-------------EKLSKGRGLTGLFHFRHLHTSEA 168
           ++ + +  EIE +KQ+     EEL             E++SK RGL  L+++   + + A
Sbjct: 132 RKHEKMENEIEEMKQRCCLLHEELSKPINEQPSKPLNEEVSKPRGLAWLYNYM-CYQNAA 191

The following BLAST results are available for this feature:

BLAST of CmoCh19G009230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9P7W0	1.0e-13	38.81	OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848...	[more]
Q1L9A2	4.2e-12	33.33	Optic atrophy 3 protein homolog OS=Danio rerio OX=7955 GN=opa3 PE=3 SV=1	[more]
Q641S2	8.0e-11	32.89	Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1	[more]
Q05B66	1.0e-10	33.82	Optic atrophy 3 protein homolog OS=Bos taurus OX=9913 GN=OPA3 PE=2 SV=1	[more]
Q9H6K4	1.0e-10	34.31	Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1	[more]

BLAST of CmoCh19G009230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLF1	2.5e-84	100.00	OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455053 PE=3 SV=1	[more]
A0A6J1HVW8	3.4e-81	97.04	OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111468327 PE=3 SV=1	[more]
A0A6J1C2A4	1.3e-75	90.48	OPA3-like protein OS=Momordica charantia OX=3673 GN=LOC111007808 PE=3 SV=1	[more]
A0A0A0K203	6.9e-74	89.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041290 PE=3 SV=1	[more]
A0A1S3C296	9.9e-73	89.88	OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103495636 PE=3 SV=1	[more]

BLAST of CmoCh19G009230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952344.1	5.2e-84	100.00	OPA3-like protein [Cucurbita moschata]	[more]
KAG6572274.1	1.4e-81	97.63	hypothetical protein SDJN03_29002, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554627.1	7.0e-81	97.62	optic atrophy 3 protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022969272.1	7.0e-81	97.04	OPA3-like protein [Cucurbita maxima]	[more]
KAG7036556.1	2.7e-80	97.02	hypothetical protein SDJN02_00175 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh19G009230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28510.1	4.0e-50	62.18	Optic atrophy 3 protein (OPA3)	[more]
AT3G58150.1	3.4e-49	58.70	Optic atrophy 3 protein (OPA3)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	PANTHER	PTHR12499:SF10	OPTIC ATROPHY 3 PROTEIN	coord: 1..167
IPR010754	Optic atrophy 3-like	PFAM	PF07047	OPA3	coord: 3..125 e-value: 7.3E-42 score: 142.1
IPR010754	Optic atrophy 3-like	PANTHER	PTHR12499	OPTIC ATROPHY 3 PROTEIN OPA3	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G009230.1	CmoCh19G009230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019216	regulation of lipid metabolic process
cellular_component	GO:0005739	mitochondrion