Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGAAAAACCCAAAAAGGGAAAACGAAAGAAAACTCTGCCATTTCAAAACCTTCGCAAATTGCAGCTATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCGCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGATTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTTCGGACGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTAATCGAAGTCTAGAATTATCAAATTGAAAGTCTGCTTTGATCTGAAATCCTGAAATCCTGAAATCTAATGGAATATCACACTTTAATTTCTTTGATTTGATTTGATTGATGATTTAAAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCGAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGGAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGGTAATTTTCGATATCTGGATCGAGCAGTTTAGCCCTAATTTCATGAACTGGAAGACTCTGAATGTTTGAATTTGTTTGTGAAGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGACGGCGGTGGCTCCGGCGCCGGCGCCAGCTCTGGTTGCGGCGTTTTAATGGAAGAAATTGGTTTGAAGGAGGTTTCGCGGATATAGGAGAGGAAGAATTGAGGGAGAAGTGGCACGTGATTTGTGGACGTGCCATTTCAGGAGGAAATAAATTGCACGTGACTTGTTGGTGTAATGTAAAGTCCCATAATAATAAAAAAAAATAACTCTGATTTCTATTTTAAAATATTCTATTTATTAGGAAAATTTCGACGTCAAATCCTAAATTACCACCAAATATTTTAGTTGGGG
mRNA sequence
AACGAAAAACCCAAAAAGGGAAAACGAAAGAAAACTCTGCCATTTCAAAACCTTCGCAAATTGCAGCTATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCGCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGATTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTTCGGACGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCGAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGGAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGACGGCGGTGGCTCCGGCGCCGGCGCCAGCTCTGGTTGCGGCGTTTTAATGGAAGAAATTGGTTTGAAGGAGGTTTCGCGGATATAGGAGAGGAAGAATTGAGGGAGAAGTGGCACGTGATTTGTGGACGTGCCATTTCAGGAGGAAATAAATTGCACGTGACTTGTTGGTGTAATGTAAAGTCCCATAATAATAAAAAAAAATAACTCTGATTTCTATTTTAAAATATTCTATTTATTAGGAAAATTTCGACGTCAAATCCTAAATTACCACCAAATATTTTAGTTGGGG
Coding sequence (CDS)
ATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCGCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGATTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTTCGGACGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCGAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGGAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGACGGCGGTGGCTCCGGCGCCGGCGCCAGCTCTGGTTGCGGCGTTTTAA
Protein sequence
MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNWSGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEEATAVAPAPAPALVAAF
Homology
BLAST of CmoCh19G002410 vs. ExPASy TrEMBL
Match:
A0A6J1HIV3 (uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC111463957 PE=4 SV=1)
HSP 1 Score: 532.7 bits (1371), Expect = 8.8e-148
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
Query: 61 SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120
SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE
Sbjct: 61 SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120
Query: 121 FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD
Sbjct: 121 FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
Query: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY
Sbjct: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
Query: 241 AHFLWLVEDDEEEATAVAPAPAPALVAAF 270
AHFLWLVEDDEEEATAVAPAPAPALVAAF
Sbjct: 241 AHFLWLVEDDEEEATAVAPAPAPALVAAF 269
BLAST of CmoCh19G002410 vs. ExPASy TrEMBL
Match:
A0A6J1HRN2 (uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874 PE=4 SV=1)
HSP 1 Score: 513.1 bits (1320), Expect = 7.2e-142
Identity = 262/270 (97.04%), Postives = 265/270 (98.15%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
Query: 61 SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120
SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPS IPE+EFLNQDEFHRDS ADTE
Sbjct: 61 SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSGIPEEEFLNQDEFHRDSVADTE 120
Query: 121 FLNSGIVSGDGGDFVA-DKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEK 180
FLNSGIVSGDGGDFVA DKF+DGSSESSKIRAYYEEMLKSNPSD LILRNYGKFLHEVEK
Sbjct: 121 FLNSGIVSGDGGDFVATDKFTDGSSESSKIRAYYEEMLKSNPSDPLILRNYGKFLHEVEK 180
Query: 181 DSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240
D+KRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY
Sbjct: 181 DTKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240
Query: 241 YAHFLWLVEDDEEEATAVAPAPAPALVAAF 270
YAHFLWLVEDDEEEATAVA APAPALVAAF
Sbjct: 241 YAHFLWLVEDDEEEATAVALAPAPALVAAF 270
BLAST of CmoCh19G002410 vs. ExPASy TrEMBL
Match:
A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)
HSP 1 Score: 360.1 bits (923), Expect = 7.8e-96
Identity = 191/273 (69.96%), Postives = 225/273 (82.42%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
M+SAL+RTVS+PV+ + ASSSFSNY+PL+G +G SS+SSPKISLHFE+N+ RG+N
Sbjct: 1 MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
Query: 61 SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRDSFA- 120
SGIRRA+SESDISRSLHEVS+PYDQFGG RSR S SEIPE+EFLNQDEF DS
Sbjct: 61 SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
Query: 121 DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180
D+ L+SGI DG +F D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
Query: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240
EKD R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
Query: 241 GYYAHFLWLVEDD-EEEATAVAPAPAPALVAAF 270
GYYA+FLW +EDD EEEA V PA A+VAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPA---AMVAAF 270
BLAST of CmoCh19G002410 vs. ExPASy TrEMBL
Match:
A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)
HSP 1 Score: 352.8 bits (904), Expect = 1.2e-93
Identity = 189/273 (69.23%), Postives = 222/273 (81.32%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
M+SAL RTVS+PV+S + ASSSFSNY+PL+G +G SS+SSPKISL FE+N+ RG+N
Sbjct: 1 MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60
Query: 61 SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRDSF-A 120
SGIRR +SESDISRSLHEVS+PYDQFGG RSR S SEIPE+EFLNQDEF DS
Sbjct: 61 SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMEE 120
Query: 121 DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180
D+ L+SGI DG +F D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
Query: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240
EKD R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
Query: 241 GYYAHFLWLVEDDEE-EATAVAPAPAPALVAAF 270
G YA+FLW +EDDEE EA V PA A+VAAF
Sbjct: 241 GCYAYFLWQIEDDEEQEAAEVWPA---AMVAAF 270
BLAST of CmoCh19G002410 vs. ExPASy TrEMBL
Match:
A0A6J1DU99 (uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023531 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 2.7e-80
Identity = 182/303 (60.07%), Postives = 208/303 (68.65%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
M+SAL RT SVPV+S A A S SFSNY+P + S +SSPKISLHFEINHRRG
Sbjct: 1 MKSALARTGSVPVISPAGAPSPSFSNYRPFH------KSYVSSPKISLHFEINHRRGAKS 60
Query: 61 SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLN------------- 120
SGIRRA+SESDI+RSLH++S+ YDQ GG SR S PS IPEDEFLN
Sbjct: 61 SGIRRASSESDIARSLHQISNRYDQLGGVGSR--SFPSGIPEDEFLNESRDAVAEEWIIQ 120
Query: 121 --QDEFHRDSFA-----------DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYE 180
+DEF ++A + F SGI G GG+ V D FS GSS+ SKI AYYE
Sbjct: 121 EDEDEFDISNYAGDFSGGAISMKNAGFFGSGI--GSGGNIVTDTFSGGSSDRSKIGAYYE 180
Query: 181 EMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQR 240
EMLK NPSD+L+LRNYGKFLHEVE D+ RAEE Y RAILASP DGELL+LYGKLVW+TQR
Sbjct: 181 EMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQR 240
Query: 241 DKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE--------ATAVAPAPAPALV 270
D++RA+ YFDRAV ASP+DC V+G YAHFLW VE DEEE A A P ALV
Sbjct: 241 DEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEAAAAEKAEVPPAALV 293
BLAST of CmoCh19G002410 vs. TAIR 10
Match:
AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 171.8 bits (434), Expect = 7.6e-43
Identity = 117/295 (39.66%), Postives = 161/295 (54.58%), Query Frame = 0
Query: 1 MESALIRTVSVPVLSSAVAASSSFSNYKPL-----YGALSGQNSSISSPKISLHFEINHR 60
M+S L+RT S+PVL + + + S P+ +LS + KIS+ + N
Sbjct: 1 MKSLLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKAN-- 60
Query: 61 RGKNWSGIRRAASESDISRS---LHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFH 120
G+RR SESD+ RS L V S P+ IPED+ ++E
Sbjct: 61 -----VGMRRVLSESDVIRSERMLKRVGSK------------PSPARIPEDDEAGEEEIR 120
Query: 121 RDSFAD--------------TEFLNSGIVSGDG-GDFVADKFSDGSSESSKIRAYYEEML 180
FAD F G+ G G + G + SKI YY EML
Sbjct: 121 ---FADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREML 180
Query: 181 KSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKR 240
+SNP+++L+L NYGKFL+EVEKD++ AEE Y RAIL +P DGE L++YG+L+W+T+RD++
Sbjct: 181 RSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEK 240
Query: 241 RAQYYFDRAVCASPNDCLVIGYYAHFLWLVE----DDEEEATAVAPAPAPALVAA 269
RAQ YFD+AV ASPNDC+V+G YA F+W E DDEEE A +P +V+A
Sbjct: 241 RAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEEWMAASPLMVSA 273
BLAST of CmoCh19G002410 vs. TAIR 10
Match:
AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 119.0 bits (297), Expect = 5.8e-27
Identity = 89/273 (32.60%), Postives = 132/273 (48.35%), Query Frame = 0
Query: 5 LIRTVSVPVLSSAVAASS-------------SFSNYKPLYGALSGQNSSISSPKISLHFE 64
L+R+ S P+L+S V SS ++ + LS +SS +S+H
Sbjct: 2 LLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSI--TLSASSSSCCYSPMSVHSS 61
Query: 65 INHRRGKNWSGIRRAASESDISRSLHEVSSPYDQF--GGFRSRYWSVPSEIPED---EFL 124
+ R ++R AS+SD+ R L P +F GG ++ ++ E +
Sbjct: 62 DDSSR-----RMKRTASDSDL-RHLTSTKPPVSKFLSGG------ALMEDVDEGIGFGLI 121
Query: 125 NQDEFHRDSFA---DTEFL---NSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSN 184
+ S+A DTE G+ G G + G +Y +M+++N
Sbjct: 122 RTSSYDGISWALDEDTEVAGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDVHYRKMIEAN 181
Query: 185 PSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQ 244
P + + L NY KFL EV KD +AEE RAIL SP DG +LA+Y +LVW +D RA+
Sbjct: 182 PGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAE 241
Query: 245 YYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE 254
YF++AV A+P DC V YA FLW E++EEE
Sbjct: 242 NYFNQAVAAAPEDCYVQASYARFLWDAEEEEEE 260
BLAST of CmoCh19G002410 vs. TAIR 10
Match:
AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 115.9 bits (289), Expect = 4.9e-26
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 0
Query: 123 NSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSK 182
++G G GGD G + YYEEM++ P D L+L NY +FL EV+ D +
Sbjct: 87 SNGGFGGRGGDGAG---GGGGGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGR 146
Query: 183 RAEECYSRAILA-SPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYA 242
+AEE RA+L+ S RDGELL++YG L+W D RAQ Y+D+AV +SP+DC V+ YA
Sbjct: 147 KAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYA 206
Query: 243 HFLWLVEDDEEE 254
FLW E++ EE
Sbjct: 207 RFLWDAEEEVEE 215
BLAST of CmoCh19G002410 vs. TAIR 10
Match:
AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 110.9 bits (276), Expect = 1.6e-24
Identity = 55/124 (44.35%), Postives = 74/124 (59.68%), Query Frame = 0
Query: 130 DGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYS 189
+GG V DG YY EM+ SNP ++L+ NY KFL EV+ D K+AEE
Sbjct: 146 NGGGGVGGSGVDGGRSEDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCE 205
Query: 190 RAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVED 249
RAIL + DG +L+LY L+ +D++RA Y+ +AV SP DC V YA FLW V++
Sbjct: 206 RAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDE 265
Query: 250 DEEE 254
DEE+
Sbjct: 266 DEED 269
BLAST of CmoCh19G002410 vs. TAIR 10
Match:
AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 92.0 bits (227), Expect = 7.6e-19
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 0
Query: 152 YYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWD 211
YY+ ML+ P L+L+NY KFL E + D AEE Y + + P DG LA YG+LV
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183
Query: 212 TQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE 254
+D+ +A YF+RAV ASP+D +V+ YA FLW + D+++
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDD 224
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HIV3 | 8.8e-148 | 100.00 | uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC1114639... | [more] |
A0A6J1HRN2 | 7.2e-142 | 97.04 | uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874... | [more] |
A0A6J1EX26 | 7.8e-96 | 69.96 | uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373... | [more] |
A0A6J1K5B2 | 1.2e-93 | 69.23 | uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305... | [more] |
A0A6J1DU99 | 2.7e-80 | 60.07 | uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |
AT4G17940.1 | 7.6e-43 | 39.66 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G20190.1 | 5.8e-27 | 32.60 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G32340.1 | 4.9e-26 | 45.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G80130.1 | 1.6e-24 | 44.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G04530.1 | 7.6e-19 | 44.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |