CmoCh19G007180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G007180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR21-like
Location	Cmo_Chr19: 7510929 .. 7511186 (-)
RNA-Seq Expression	CmoCh19G007180
Synteny	CmoCh19G007180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

mRNA sequence

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

Coding sequence (CDS)

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

Protein sequence

MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

Homology

[Close]

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.4e-26
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 10 RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC 69
          R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC
Sbjct: 16 RSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPC 75

Query: 70 NEDVFFEVTSRL 82
           ED F  VTSRL
Sbjct: 76 PEDTFINVTSRL 87

[Close]

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.5e-26
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.8e-26
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSR 81
          GLTIPC ED F  VTSR
Sbjct: 72 GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-25
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMG
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC+ED F  VTSRL
Sbjct: 72 GLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-25
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL
Match: A0A6J1HY12 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111468496 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRLAANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRLAANC 85

[Close]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL
Match: A0A6J1GL96 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111454990 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRLAANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRLAANC 85

[Close]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL
Match: A0A0A0K4I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008440 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.3e-40
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL
Match: A0A6J1C3M2 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111007637 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.5e-40
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISFLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLA 83
          PMGGLTIPCNEDVFFEVTSRLA
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRLA 82

[Close]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL
Match: A0A5D3CP52 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001290 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVF +VTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFLKVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: XP_022952260.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022969521.1 auxin-responsive protein SAUR21-like [Cucurbita maxima] >XP_023554332.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.2e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRLAANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRLAANC 85

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: XP_011658572.1 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43197.1 hypothetical protein Csa_020466 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: XP_022135747.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 2.0e-39
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISFLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLA 83
          PMGGLTIPCNEDVFFEVTSRLA
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRLA 82

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: XP_008448012.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0049686.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12186.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-38
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVF +VTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFLKVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: KAG2335211.1 (hypothetical protein Bca52824_006391 [Brassica carinata])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 10 RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC 69
          RK++S  PKGF AVYVGE+QK+R+V+PISYL  PSFQDLLSK+EEEFGFDHPMGGLTIPC
Sbjct: 20 RKANSAAPKGFLAVYVGESQKKRYVVPISYLSQPSFQDLLSKSEEEFGFDHPMGGLTIPC 79

Query: 70 NEDVFFEVTSRL 82
           ED+F  VTSRL
Sbjct: 80 PEDIFINVTSRL 91

[Close]

BLAST of CmoCh19G007180 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-27
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 10 RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC 69
          R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC
Sbjct: 16 RSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPC 75

Query: 70 NEDVFFEVTSRL 82
           ED F  VTSRL
Sbjct: 76 PEDTFINVTSRL 87

[Close]

BLAST of CmoCh19G007180 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 5.3e-27
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 7.0e-27
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSR 81
          GLTIPC ED F  VTSR
Sbjct: 72 GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh19G007180 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 9.1e-27
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMG
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC+ED F  VTSRL
Sbjct: 72 GLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-26
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

The following BLAST results are available for this feature:

BLAST of CmoCh19G007180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	4.4e-26	72.22	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	7.5e-26	65.38	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	9.8e-26	66.23	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.3e-25	64.10	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF6	2.2e-25	65.38	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of CmoCh19G007180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY12	2.0e-42	100.00	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111468496...	[more]
A0A6J1GL96	2.0e-42	100.00	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114549...	[more]
A0A0A0K4I7	7.3e-40	97.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008440 PE=3 SV=1	[more]
A0A6J1C3M2	9.5e-40	98.78	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3CP52	1.1e-38	95.29	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CmoCh19G007180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952260.1	4.2e-42	100.00	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022969521.1 auxin-...	[more]
XP_011658572.1	1.5e-39	97.65	auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43197.1 hypothetical prote...	[more]
XP_022135747.1	2.0e-39	98.78	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_008448012.1	2.2e-38	95.29	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0049686.1 aux...	[more]
KAG2335211.1	1.2e-25	77.78	hypothetical protein Bca52824_006391 [Brassica carinata]	[more]

BLAST of CmoCh19G007180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18030.1	3.1e-27	72.22	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.3e-27	65.38	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	7.0e-27	66.23	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.1e-27	64.10	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.6e-26	65.38	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 10..80 e-value: 4.0E-25 score: 87.8
None	No IPR available	PANTHER	PTHR31929:SF80	SUBFAMILY NOT NAMED	coord: 12..81
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 12..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G007180.1	CmoCh19G007180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin