CmoCh19G005120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G005120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CYSTM domain-containing protein
Location	Cmo_Chr19: 6051166 .. 6051991 (-)
RNA-Seq Expression	CmoCh19G005120
Synteny	CmoCh19G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCAAAAGTGGATTAGCTTAGCCCATAAACACACAAACGAGAACTCTCTAGATGCTCCACTTTTCCAACTGCTCCTTTCTTCTTCAATACAACTAGAATTTTTCCTTTTTATTGTCAAAAACACACGAGCAAATAGTGATAAAACAAAGAGAATCCCATAAACTCCATATCTTCTTCTTAAATACCTTCTTCTTCTCTTCATTTAAGCTCGTGTTGATCCGAAGATATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGTATTACTAGTTGTTATCTGTTGAGCTATGCTTAAATTGATTGCTTTCTGGGTCTCGTTTGATTTAGCGATTTGGATGATGTGATCTATTCACAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGGTACGTCAAAAAGGTTTGTTGTTTGTTGAATGGTTTAGGGTTAGAATTTGGCTAACAAAGGGTTTAACTTTGTGTGATGCAGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGATATGAGCTTTGCTTGCCTAATTTGTAGCTGTGAAATGGGTTATGTTCTTCTACCTTCTTTGGGAGTGGGTTTGAGTTTGTGTAAACTTTGGAAAGAATATTGTTGATTGGTGTCTAGAATAAAGCTTTGTTTTGATGTGAAGTGTAGAGTTTAATTACGAAAGTTGTGAAATTTGTCGATCGTTTTGACTTTTCGACTAAAAAATTTGAGGTTAAAC

mRNA sequence

TCTTCAAAAGTGGATTAGCTTAGCCCATAAACACACAAACGAGAACTCTCTAGATGCTCCACTTTTCCAACTGCTCCTTTCTTCTTCAATACAACTAGAATTTTTCCTTTTTATTGTCAAAAACACACGAGCAAATAGTGATAAAACAAAGAGAATCCCATAAACTCCATATCTTCTTCTTAAATACCTTCTTCTTCTCTTCATTTAAGCTCGTGTTGATCCGAAGATATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGATATGAGCTTTGCTTGCCTAATTTGTAGCTGTGAAATGGGTTATGTTCTTCTACCTTCTTTGGGAGTGGGTTTGAGTTTGTGTAAACTTTGGAAAGAATATTGTTGATTGGTGTCTAGAATAAAGCTTTGTTTTGATGTGAAGTGTAGAGTTTAATTACGAAAGTTGTGAAATTTGTCGATCGTTTTGACTTTTCGACTAAAAAATTTGAGGTTAAAC

Coding sequence (CDS)

ATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGA

Protein sequence

MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSILLVT

Homology

[Close]

BLAST of CmoCh19G005120 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-08
Identity = 38/63 (60.32%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 4  PKYAYP---YPP---PPGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLL 58
          PK  YP   YPP   PP GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

[Close]

BLAST of CmoCh19G005120 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-07
Identity = 40/75 (53.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 4  PKYAYP---YPP--------PPGGY------YQGPPVMAPPQYAAPPPKRQ----PGFLE 58
          PK AYP   YPP        PP GY       QG P    PQY  PP  +Q    PGFLE
Sbjct: 23 PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLE 82

[Close]

BLAST of CmoCh19G005120 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04
Identity = 34/79 (43.04%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 4   PKYAYPYP---------PPPGGY-----------YQGPPVMAPPQYAAPPPKRQ-----P 58
           PK AYP P         PPP GY            QG P    PQ   PP ++Q     P
Sbjct: 22  PKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPEQGYPQQGYPPQQQQQQKHSP 81

[Close]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL
Match: B9SMJ5 (CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSILLVT 68
          PSI+ V+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL
Match: A0A1U8A0R0 (uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-25
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1   MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
           MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 92  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 151

Query: 61  PSILLVT 68
           PSI+ V+
Sbjct: 152 PSIIFVS 156

[Close]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL
Match: A0A2P5FH35 (Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_071570 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.2e-25
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSILLVT 68
          PSI+ ++
Sbjct: 61 PSIIFIS 65

[Close]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL
Match: A0A2C9UQL9 (CYSTM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G104200 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.8e-25
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSILLVT 68
          PSI+ V+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL
Match: A0A061DHF5 (CYSTM domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_000918 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.9e-25
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPPKR PGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPKRGPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSILLVT 68
          PSI+ V+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of CmoCh19G005120 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.4 bits (363), Expect = 3.5e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSILLVT 68
          PSILLVT
Sbjct: 61 PSILLVT 67

[Close]

BLAST of CmoCh19G005120 vs. NCBI nr
Match: KAF9609677.1 (hypothetical protein IFM89_017856 [Coptis chinensis])

HSP 1 Score: 127.9 bits (320), Expect = 3.3e-26
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          M+DPKYAYPYP P  GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MNDPKYAYPYPYPAQGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSILLV 67
          PSI+ V
Sbjct: 61 PSIIFV 66

[Close]

BLAST of CmoCh19G005120 vs. NCBI nr
Match: EEF35140.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 123.6 bits (309), Expect = 6.3e-25
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSILLVT 68
          PSI+ V+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of CmoCh19G005120 vs. NCBI nr
Match: XP_010254642.1 (PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera])

HSP 1 Score: 123.2 bits (308), Expect = 8.2e-25
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1   MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
           MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 92  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 151

Query: 61  PSILLVT 68
           PSI+ V+
Sbjct: 152 PSIIFVS 156

[Close]

BLAST of CmoCh19G005120 vs. NCBI nr
Match: DAD40851.1 (TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera])

HSP 1 Score: 123.2 bits (308), Expect = 8.2e-25
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSILLVT 68
          PSI+ V+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of CmoCh19G005120 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-18
Identity = 49/74 (66.22%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 1  MSDPKYAYPYPPPPGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGCLAALCC 60
          MSDPKYAYPY P PG Y QG  PPV  PPQY          PPP R+ GFLEG LAALCC
Sbjct: 1  MSDPKYAYPY-PAPGNYPQGPPPPVGVPPQYYPPPPPPPPPPPPPRKVGFLEGLLAALCC 60

Query: 61 CCLLDECCCDPSIL 65
          CCL+DECCCDP+I+
Sbjct: 61 CCLVDECCCDPTII 73

[Close]

BLAST of CmoCh19G005120 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-09
Identity = 38/63 (60.32%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 4  PKYAYP---YPP---PPGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLL 58
          PK  YP   YPP   PP GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

[Close]

BLAST of CmoCh19G005120 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 40/75 (53.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 4  PKYAYP---YPP--------PPGGY------YQGPPVMAPPQYAAPPPKRQ----PGFLE 58
          PK AYP   YPP        PP GY       QG P    PQY  PP  +Q    PGFLE
Sbjct: 23 PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLE 82

[Close]

BLAST of CmoCh19G005120 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 7.0e-06
Identity = 30/60 (50.00%), Postives = 33/60 (55.00%), Query Frame = 0


Query: 4   PKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQP------GFLEGCLAALCCCCLLDEC 58
           P   YP   PP   YQGPP   PP Y   PPK +       GF+EGCLA LCCC LL+ C
Sbjct: 67  PPPQYPQGHPPQYPYQGPP---PPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEAC 123

[Close]

BLAST of CmoCh19G005120 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.3e-04
Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 7  AYPYPPPPGGYYQGPPVMAPP----QYAAPPP----KRQPGFLEGCLAALCCCCLLDEC 58
          AYP PP   G Y  PP +  P     +A   P     +  GFL+GCLAA+CCCC+LD C
Sbjct: 12 AYPTPPVSTGPYMTPPPLGYPTSDISHATVAPVETKSKGDGFLKGCLAAMCCCCVLDAC 70

The following BLAST results are available for this feature:

BLAST of CmoCh19G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW3	3.3e-08	60.32	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8S8M0	2.1e-07	53.33	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q8LCL8	8.3e-04	43.04	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]

BLAST of CmoCh19G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9SMJ5	3.1e-25	86.57	CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3...	[more]
A0A1U8A0R0	4.0e-25	86.57	uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564...	[more]
A0A2P5FH35	5.2e-25	85.07	Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale O...	[more]
A0A2C9UQL9	6.8e-25	85.07	CYSTM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G104200 ...	[more]
A0A061DHF5	8.9e-25	86.57	CYSTM domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_000918 PE=3 SV...	[more]

BLAST of CmoCh19G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571885.1	3.5e-31	100.00	hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF9609677.1	3.3e-26	89.39	hypothetical protein IFM89_017856 [Coptis chinensis]	[more]
EEF35140.1	6.3e-25	86.57	conserved hypothetical protein [Ricinus communis]	[more]
XP_010254642.1	8.2e-25	86.57	PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera]	[more]
DAD40851.1	8.2e-25	86.57	TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera]	[more]

BLAST of CmoCh19G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33660.1	1.6e-18	66.22	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G67600.1	2.3e-09	60.32	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT2G41420.1	1.5e-08	53.33	proline-rich family protein	[more]
AT3G49845.1	7.0e-06	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G32190.1	1.3e-04	45.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 12..58 e-value: 2.8E-15 score: 56.3
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..66
None	No IPR available	PANTHER	PTHR31568:SF105	CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-LIKE	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005120.1	CmoCh19G005120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane