CmoCh19G002570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AT-hook motif nuclear-localized protein
Location	Cmo_Chr19: 1873601 .. 1874377 (-)
RNA-Seq Expression	CmoCh19G002570
Synteny	CmoCh19G002570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCTCCTCCACCCGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCAGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTTGATAGCATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGCGGAATGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCGGCTCCTCCCGGCACCACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGTGGTAACGTTGTCGGAGAATTGATGGCAGCCGGGCCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATATGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAACCCATTTCCAGATCCATCTTCAGGGCTTCAGTTCTTCAATTTGCCTGTAAATATGCAGAATCAAATTCAGCTACCATTCTGA

mRNA sequence

ATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCTCCTCCACCCGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCAGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTTGATAGCATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGCGGAATGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCGGCTCCTCCCGGCACCACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGTGGTAACGTTGTCGGAGAATTGATGGCAGCCGGGCCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATATGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAACCCATTTCCAGATCCATCTTCAGGGCTTCAGTTCTTCAATTTGCCTGTAAATATGCAGAATCAAATTCAGCTACCATTCTGA

Coding sequence (CDS)

ATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCTCCTCCACCCGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCAGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTTGATAGCATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGCGGAATGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCGGCTCCTCCCGGCACCACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGTGGTAACGTTGTCGGAGAATTGATGGCAGCCGGGCCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATATGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAACCCATTTCCAGATCCATCTTCAGGGCTTCAGTTCTTCAATTTGCCTGTAAATATGCAGAATCAAATTCAGCTACCATTCTGA

Protein sequence

MAGLDLSNHYIHQLQRPDFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPSSGLQFFNLPVNMQNQIQLPF

Homology

[Close]

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.0e-78
Identity = 173/290 (59.66%), Postives = 200/290 (68.97%), Query Frame = 0


Query: 1   MAGLDLSN--HYI-HQLQRPDFNHHQHHHHHQPPPPPPPDSQSCH------DTESHHLAT 60
           MAGLDL     Y+ HQL RPD     H HH+       P +   H      D  ++H   
Sbjct: 1   MAGLDLGTAFRYVNHQLHRPDL----HLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGL 60

Query: 61  D--------------------TVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEI 120
           D                     V  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+
Sbjct: 61  DLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEV 120

Query: 121 GGGCDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSF 180
             GCDVFD +A+YARRRQRGIC+LSGSG VTNV++RQP+AAG+V+TLQG FEILSL+GSF
Sbjct: 121 TNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSF 180

Query: 181 LPPPAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQ 240
           LPPPAPPG TSLTI+LAGGQGQVVGG+VVGEL AAGPV VI ASFTNVAYERLPLE++EQ
Sbjct: 181 LPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQ 240

Query: 241 EQEQEQDQVQMQPPTSHGNNNPFPDPSS----GLQFFNLPVNMQNQIQLP 258
           +Q+            S+G  N FP+ ++    GL FFNLP+NMQ  +QLP
Sbjct: 241 QQQLGGG--------SNGGGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLP 278

[Close]

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.8e-73
Identity = 160/287 (55.75%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 1   MAGLDL--SNHYIHQL------QRPDFNHHQ-------HHHHHQPPPPPPPDSQSCHDTE 60
           MAGLDL  ++ Y+H +      Q    NHH+       +HHHH             H   
Sbjct: 1   MAGLDLGTTSRYVHNVDGGGGGQFTTDNHHEDDGGAGGNHHHH-------------HHNH 60

Query: 61  SHHLATDTVAS-------------------RRPRGRPPGSKNKPKPPVIITRESANTLRA 120
           +HH   D +AS                   RRPRGRP GSKNKPKPPVI+TRESANTLRA
Sbjct: 61  NHHQGLDLIASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRA 120

Query: 121 HILEIGGGCDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILS 180
           HILE+G GCDVF+ I++YARRRQRGIC+LSG+G VTNV++RQPTAAG+V+TL+G FEILS
Sbjct: 121 HILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILS 180

Query: 181 LTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPL 240
           L+GSFLPPPAPPG TSLTI+LAG QGQVVGGNVVGELMAAGPV V+ ASFTNVAYERLPL
Sbjct: 181 LSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPL 240

Query: 241 EDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPS---SGLQFFNLPVNM 251
           ++ E+          +Q     G  N + + +    GL FFNLP++M
Sbjct: 241 DEHEE---------HLQSGGGGGGGNMYSEATGGGGGLPFFNLPMSM 265

[Close]

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.9e-60
Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 52  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 111
           D   +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG
Sbjct: 100 DHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRG 159

Query: 112 ICILSGSGMVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLA 171
           +C++SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP  T L++YLA
Sbjct: 160 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 219

Query: 172 GGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 213
           GGQGQVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE++E +
Sbjct: 220 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 0


Query: 56  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 115
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 116 SGSGMVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQV 175
           SG+G VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP  T L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 176 VGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPF 235
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE++E      Q  VQ       G     
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEM-----QTPVQGGGGGGGGGGGMG 296

Query: 236 PDPSSGLQ--------FFNLPVNMQNQIQLP 258
             P  G Q           LP N+   +QLP
Sbjct: 297 SPPMMGQQQAMAAMAAAQGLPPNLLGSVQLP 322

[Close]

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.6e-58
Identity = 139/283 (49.12%), Postives = 175/283 (61.84%), Query Frame = 0


Query: 3   GLDLSNHYIHQLQRP-----DFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASR 62
           G D+  H I  L+R      D N H      Q  P    +S      ++H        +R
Sbjct: 37  GHDIDQHRIGGLKRDRDADIDPNEHSSAGKDQSTPGSGGESGGGGGGDNH-------ITR 96

Query: 63  RPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSG 122
           RPRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRGIC+LSG
Sbjct: 97  RPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSG 156

Query: 123 SGMVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQ 182
           +G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP  + LTIYLAGGQGQ
Sbjct: 157 NGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQ 216

Query: 183 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE------------------- 242
           VVGG+VVG LMA+GPV ++ ASF N AYERLPLE+++QE++                   
Sbjct: 217 VVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNIDGNATMGGGT 276

Query: 243 QEQDQVQMQPPTSHGNNNPFPDPSSGLQFFNLPVNMQNQIQLP 258
           Q Q Q Q Q            DP+S +Q   LP N+ N +QLP
Sbjct: 277 QTQTQTQQQQ-----QQQLMQDPTSFIQ--GLPPNLMNSVQLP 305

[Close]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL
Match: A0A6J1HFD9 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111463806 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.4e-142
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MAGLDLSNHYIHQLQRPDFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPR 60
           MAGLDLSNHYIHQLQRPDFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPR
Sbjct: 1   MAGLDLSNHYIHQLQRPDFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPR 60

Query: 61  GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGM 120
           GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGM
Sbjct: 61  GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGM 120

Query: 121 VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVV 180
           VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVV
Sbjct: 121 VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVV 180

Query: 181 GELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPSSG 240
           GELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPSSG
Sbjct: 181 GELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPSSG 240

Query: 241 LQFFNLPVNMQNQIQLPF 259
           LQFFNLPVNMQNQIQLPF
Sbjct: 241 LQFFNLPVNMQNQIQLPF 258

[Close]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL
Match: A0A6J1HQT4 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111466969 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.8e-135
Identity = 249/260 (95.77%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MAGLDLSNHYIHQLQRPDFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPR 60
           MAGLDLSNHYIHQLQRPDFNHH HHHHHQPPPPPPPDSQSCHDTESHH +TD VASRRPR
Sbjct: 1   MAGLDLSNHYIHQLQRPDFNHH-HHHHHQPPPPPPPDSQSCHDTESHHPSTDMVASRRPR 60

Query: 61  GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGM 120
           GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSG+G 
Sbjct: 61  GRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGTGT 120

Query: 121 VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVV 180
           VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPG TSLTIYLAGGQGQVVGGNV+
Sbjct: 121 VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVI 180

Query: 181 GELMAAGPVTVITASFTNVAYERLPLEDE--EQEQEQEQDQVQMQPPTSHGNNNPFPDPS 240
           GELMAAGPVTVITASFTNVAYERLPLEDE  EQEQEQEQDQ+QMQPPTSHGNNNPFPDPS
Sbjct: 181 GELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQEQDQIQMQPPTSHGNNNPFPDPS 240

Query: 241 SGLQFFNLPVNMQNQIQLPF 259
           SGLQFFNLPVNMQNQIQLPF
Sbjct: 241 SGLQFFNLPVNMQNQIQLPF 259

[Close]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL
Match: A0A5A7T556 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004370 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.7e-109
Identity = 219/281 (77.94%), Postives = 231/281 (82.21%), Query Frame = 0


Query: 1   MAGLDLSNHYIHQLQRPDFN---HHQHHHHHQPPPPPPPDSQSCHDTES--HH------- 60
           MAGLDL N YIHQLQ P+FN   HH HHHH        PDSQS HD +   HH       
Sbjct: 1   MAGLDLGNRYIHQLQTPNFNLPIHHHHHHH--------PDSQSHHDDDESPHHPLEFVPT 60

Query: 61  --LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYAR 120
               TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+G GCDVFDSIA+YAR
Sbjct: 61  TATTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSIATYAR 120

Query: 121 RRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIY 180
           RRQRGICILSG+GMV NVNLRQPTA GSVLTLQGRFEILSL+GSFLPPPAPPG TSLTIY
Sbjct: 121 RRQRGICILSGNGMVNNVNLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIY 180

Query: 181 LAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPT 240
           LAGGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERLPLED+EQEQ QEQ+Q QMQPPT
Sbjct: 181 LAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEDQEQEQ-QEQEQDQMQPPT 240

Query: 241 SH---------GNNNPFPDPSSGLQFFNLPVNMQNQIQLPF 259
           S          G+NNPFPDPSSGL FFNLP+NMQNQIQLPF
Sbjct: 241 SQGGGNSVGGGGSNNPFPDPSSGLPFFNLPINMQNQIQLPF 272

[Close]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL
Match: A0A1S3CQ43 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.7e-109
Identity = 219/281 (77.94%), Postives = 231/281 (82.21%), Query Frame = 0


Query: 1   MAGLDLSNHYIHQLQRPDFN---HHQHHHHHQPPPPPPPDSQSCHDTES--HH------- 60
           MAGLDL N YIHQLQ P+FN   HH HHHH        PDSQS HD +   HH       
Sbjct: 1   MAGLDLGNRYIHQLQTPNFNLPIHHHHHHH--------PDSQSHHDDDESPHHPLEFVPT 60

Query: 61  --LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYAR 120
               TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+G GCDVFDSIA+YAR
Sbjct: 61  TATTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSIATYAR 120

Query: 121 RRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIY 180
           RRQRGICILSG+GMV NVNLRQPTA GSVLTLQGRFEILSL+GSFLPPPAPPG TSLTIY
Sbjct: 121 RRQRGICILSGNGMVNNVNLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIY 180

Query: 181 LAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPT 240
           LAGGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERLPLED+EQEQ QEQ+Q QMQPPT
Sbjct: 181 LAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEDQEQEQ-QEQEQDQMQPPT 240

Query: 241 SH---------GNNNPFPDPSSGLQFFNLPVNMQNQIQLPF 259
           S          G+NNPFPDPSSGL FFNLP+NMQNQIQLPF
Sbjct: 241 SQGGGNSVGGGGSNNPFPDPSSGLPFFNLPINMQNQIQLPF 272

[Close]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL
Match: A0A0A0LI46 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902390 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 8.5e-108
Identity = 218/279 (78.14%), Postives = 230/279 (82.44%), Query Frame = 0


Query: 1   MAGLDLSNHYIHQLQRPDFN---HHQHHHHHQPPPPPPPDSQSCHDTES--HH------- 60
           MAGLDL N YIHQLQ P+FN    H HHHHH       PDSQS HD +   HH       
Sbjct: 1   MAGLDLGNRYIHQLQTPNFNLPIGHHHHHHH-------PDSQSRHDDDDSPHHPLEFVPT 60

Query: 61  LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRR 120
             TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+G GCDVFD IA+YARRR
Sbjct: 61  TTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDCIATYARRR 120

Query: 121 QRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLA 180
           QRGICILSG+GMVTNVNLRQPTA GSVLTLQGRFEILSL+GSFLPPPAPPG TSLTIYLA
Sbjct: 121 QRGICILSGNGMVTNVNLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIYLA 180

Query: 181 GGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSH 240
           GGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERLPLED+EQEQ QEQ+Q QMQ PTS 
Sbjct: 181 GGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEDQEQEQ-QEQEQDQMQQPTSQ 240

Query: 241 ---------GNNNPFPDPSSGLQFFNLPVNMQNQIQLPF 259
                    G+NNPFPDPSSGL FFNLP+NMQNQIQLPF
Sbjct: 241 GGGNNVGGGGSNNPFPDPSSGLPFFNLPINMQNQIQLPF 271

[Close]

BLAST of CmoCh19G002570 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.8e-79
Identity = 173/290 (59.66%), Postives = 200/290 (68.97%), Query Frame = 0


Query: 1   MAGLDLSN--HYI-HQLQRPDFNHHQHHHHHQPPPPPPPDSQSCH------DTESHHLAT 60
           MAGLDL     Y+ HQL RPD     H HH+       P +   H      D  ++H   
Sbjct: 1   MAGLDLGTAFRYVNHQLHRPDL----HLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGL 60

Query: 61  D--------------------TVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEI 120
           D                     V  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+
Sbjct: 61  DLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEV 120

Query: 121 GGGCDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSF 180
             GCDVFD +A+YARRRQRGIC+LSGSG VTNV++RQP+AAG+V+TLQG FEILSL+GSF
Sbjct: 121 TNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSF 180

Query: 181 LPPPAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQ 240
           LPPPAPPG TSLTI+LAGGQGQVVGG+VVGEL AAGPV VI ASFTNVAYERLPLE++EQ
Sbjct: 181 LPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQ 240

Query: 241 EQEQEQDQVQMQPPTSHGNNNPFPDPSS----GLQFFNLPVNMQNQIQLP 258
           +Q+            S+G  N FP+ ++    GL FFNLP+NMQ  +QLP
Sbjct: 241 QQQLGGG--------SNGGGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLP 278

[Close]

BLAST of CmoCh19G002570 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 276.2 bits (705), Expect = 2.7e-74
Identity = 160/287 (55.75%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 1   MAGLDL--SNHYIHQL------QRPDFNHHQ-------HHHHHQPPPPPPPDSQSCHDTE 60
           MAGLDL  ++ Y+H +      Q    NHH+       +HHHH             H   
Sbjct: 1   MAGLDLGTTSRYVHNVDGGGGGQFTTDNHHEDDGGAGGNHHHH-------------HHNH 60

Query: 61  SHHLATDTVAS-------------------RRPRGRPPGSKNKPKPPVIITRESANTLRA 120
           +HH   D +AS                   RRPRGRP GSKNKPKPPVI+TRESANTLRA
Sbjct: 61  NHHQGLDLIASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRA 120

Query: 121 HILEIGGGCDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILS 180
           HILE+G GCDVF+ I++YARRRQRGIC+LSG+G VTNV++RQPTAAG+V+TL+G FEILS
Sbjct: 121 HILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILS 180

Query: 181 LTGSFLPPPAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPL 240
           L+GSFLPPPAPPG TSLTI+LAG QGQVVGGNVVGELMAAGPV V+ ASFTNVAYERLPL
Sbjct: 181 LSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPL 240

Query: 241 EDEEQEQEQEQDQVQMQPPTSHGNNNPFPDPS---SGLQFFNLPVNM 251
           ++ E+          +Q     G  N + + +    GL FFNLP++M
Sbjct: 241 DEHEE---------HLQSGGGGGGGNMYSEATGGGGGLPFFNLPMSM 265

[Close]

BLAST of CmoCh19G002570 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-61
Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 52  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 111
           D   +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG
Sbjct: 100 DHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRG 159

Query: 112 ICILSGSGMVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLA 171
           +C++SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP  T L++YLA
Sbjct: 160 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 219

Query: 172 GGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 213
           GGQGQVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE++E +
Sbjct: 220 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of CmoCh19G002570 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-59
Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 0


Query: 56  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 115
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 116 SGSGMVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQV 175
           SG+G VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP  T L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 176 VGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQVQMQPPTSHGNNNPF 235
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE++E      Q  VQ       G     
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEM-----QTPVQGGGGGGGGGGGMG 296

Query: 236 PDPSSGLQ--------FFNLPVNMQNQIQLP 258
             P  G Q           LP N+   +QLP
Sbjct: 297 SPPMMGQQQAMAAMAAAQGLPPNLLGSVQLP 322

[Close]

BLAST of CmoCh19G002570 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-59
Identity = 139/283 (49.12%), Postives = 175/283 (61.84%), Query Frame = 0


Query: 3   GLDLSNHYIHQLQRP-----DFNHHQHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASR 62
           G D+  H I  L+R      D N H      Q  P    +S      ++H        +R
Sbjct: 37  GHDIDQHRIGGLKRDRDADIDPNEHSSAGKDQSTPGSGGESGGGGGGDNH-------ITR 96

Query: 63  RPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSG 122
           RPRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRGIC+LSG
Sbjct: 97  RPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSG 156

Query: 123 SGMVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGTTSLTIYLAGGQGQ 182
           +G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP  + LTIYLAGGQGQ
Sbjct: 157 NGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQ 216

Query: 183 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE------------------- 242
           VVGG+VVG LMA+GPV ++ ASF N AYERLPLE+++QE++                   
Sbjct: 217 VVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNIDGNATMGGGT 276

Query: 243 QEQDQVQMQPPTSHGNNNPFPDPSSGLQFFNLPVNMQNQIQLP 258
           Q Q Q Q Q            DP+S +Q   LP N+ N +QLP
Sbjct: 277 QTQTQTQQQQ-----QQQLMQDPTSFIQ--GLPPNLMNSVQLP 305

The following BLAST results are available for this feature:

BLAST of CmoCh19G002570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	4.0e-78	59.66	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	3.8e-73	55.75	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	4.9e-60	67.68	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	1.6e-58	57.35	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	4.6e-58	49.12	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of CmoCh19G002570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFD9	2.4e-142	100.00	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HQT4	2.8e-135	95.77	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111466...	[more]
A0A5A7T556	7.7e-109	77.94	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CQ43	7.7e-109	77.94	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 ...	[more]
A0A0A0LI46	8.5e-108	78.14	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G9023...	[more]

BLAST of CmoCh19G002570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	2.8e-79	59.66	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	2.7e-74	55.75	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	3.5e-61	67.68	Predicted AT-hook DNA-binding family protein	[more]
AT4G12050.1	1.1e-59	57.35	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	3.2e-59	49.12	AT-hook motif nuclear-localized protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 4..256 e-value: 2.5E-101 score: 336.7
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 1..257
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 85..198 e-value: 1.3E-28 score: 99.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 81..219 score: 37.615139
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 85..168 e-value: 5.12031E-21 score: 83.4038
None	No IPR available	GENE3D	3.30.1330.80		coord: 84..218 e-value: 6.9E-24 score: 86.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..242
None	No IPR available	PANTHER	PTHR31100:SF68	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 1..257
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 81..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G002570.1	CmoCh19G002570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding