CmoCh19G002400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SNARE associated Golgi protein family
Location	Cmo_Chr19: 1702176 .. 1705275 (+)
RNA-Seq Expression	CmoCh19G002400
Synteny	CmoCh19G002400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTAAAGGAAAGAAGATTGTTGTTAAAACAGATTTCAATTTCGTTTCTGTTTCTGTTTCTCTTTCTTCATCCTTTCCTCTGGGTTTTCTGTTTGTTTCCCGAGAAAACAACGGAAAGTGAAAAAGGGGATCCGGGAAAATCCTTGAGGAAAATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAAGATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGGTATTTCTTCTGTTCATTGCGTTTTCTTTCGATTTTGATGATGGATTTTTTCGTTTCGTTCGTTTTGTGGATTCTTTTTTGTGTTTGATCGCTTGATTAGGTCATTTTTCTTGTGATTTCTGGAATTGGGTTTGGCTGTGTTCTTGTTCTTGGAGTGATTAGCTAAGCTTTTAATGGCTTGCTCTTGAATGATTTGATTGTCTTTTGAATGGGCGCTAAATACTTCTTTTAGGGAGTTTCAAATTCAAGTGTTTGTATCAGAAATATGATCAGATCTGACACTTTCCTTGATAATGTTCTTGTGGGATTCTTATGGTTCTGGCTGATGAGATTTTGGCAGCACTTTCTTGAATGTTTGTGGATATGGTTTGTGTGCGATCCACGTTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGATGAGGAAACCTCTCCCTAACCGTGAGGCTGACAGCTATGCGTCACGAGGAAAAACGGACAATATCTATTAGTAATGAACTTGGGTTGTTACAAATGGTATTAGAGTCAAACACTCGAGGACGCTGGCCACCAAGGGAAGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAATCGTGAGGCTGATGGTGATACGTAATGGGTCAAAGCAAACAATATTTGCTAGTGGTGGGTTTGGGCTGTTACAAATGGCATTAGAGCCAGACACTGGGCCGTGTGCTAGCGAGGATGCTGGTCCTCAAGGGAGATGAATTGTGAGATCTCACGTTGGTTGCAGAGGGGAAAGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATTGCGTTTTAAAATCGTGAGATTGATGGTGATACGTAATGGGCTAAAGCAACCAATATCTGCTAGCGGTGGGTTTGGGCCATTACAAATGGCATTAGAGCCGGACACTAGGCCGTGTGCCATCGAGGATGCTGGTCTCCAAGGGAAATGGATTGTGAGATCTCATATTGGTCGGAGAGCGGAATGAAGCATTCCTTTACAAGAGTGTGAAAACCTCTCTCTAATAGACACGTTTTAAAACCGTGAGACTGACGACAATACGTAATGGGCCAAAACAGACAATATCTACTAGCGGTGGGCTTGGGTTATTACTTATCTCGTCATAAATGTTGCTATGTAAAAGCTTGTGGATGGTTAAAATGTGGCTAGAATGTTTGGATATGGATTATTGTTTGATGAATATTCTTTCTTTTAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTTGTCTTCACCGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTAAGTTTCATATCCCCGTCTCTTTCGTAGTCGATTCTATAAGGTTTTTTCGATGTTGAATCGATTCCTCTCTCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCGACCTTGCCAAATACATTCATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGTAATCACTTCTCCATTGCTGTTGTTTGTCTTTGTGTTGCTTGTAGCTCATTGTCATGGGTTTCTAGAGAGGGATGATGTGAGATCGGTTAGATAGGGGAATGAACCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACACGTTTTAAAAACCTCTGTTAGTGGTGGGCTTGGTTTGTTACAAATAGTATTAGAGCTAGACATCGGTCGGTGTGCCAGCGGGACGCTGGCCCCCAAGGGAGGTGGATTGTAAGATCCCACACCGGTTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAATTACATAGTTCGGAAATGCAGTTAGAAGCATACTTGACATTCTTAGGTGAGTGAGTGAGAGTGAGTGAAGAACTAACGTTGATTTGGCTGTTTGCTTCTCAGCTCATATATTGATGTTTCTAAACTGTATATTGAGTGACTCGAACATCTCGAATTGTATGACAGGCTGGGCTGACGCTTGGAGAATTGCAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCGGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAGGATCCTATGGCGTAACGCTTGAGCAAATTTGCAGCCTCGTTCCTTGTACAGGTACAGTGTCATCACCCGAACAAGCCATTGAAGGTGATTATGGATCGTTTGGTGTCGAATATAATGTGGATGTCGGGTTTGGAGGGGATTGGGAGAAGGGTCAGAGTTATTAAATTTGGATAATTGTATTTGATTGACCAGAAAAATGATAAAAGGAATGATCATATTCATTTGATTCCCCAGAAAATTATAAAATGGAAGATCATATTCATTTGTGAATATTTTGTTTATATTCTGGAAAATTTGTAATATCTTTTGAATATTCGATTTCTCGATCAAATGTAAATATCTT

mRNA sequence

ACCCTAAAGGAAAGAAGATTGTTGTTAAAACAGATTTCAATTTCGTTTCTGTTTCTGTTTCTCTTTCTTCATCCTTTCCTCTGGGTTTTCTGTTTGTTTCCCGAGAAAACAACGGAAAGTGAAAAAGGGGATCCGGGAAAATCCTTGAGGAAAATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAAGATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTTGTCTTCACCGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCGACCTTGCCAAATACATTCATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGCTGGGCTGACGCTTGGAGAATTGCAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCGGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAGGATCCTATGGCGTAACGCTTGAGCAAATTTGCAGCCTCGTTCCTTGTACAGGTACAGTGTCATCACCCGAACAAGCCATTGAAGGTGATTATGGATCGTTTGGTGTCGAATATAATGTGGATGTCGGGTTTGGAGGGGATTGGGAGAAGGGTCAGAGTTATTAAATTTGGATAATTGTATTTGATTGACCAGAAAAATGATAAAAGGAATGATCATATTCATTTGATTCCCCAGAAAATTATAAAATGGAAGATCATATTCATTTGTGAATATTTTGTTTATATTCTGGAAAATTTGTAATATCTTTTGAATATTCGATTTCTCGATCAAATGTAAATATCTT

Coding sequence (CDS)

ATGGAGAAGAAAGGGGAAAAGAATGTGGGCGAAAAGATGAGCAAATTTCAATTGAGTTTTTGGGATTTGGCTGTGTTTAGCACCGTTGTTATTGCCTTCCTTTTTGGCCTTCTTTGTGTTTACCTAACCATGCCGGCCTCCGATTATAGCTTTCTTAAGCTTCCTCGCAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACAAGTGACTACACTGCACAGGTCTTAGTAGGATACTGCGTTGTATACATCTTTATGCAAACCTTCATGATACCTGGAACTGTTTTCATGTCACTGCTGGCTGGAGCCCTTTTCGGGGTCTTCAAGGGCGTTGCTCTCGTTGTCTTCACCGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTCTCGAAGATGATCGGGAAGCCCCTCGCCTTTACTCTTTGGCCTGACAAGGTGAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCGACCTTGCCAAATACATTCATCAATGTTGCATCTCCGATCGTCGATGTGCCTTACCATACCTTCTTCTTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTACGTTACAGTCAAGGCTGGGCTGACGCTTGGAGAATTGCAATCGGTTGGTGATCTTTACGACTTCAACTCGATTGCCACATTGTTTCTGATCGGAATTGTGTCGGTGACCCCGACATTAGTTGGCAAGAGTAAAGCATAG

Protein sequence

MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKSKA

Homology

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BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot
Match: Q8L586 (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At4g09580 PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.2e-83
Identity = 145/241 (60.17%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 12  KMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEY 71
           K  +F LS W+ AVF TV + F  GL C+YLTMPA++Y  LK+PR + DL++L+++L  Y
Sbjct: 44  KSERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSY 103

Query: 72  TSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 131
            S+Y A+ ++GYC  YIFMQTFMIPGT+FMSLLAGALFGV +G  LVV  ATAGA SC+F
Sbjct: 104 ASEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFF 163

Query: 132 LSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVP 191
           LSK++G+PL   LWP+K++FFQ ++++RR+ LLNYMLFLR+TPTLPN FIN++SPIVD+P
Sbjct: 164 LSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIP 223

Query: 192 YHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKS 251
           +H FF AT+VGL+PA+Y+TV+AGL LG+L+SV DLYDF +++ LFLIG +S+ P L+ + 
Sbjct: 224 FHVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRK 283

Query: 252 K 253
           +
Sbjct: 284 R 284

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BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot
Match: Q8MXN7 (Transmembrane protein 41 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275543 PE=3 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-48
Identity = 98/233 (42.06%), Postives = 152/233 (65.24%), Query Frame = 0


Query: 18  LSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDYTA 77
           L  W L +   V I+ +  L   + ++       ++LP+N +D+++L D L +YT D   
Sbjct: 97  LPLWLLVIVFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQYTDDNYF 156

Query: 78  QVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIG 137
            V+  + V+Y F+Q F IPG+VF+S L+G LFG+  G  LV F AT GA+  Y +S  IG
Sbjct: 157 IVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLISYYIG 216

Query: 138 KPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFF 197
           + L   L+PDK+K F D +S++R+ LLNY++FLR+TP LPN FIN+ASP++DVP HTF  
Sbjct: 217 RNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFAI 276

Query: 198 ATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGK 251
            T +G++PA ++ VKAG+ +  +Q+  D++D  SI T+  + ++S+ PTL+ K
Sbjct: 277 GTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQK 329

[Close]

BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot
Match: Q5ZIL6 (Transmembrane protein 41B OS=Gallus gallus OX=9031 GN=TMEM41B PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 86/231 (37.23%), Postives = 138/231 (59.74%), Query Frame = 0


Query: 23  LAVFSTVVIAFLFGLLCVYLTMP---ASDYSFLKLPRNLQDLQILRDHLEEYTSDYTAQV 82
           L +  ++     F +  VY   P     +   +K+PR++ D + L   L +Y   +  QV
Sbjct: 32  LLILVSIFTIAAFLMFLVYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQV 91

Query: 83  LVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKP 142
           LV Y   Y+F+QTF IPG++F+S+L+G L+     + LV   +  GAS CY LS ++G+P
Sbjct: 92  LVAYFATYVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRP 151

Query: 143 LAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFFAT 202
           + +    +K   + +QV R RE L+NY++FLR+TP LPN FIN+ SP+++VP   FF  T
Sbjct: 152 VVYKYLTEKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGT 211

Query: 203 VVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGK 251
            +G+ P ++V +KAG TL +L + G+   +NS+  L ++ I+S+ P L  K
Sbjct: 212 FLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSLFVLMILAILSILPALFQK 262

[Close]

BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot
Match: Q5BJD5 (Transmembrane protein 41B OS=Homo sapiens OX=9606 GN=TMEM41B PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 86/231 (37.23%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 23  LAVFSTVVIAFLFGLLCVYLTMP---ASDYSFLKLPRNLQDLQILRDHLEEYTSDYTAQV 82
           L +  ++ ++  F +  VY   P     +   +K+PR++ D + L   L +Y   +  QV
Sbjct: 54  LLILVSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQV 113

Query: 83  LVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKP 142
           LV Y   YIF+QTF IPG++F+S+L+G L+     + LV   +  GAS CY LS ++G+P
Sbjct: 114 LVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRP 173

Query: 143 LAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFFAT 202
           + +    +K   +  QV R RE L+NY++FLR+TP LPN FIN+ SP+++VP   FF  T
Sbjct: 174 VVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGT 233

Query: 203 VVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGK 251
            +G+ P ++V +KAG TL +L + G+   +NSI  L ++ ++S+ P +  K
Sbjct: 234 FLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQK 284

[Close]

BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot
Match: Q5U4K5 (Transmembrane protein 41B OS=Xenopus laevis OX=8355 GN=tmem41b PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-39
Identity = 79/199 (39.70%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 52  LKLPRNLQDLQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGV 111
           +K+PR++ D + L   L +Y   +  +VLV Y   YIF+QTF IPG++F+S+L+G L+  
Sbjct: 73  IKVPRDMDDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPF 132

Query: 112 FKGVALVVFTATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLR 171
              + LV   +  GAS CY LS ++G+P+ +    DK   +  QV R R+ L+NY++FLR
Sbjct: 133 PLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLR 192

Query: 172 LTPTLPNTFINVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNS 231
           +TP LPN FIN+ SP+++VP   FF  T +G+ P ++V +KAG TL +L + G+   +NS
Sbjct: 193 ITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNS 252

Query: 232 IATLFLIGIVSVTPTLVGK 251
           +  L ++ ++S+ P +  K
Sbjct: 253 VIILMVLAVLSILPAIFQK 271

[Close]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL
Match: A0A6J1HL58 (uncharacterized membrane protein At4g09580 OS=Cucurbita moschata OX=3662 GN=LOC111463958 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.8e-134
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60
           MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD
Sbjct: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60

Query: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120
           LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF
Sbjct: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120

Query: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180
           TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF
Sbjct: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180

Query: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240
           INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI
Sbjct: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240

Query: 241 VSVTPTLVGKSKA 254
           VSVTPTLVGKSKA
Sbjct: 241 VSVTPTLVGKSKA 253

[Close]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL
Match: A0A6J1HU39 (uncharacterized membrane protein At4g09580 OS=Cucurbita maxima OX=3661 GN=LOC111466877 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60
           MEKKGEKNV EKMSKFQLSFWDLAVFS VVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD
Sbjct: 1   MEKKGEKNVVEKMSKFQLSFWDLAVFSAVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60

Query: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120
           LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF
Sbjct: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120

Query: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180
           TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRR+GLLNYMLFLRLTPTLPNTF
Sbjct: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRRKGLLNYMLFLRLTPTLPNTF 180

Query: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240
           INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI
Sbjct: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240

Query: 241 VSVTPTLVGKSKA 254
           VSVTPTLVGKSKA
Sbjct: 241 VSVTPTLVGKSKA 253

[Close]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL
Match: A0A0A0LI03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901130 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-125
Identity = 235/253 (92.89%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60
           MEKKG+ NV  KM KFQ+SFW++ VF+TVV AFL GLLCVYLTMPASDYSFLKLPRNLQD
Sbjct: 1   MEKKGDMNVVGKMGKFQVSFWEVGVFTTVVFAFLSGLLCVYLTMPASDYSFLKLPRNLQD 60

Query: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120
           LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF
Sbjct: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120

Query: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180
           TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVS+RREGLLNYMLFLRLTPTLPNTF
Sbjct: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSKRREGLLNYMLFLRLTPTLPNTF 180

Query: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240
           INVASPIVDVPYHTFF ATVVGLIPAAYVTV+AGL LGEL+SVGDLYDFNSIATLFLIGI
Sbjct: 181 INVASPIVDVPYHTFFLATVVGLIPAAYVTVRAGLALGELRSVGDLYDFNSIATLFLIGI 240

Query: 241 VSVTPTLVGKSKA 254
           VSVTPTLVGKSK+
Sbjct: 241 VSVTPTLVGKSKS 253

[Close]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL
Match: A0A1S3CQ67 (uncharacterized membrane protein At4g09580 OS=Cucumis melo OX=3656 GN=LOC103503560 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.9e-124
Identity = 235/253 (92.89%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60
           MEKKG+ NV  KM KFQLSFW+L VF+TVV AFL GLLCVYLTMPASDYSFLKLPRNLQD
Sbjct: 1   MEKKGDMNVVGKMGKFQLSFWELGVFTTVVFAFLSGLLCVYLTMPASDYSFLKLPRNLQD 60

Query: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120
           LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF
Sbjct: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120

Query: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180
           TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVS+RR+ LLNYMLFLRLTPTLPNTF
Sbjct: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSKRRKKLLNYMLFLRLTPTLPNTF 180

Query: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240
           INVASPIVDVPYHTFF ATVVGLIPAAYVTV+AGL LGEL+SVGDLYDFNSIATLFLIGI
Sbjct: 181 INVASPIVDVPYHTFFLATVVGLIPAAYVTVRAGLALGELRSVGDLYDFNSIATLFLIGI 240

Query: 241 VSVTPTLVGKSKA 254
           VSVTPTLVGKSK+
Sbjct: 241 VSVTPTLVGKSKS 253

[Close]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL
Match: A0A6J1E3I6 (uncharacterized membrane protein At4g09580 OS=Momordica charantia OX=3673 GN=LOC111026149 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.3e-120
Identity = 227/253 (89.72%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MEKKGEKNVGEKMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQD 60
           MEK+ E NV  K  KF LS+W++ V STVVI FLFG+LCVYLTMP SDYSFLKLPRNLQD
Sbjct: 1   MEKREEMNVAGKAGKFPLSYWEVGVVSTVVIGFLFGILCVYLTMPDSDYSFLKLPRNLQD 60

Query: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120
           LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF
Sbjct: 61  LQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVF 120

Query: 121 TATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTF 180
           TATAGASSCYFLSKMIGKPL FTLWPDKVKFFQDQVSRRRE LLNYMLFLRLTPTLPNTF
Sbjct: 121 TATAGASSCYFLSKMIGKPLVFTLWPDKVKFFQDQVSRRRERLLNYMLFLRLTPTLPNTF 180

Query: 181 INVASPIVDVPYHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGI 240
           INVASPIVDVPYH FF  TVVGLIPAAYVTV+AGL LGELQSVGDLYDFNSIATLFLIGI
Sbjct: 181 INVASPIVDVPYHIFFLGTVVGLIPAAYVTVRAGLALGELQSVGDLYDFNSIATLFLIGI 240

Query: 241 VSVTPTLVGKSKA 254
           VSVTPT VGK K+
Sbjct: 241 VSVTPTFVGKGKS 253

[Close]

BLAST of CmoCh19G002400 vs. TAIR 10
Match: AT4G17790.1 (SNARE associated Golgi protein family )

HSP 1 Score: 378.3 bits (970), Expect = 5.0e-105
Identity = 188/238 (78.99%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 16  FQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDY 75
           + LSFW++   S VV+ F+ GL+CVYLTMP SDYSFLKLPRNL+DLQILRD+LE YTSDY
Sbjct: 27  YSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRDNLEIYTSDY 86

Query: 76  TAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKM 135
           T QVLVGYC+VY+FMQTFMIPGTVFMSLLAGALFGV KG+ALVV TATAGASSCYFLSK+
Sbjct: 87  TVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGASSCYFLSKL 146

Query: 136 IGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTF 195
           IG+PL F+LWPDK+ FFQDQV+RR++ LLNYMLFLRLTPTLPNTFINVASPIVDVPYH F
Sbjct: 147 IGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIF 206

Query: 196 FFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKSKA 254
           F AT +GLIPAA+VTV+AGL LGEL+S+GDLYDF+S+ATL LIG++SVTPTL+GK +A
Sbjct: 207 FLATFIGLIPAAFVTVRAGLALGELKSLGDLYDFSSMATLCLIGVLSVTPTLIGKKQA 264

[Close]

BLAST of CmoCh19G002400 vs. TAIR 10
Match: AT1G71940.1 (SNARE associated Golgi protein family )

HSP 1 Score: 325.5 bits (833), Expect = 3.8e-89
Identity = 155/241 (64.32%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 12  KMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEY 71
           K+ +F LS W+LAV   V + F  GL C+Y+TMPA+++  LKLPR+L DL++L+D+L  Y
Sbjct: 29  KLDRFPLSRWELAVSLGVFLVFSSGLCCIYMTMPAAEFGKLKLPRSLADLRLLKDNLANY 88

Query: 72  TSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 131
            ++Y AQ ++GYC  YIFMQTFMIPGT+FMSLLAGALFGVFKGV LVVF ATAGA+SC+F
Sbjct: 89  ANEYPAQFVLGYCATYIFMQTFMIPGTIFMSLLAGALFGVFKGVVLVVFNATAGATSCFF 148

Query: 132 LSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVP 191
           LSK+IG+PL   LWPDK++FFQ ++S+RR+ LLNYMLFLR+TPTLPN FIN+ASPIVDVP
Sbjct: 149 LSKLIGRPLITWLWPDKLRFFQAEISKRRDKLLNYMLFLRITPTLPNLFINLASPIVDVP 208

Query: 192 YHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKS 251
           +H FF AT++GLIPAAY+TV+AGL +G+L+SV DLYDF +++ LFLIG +S+ PT++ + 
Sbjct: 209 FHVFFLATLIGLIPAAYITVRAGLAIGDLKSVKDLYDFKTLSVLFLIGFISILPTILKRK 268

Query: 252 K 253
           K
Sbjct: 269 K 269

[Close]

BLAST of CmoCh19G002400 vs. TAIR 10
Match: AT4G09580.1 (SNARE associated Golgi protein family )

HSP 1 Score: 308.9 bits (790), Expect = 3.7e-84
Identity = 145/241 (60.17%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 12  KMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEY 71
           K  +F LS W+ AVF TV + F  GL C+YLTMPA++Y  LK+PR + DL++L+++L  Y
Sbjct: 44  KSERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSY 103

Query: 72  TSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 131
            S+Y A+ ++GYC  YIFMQTFMIPGT+FMSLLAGALFGV +G  LVV  ATAGA SC+F
Sbjct: 104 ASEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFF 163

Query: 132 LSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVP 191
           LSK++G+PL   LWP+K++FFQ ++++RR+ LLNYMLFLR+TPTLPN FIN++SPIVD+P
Sbjct: 164 LSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIP 223

Query: 192 YHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNSIATLFLIGIVSVTPTLVGKS 251
           +H FF AT+VGL+PA+Y+TV+AGL LG+L+SV DLYDF +++ LFLIG +S+ P L+ + 
Sbjct: 224 FHVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRK 283

Query: 252 K 253
           +
Sbjct: 284 R 284

[Close]

BLAST of CmoCh19G002400 vs. TAIR 10
Match: AT1G71940.2 (SNARE associated Golgi protein family )

HSP 1 Score: 305.1 bits (780), Expect = 5.4e-83
Identity = 146/220 (66.36%), Postives = 186/220 (84.55%), Query Frame = 0


Query: 12  KMSKFQLSFWDLAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEY 71
           K+ +F LS W+LAV   V + F  GL C+Y+TMPA+++  LKLPR+L DL++L+D+L  Y
Sbjct: 29  KLDRFPLSRWELAVSLGVFLVFSSGLCCIYMTMPAAEFGKLKLPRSLADLRLLKDNLANY 88

Query: 72  TSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 131
            ++Y AQ ++GYC  YIFMQTFMIPGT+FMSLLAGALFGVFKGV LVVF ATAGA+SC+F
Sbjct: 89  ANEYPAQFVLGYCATYIFMQTFMIPGTIFMSLLAGALFGVFKGVVLVVFNATAGATSCFF 148

Query: 132 LSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVP 191
           LSK+IG+PL   LWPDK++FFQ ++S+RR+ LLNYMLFLR+TPTLPN FIN+ASPIVDVP
Sbjct: 149 LSKLIGRPLITWLWPDKLRFFQAEISKRRDKLLNYMLFLRITPTLPNLFINLASPIVDVP 208

Query: 192 YHTFFFATVVGLIPAAYVTVKAGLTLGELQSVGDLYDFNS 232
           +H FF AT++GLIPAAY+TV+AGL +G+L+SV DLYDF +
Sbjct: 209 FHVFFLATLIGLIPAAYITVRAGLAIGDLKSVKDLYDFKT 248

[Close]

BLAST of CmoCh19G002400 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 49/202 (24.26%), Postives = 87/202 (43.07%), Query Frame = 0


Query: 23  LAVFSTVVIAFLFGLLCVYLTMPASDYSFLKLPRNLQDLQI-LRDHLEEYTSDYTAQVLV 82
           +A  S     F   +  + L    S   FL + + L+D  + +++ L  +         +
Sbjct: 1   MAAMSFTPSTFRIAISLLLLVAIVSAVIFLPVEQKLKDFLLWIKEDLGPFGP-------L 60

Query: 83  GYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKPLA 142
              + YI +    +P +V ++L  G LFG+  G       AT GA++ + L + IGK   
Sbjct: 61  ALALAYIPLTIVAVPASV-LTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYV 120

Query: 143 FTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFFATVV 202
            +      KF    V+ ++ G    +L LR+ P LP   +N    +  V    +  AT +
Sbjct: 121 TSKIKHYPKFQAVSVAIQKSG-FKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWL 180

Query: 203 GLIPAAYVTVKAGLTLGELQSV 224
           G++P  +  V  G TL +L  +
Sbjct: 181 GMMPITFALVYVGTTLKDLSDI 193

The following BLAST results are available for this feature:

BLAST of CmoCh19G002400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L586	5.2e-83	60.17	Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8MXN7	3.2e-48	42.06	Transmembrane protein 41 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G02...	[more]
Q5ZIL6	1.6e-39	37.23	Transmembrane protein 41B OS=Gallus gallus OX=9031 GN=TMEM41B PE=2 SV=1	[more]
Q5BJD5	1.6e-39	37.23	Transmembrane protein 41B OS=Homo sapiens OX=9606 GN=TMEM41B PE=1 SV=1	[more]
Q5U4K5	2.7e-39	39.70	Transmembrane protein 41B OS=Xenopus laevis OX=8355 GN=tmem41b PE=2 SV=1	[more]

BLAST of CmoCh19G002400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HL58	1.8e-134	100.00	uncharacterized membrane protein At4g09580 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HU39	2.2e-132	98.81	uncharacterized membrane protein At4g09580 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0LI03	5.7e-125	92.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901130 PE=4 SV=1	[more]
A0A1S3CQ67	2.9e-124	92.89	uncharacterized membrane protein At4g09580 OS=Cucumis melo OX=3656 GN=LOC1035035...	[more]
A0A6J1E3I6	7.3e-120	89.72	uncharacterized membrane protein At4g09580 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CmoCh19G002400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17790.1	5.0e-105	78.99	SNARE associated Golgi protein family	[more]
AT1G71940.1	3.8e-89	64.32	SNARE associated Golgi protein family	[more]
AT4G09580.1	3.7e-84	60.17	SNARE associated Golgi protein family	[more]
AT1G71940.2	5.4e-83	66.36	SNARE associated Golgi protein family	[more]
AT1G03260.1	1.2e-05	24.26	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 95..214 e-value: 2.8E-19 score: 69.7
None	No IPR available	PANTHER	PTHR43220:SF13	SNARE ASSOCIATED GOLGI PROTEIN-RELATED	coord: 4..252
IPR045014	Transmembrane protein 41A/B	PANTHER	PTHR43220	FAMILY NOT NAMED	coord: 4..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G002400.1	CmoCh19G002400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane