CmoCh19G002310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Homeodomain-like superfamily protein
Location	Cmo_Chr19: 1590103 .. 1595192 (-)
RNA-Seq Expression	CmoCh19G002310
Synteny	CmoCh19G002310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCATTTCTTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTAAACTTCCATCAAAATCCCAAAGAAAAGAGGAAAAAGAAGAAGAACCCACCAATCTCCTCTCAATTCCCTTCAAAACTCATATTCACACTTCTCCAACAAATCTCTAAATCTCGAGAAAAATACGAATCAAGAACGACGACGAAGACGAAGAAGGAGAAGAAGCAAGAACAAAACTTTATGCGTATGGAGCTATTCCCAGCACAGCCAGATTTATCCCTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCTTCTTGGATAACAACGCCTTCTCAAGAAGAAGTTGATTTGAGGTTTTGGAATAATCTTAGTTTGGAGTCCACTAAATCCACTCCCAAACACCCCCCTCCACCTCCGCCTCCTAATCATCATCTTCTTCATCATCATCATCATATCTCCGCTCCCCTTTTCGAAACCCTAAACAAAACCCAACACCGACCCGCCATTTTCCACCACGATACGACATCGCTGCTCAACCCGCCACCACCGCCTCCCCCGCTCCCGTTTCCAGGATTCTTGCAACCCATTAGAGGAATTCCGGTGTACCATCAAACAATTAACCCCTCCGGCATCGGTGTCGATGGTGGCCGAGGCATTACTCCCTCTTCCGTCGACCACCGCCAGATTATGATGCGGTCGAGGTTCTTGTCTAGGTTTCCAGCCAAACGAAGCATGAGAGCCCCACGGATGAGATGGACATCAACTCTTCACGCTCGCTTCGTTCATGCCGTCGAACTTCTCGGCGGCCACGAAAGTACGACGGCCCTCTAATTTCTTCCCCTTTTGTTCAAATTCGAAGTTGATGGGTTACGATAAATTTAATCATTTATTCATATTCTCGACACAATCAGGAGCCACACCGAAGTCAGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGGTACATAACTCATAAATCTTTCAACAAAAAAAAAATTGCTCAAAAACACAATTTAGGGTTAAGTTTTGGTAAGAAAATAAGAATCCCAATGGTTTAGCATTGTTGTTACATCCTTAATTAATACAGACAGAAATCAAGGTTGTTTTTTTAAGAACATGTTTGGTTTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTAATTCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTCAAATTCCAATGTTTTTTTTTTTCTTCTTTAAAAATGCTCTGCAAAATGGCTCAAATTCTTAGCTTTTATTTTTCTTCTAGATCTGATGGTTCTGCTTCTGCTAGCTAACAAACAGCTTTTTGCTTGGGAGAATGAGCCATACCAACTATGAGTAAAATAAAATAAAATTCAATTCAATTCAATTAAAATTTTTAATTTTTTTTTTTATTAATTCATCTGAACACATGCACACAAGACAAGGTAGCTCAGAGAAGACTGTTCTCTTCGATGAATAAATGAGAGCAGCTGTTCAAATTTAATGTAGATTAAATGTTTTTTACATCATTAAAATCTTCAAAACATTTGAGATAATTGTCTGTGTTTTGTGAACAAAACATAGATTTGTTCTTGATTTCTCTGTCTTTTTTATTATTATTTTTTTGGAATTTTTGTTTAAATTATCCAATAAAAACTCATAATTTGATTAAATATATATATATATATATATATATATATATATATTTATCTATTGCAGATGTACAGAACAGTGAAGACTACAGACAGAGCTGCAGCTTCTTCAGGTGTGTTTTTTTTATAAAAAAAAAGTATATATTTTTTTCTTTTTAAATCGTTTTTTAAAGTTTTTTTATTGAATATTTTTATAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGATATTCAAAAGCCAGCCACGGGAAGGCAAAATGAGAGCTTAGTTCATCAAACAACAAGGCAAAACCCTCTTCAAGACGAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGTGATAATTCAATTCTTGTGCCTTTTTTTTTGTTTTCTCGACACAATTATGAGAAGATTCGAACCTAGGAAATACGAAAGATGTTAAATCGTAAATTGTGAGATCCTACATCGGTTTGGGAGGAGAATGAAGGATTCTTTATAAGGGTGTGAAAACTTTTCCTTAGCAAACGTTTTAAAAACGTTGAGGAGAAGCTCGAAAGGGACCGCCCAAAGAGGACAATATTTGCTAGCGGTAAACTTGGGTTGTTACATAATCTATCTGATATCTTAAGTTTAATGGGTTACTGTAAACTTAATTACCGTAATCCATTCAACTTAGGAAGTAAGAAAGACGTTAAATCATAATCTGTGAAATCTCACACCGGTTGGGGAGAAGAACGAAACATTGTTTATAAGGGTGTGGAAATCTCTCCCCTAGTTGAGGGGAATTTGAAGGAGACAGGGACCAAACAGTACAATATTTGCTAGGAGTGAACTTGGACGGTTACATAATCTTTGTGATATCTTAAGCTTAATGGGGTATGGTAAACTTAGTTATGTCAAAATAATTTTAAATGGGTTGGGGAGAAGAACGCAACATTTTTTTATAAGGGTGCGGAAACCTTTCTCTAACAGATGAGTTTTCAAAACTTTGAGGGAAAACTTAAAAAAGACAATATCTGTTAGTGGTGAACTACATAATCTATTTGAAATCTTAAGCTTAATGGGTTACGGTAAACTTAGTTAGGTCAAAATTACTTTAAACGGGTTCGAACAAGAACGGATCGACCAGCTCAAGAACTTAAATCAACCAATAATGATGAGGCAATTATGAACATAGTCTCTTAAAATGGATGAAAAGGATGTAAAAAGAAAGCACACGAACTCCCTAATTCCAAGAGAGAGAGGGAGAAATCTCCATGTTTTGGATTTTGTGGGGCTCAAATATGGAGACTTTATTCAAATGGGACCTGCAATAAGAAACTTAGTGCCAAAGCTAAGCCCTTTTGATGGACCCATTAGTGGAAATTTTGGTGCCTAAAAACAAAGCTTTTTTATCTTTGTTCTTTTGAATATGGAGTTTGCAAATTCCTCGTAGTTTGTGGGTTTAGTAATGGGTTATCACATGGGGCTGGTGTTGCTTTTTTATCAATCAAAAGCACCAAATGCAAAGTGAAAAAAGATTTGTAGCTTTCTTTTTCCTTCACTTTTCTTGCTTTGCATGCTCTAATTTGAAAACTATGCTCCCTTTCTTGCTTTGTTTATGTTAATAGGGAAGCTTGGTTGCATGGTTTGCCAAACGATTCTTCTCGGGACCTTTCTTCGTCCCTCGAGGTACTCTATTTTATCTCCCCTATCTTTCGATATGATATATTGTAGGAGATAAAGTTTGATCTTGCATTATTGAAGAATATGAAGTAAAACTCTGATCTTATTCGATATTATCTTCACCTGAATTATTATGTTATTCAGGAATCTGAAGTAGAACCCTGATCTTATTCGATATTATTCTTAGTTCGAGTTATTACGTTATTGAAGAATCTGGAGTAGAACCCTGATCTTATTTGATATTATTCTTAGCTCAAGTTATTACATTGGTGAAGAATTTGCAGTAGAACCCTAACCCCTTGATCTTATTTGATATTATTCTTAACCCGAGTTTATTGAAGAATTTGAAATAGAAACCTGATCTTATTCAATGTTATTCTTAACCCGAGTTATTACGTTATTGAAGAATCTGAAGTAGAACCCTAATCTTATTCGATATTATTCTTAGTTCGAGTCATTACGTTATTGAAGAATCTAATGTAGAACCGTGATCTTATTTGATATATTCTTAGCCCGAGTTATTACATTGTTGAAGAATCTGCAGTAGAACCCTGATCCCTGATCTTATTTGATATTATTCTTAGCCTCAGTTATTATGTTATTGAAGAATTTGGAGTAGAACCCTGATCTTATTCAATGTTATTCTTAGCCCGAGTTATTACGTTATTGAAGAATCTGAAGTAGAACCCTAATCTTATTCGATATTATTCTTAGTTCGAGTCATTACGTTATTGAAGAATCTGACGTAGAGCCCTGATCTTATTTGATATTATTCTTTGCCCGAGTTATTACATTGTTGAAGAATCTGCAATAGAACCCTGATCCCTGATCTTATTTGATATTATTCTTAGCCCGAGTTATTACATTATTGAAGAATTTGGAGTAGAACCCTGATCTTATTCAATGCTATTCTTAGCCCGAGTTATTACGTTATTGAAGAATCTGAAGTAGAACCCTAATCTTATTCGATATCATTCTTAGTTCGAGTCATTACGTTATTGAAGAATCTGATGTAAACCCTTATCTTATTTGATATTATTTTTTGCCCGAGTTATTACATTGTTGAAGAATTTGCAGTAGAATCCTGATCCCTGATCTTATTTGATATTATTCTTAGCCCGAGTTATTACATTATTGAAGAATCTGAAGTAGAACCCTAATCTTATTCGATATTATTCTTAGCTCAGGTTACTTGTTAGATTTTTGTTGTTTGAAGTGAAGTTACAAAGCCTGTTTGGATTGACTTACTATGTATTTGAAGCGTAATAAAATTTTCTTAATTGATTCACAGAATGATACGGATCTGAAGTGCTCAAATAACGAGAGACTATCGGAAAGAAGCTCATCGTCCGATGATTGTGGAGGGACAAACTCTCACAAGCCAAATTTAGAATTCACATTAGGAAGGCCAATTTGATGAACGCAAACAAAGAGATTGGTTAGTTTTCTACTCATTTTGAGATATGATTATATCTTAGAACAGAAATTGAAGTGTAAGAAAAGAAAGCTAAAGAAAAGCAGCTCCTAATTTCTATCAACCTTTGAGCTCCCAAATCAAAA

mRNA sequence

TCTCATTTCTTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTAAACTTCCATCAAAATCCCAAAGAAAAGAGGAAAAAGAAGAAGAACCCACCAATCTCCTCTCAATTCCCTTCAAAACTCATATTCACACTTCTCCAACAAATCTCTAAATCTCGAGAAAAATACGAATCAAGAACGACGACGAAGACGAAGAAGGAGAAGAAGCAAGAACAAAACTTTATGCGTATGGAGCTATTCCCAGCACAGCCAGATTTATCCCTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCTTCTTGGATAACAACGCCTTCTCAAGAAGAAGTTGATTTGAGGTTTTGGAATAATCTTAGTTTGGAGTCCACTAAATCCACTCCCAAACACCCCCCTCCACCTCCGCCTCCTAATCATCATCTTCTTCATCATCATCATCATATCTCCGCTCCCCTTTTCGAAACCCTAAACAAAACCCAACACCGACCCGCCATTTTCCACCACGATACGACATCGCTGCTCAACCCGCCACCACCGCCTCCCCCGCTCCCGTTTCCAGGATTCTTGCAACCCATTAGAGGAATTCCGGTGTACCATCAAACAATTAACCCCTCCGGCATCGGTGTCGATGGTGGCCGAGGCATTACTCCCTCTTCCGTCGACCACCGCCAGATTATGATGCGGTCGAGGTTCTTGTCTAGGTTTCCAGCCAAACGAAGCATGAGAGCCCCACGGATGAGATGGACATCAACTCTTCACGCTCGCTTCGTTCATGCCGTCGAACTTCTCGGCGGCCACGAAAGAGCCACACCGAAGTCAGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGATGTACAGAACAGTGAAGACTACAGACAGAGCTGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGATATTCAAAAGCCAGCCACGGGAAGGCAAAATGAGAGCTTAGTTCATCAAACAACAAGGCAAAACCCTCTTCAAGACGAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTGCCAAACGATTCTTCTCGGGACCTTTCTTCGTCCCTCGAGAATGATACGGATCTGAAGTGCTCAAATAACGAGAGACTATCGGAAAGAAGCTCATCGTCCGATGATTGTGGAGGGACAAACTCTCACAAGCCAAATTTAGAATTCACATTAGGAAGGCCAATTTGATGAACGCAAACAAAGAGATTGGTTAGTTTTCTACTCATTTTGAGATATGATTATATCTTAGAACAGAAATTGAAGTGTAAGAAAAGAAAGCTAAAGAAAAGCAGCTCCTAATTTCTATCAACCTTTGAGCTCCCAAATCAAAA

Coding sequence (CDS)

ATGCGTATGGAGCTATTCCCAGCACAGCCAGATTTATCCCTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCTTCTTGGATAACAACGCCTTCTCAAGAAGAAGTTGATTTGAGGTTTTGGAATAATCTTAGTTTGGAGTCCACTAAATCCACTCCCAAACACCCCCCTCCACCTCCGCCTCCTAATCATCATCTTCTTCATCATCATCATCATATCTCCGCTCCCCTTTTCGAAACCCTAAACAAAACCCAACACCGACCCGCCATTTTCCACCACGATACGACATCGCTGCTCAACCCGCCACCACCGCCTCCCCCGCTCCCGTTTCCAGGATTCTTGCAACCCATTAGAGGAATTCCGGTGTACCATCAAACAATTAACCCCTCCGGCATCGGTGTCGATGGTGGCCGAGGCATTACTCCCTCTTCCGTCGACCACCGCCAGATTATGATGCGGTCGAGGTTCTTGTCTAGGTTTCCAGCCAAACGAAGCATGAGAGCCCCACGGATGAGATGGACATCAACTCTTCACGCTCGCTTCGTTCATGCCGTCGAACTTCTCGGCGGCCACGAAAGAGCCACACCGAAGTCAGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGATGTACAGAACAGTGAAGACTACAGACAGAGCTGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGATATTCAAAAGCCAGCCACGGGAAGGCAAAATGAGAGCTTAGTTCATCAAACAACAAGGCAAAACCCTCTTCAAGACGAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTGCCAAACGATTCTTCTCGGGACCTTTCTTCGTCCCTCGAGAATGATACGGATCTGAAGTGCTCAAATAACGAGAGACTATCGGAAAGAAGCTCATCGTCCGATGATTGTGGAGGGACAAACTCTCACAAGCCAAATTTAGAATTCACATTAGGAAGGCCAATTTGA

Protein sequence

MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPPPNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIPVYHQTINPSGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI

Homology

[Close]

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-73
Identity = 199/403 (49.38%), Postives = 235/403 (58.31%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSW----ITTPSQ--EEVDLRFW--------NNLSLE 62
           MELFPAQPDLSLQISPPN +KPSS+W     TT  +  EE+DL FW        ++L   
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWQRRRSTTDQEDHEELDLGFWRRALDSRTSSLVSN 60

Query: 63  STKSTPKHP----PPPPPPNHHLLHHHHH------------ISAPLFETLNKTQHRPAIF 122
           ST  T  HP          +H     HHH            +++  F T  + QH     
Sbjct: 61  STSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQFPTQQQQQHLQGFL 120

Query: 123 HHDTTSLLNP---------PPP------PPPLPFPGFLQPIRGIPVYHQTINPSGIGVDG 182
            HD  + L P         PPP      PPP  FP    P   IP    T +P+  G   
Sbjct: 121 AHDLNTHLRPIRGIPLYHNPPPHHHPHRPPPPCFP--FDPSSLIP-SSSTSSPALTG--N 180

Query: 183 GRGITPSSVD-------HRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLG 242
                 SSV        H Q + R+RF+ RFPAKRSMRAPRMRWT+TLHARFVHAVELLG
Sbjct: 181 NNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLHARFVHAVELLG 240

Query: 243 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSN 302
           GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTD+AAASSGQSD+YEN SSGD +N
Sbjct: 241 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYENGSSGD-NN 300

Query: 303 IEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLS 354
            +D +FD+ + +  R +E L       NPL  E  + LW+NSS EA LHG   D+  ++ 
Sbjct: 301 SDDWMFDMNRKS--RDSEELT------NPL--EKSNGLWTNSSGEARLHGKLIDNVAEIM 360

[Close]

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-41
Identity = 147/407 (36.12%), Postives = 192/407 (47.17%), Query Frame = 0


Query: 10  PDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPPPNHHL-L 69
           PDLSL IS P                ++     N  S ES++ + +        N  L L
Sbjct: 20  PDLSLHISLP----------------DIHQYHHNESSKESSRRSSQLENNNRSSNFELSL 79

Query: 70  HHHHHISAPLFETLN-KTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIPVYHQT 129
            HH+H +A +F   + +T + P   H++   +                +PIRGIPVYH  
Sbjct: 80  SHHNHPTARIFHCPDRRTLNLPHQQHYNNPIINGVHQRVDESEISNLHRPIRGIPVYHNR 139

Query: 130 INP-----SGIGVDGGRGITPSSV------------------------------------ 189
             P     S +   GG  +   S+                                    
Sbjct: 140 SFPFHQQNSSLPSLGGGDMDQISILNSSSGYNNAYRSLQSSPRLKGVPLHHHHHHNQYGV 199

Query: 190 -------------DHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHE 249
                         H   M+RSRFL + P KRSMRAPRMRWTS+LHARFVHAVELLGGHE
Sbjct: 200 VGSSDSSSPHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHE 259

Query: 250 RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIED 309
           RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT++ AASS  S   E   +G+     +
Sbjct: 260 RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPAASSDGSGEEEMGINGN-----E 319

Query: 310 IIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLSSSL 355
           +          + +++ +HQ T  +  Q       WSNSSRE W   L N+ S D+ + +
Sbjct: 320 VHHQSSTDQRAQSDDTSLHQETDISSTQPR-----WSNSSRETW--PLSNNCSSDIDTMI 379

[Close]

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-37
Identity = 139/375 (37.07%), Postives = 177/375 (47.20%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPP 62
           MELFP+QPDL L+IS     +         SQE  +      L  +S  S   +      
Sbjct: 1   MELFPSQPDLYLKISRRREEEQEKE-----SQELQEQEVERRLGFQSKASDLDN-----K 60

Query: 63  PNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIP 122
            +++L+H     S      +N  Q        D  S+               ++PIRGIP
Sbjct: 61  SSNNLIHTLQFTSNNEATKINSNQEHKESLDQDLRSIF-------------MMRPIRGIP 120

Query: 123 VYHQTI-----------NPSGIGVDGG-----RGIT----PSSVDHRQIMMRSRFLSRFP 182
           +Y   +           NP       G     R IT      ++ +R          RF 
Sbjct: 121 LYQNQVLDHYYYSSTSPNPFFFSEVNGQHASRRLITNPNCSFNLHNRHRRQAQPQPPRFT 180

Query: 183 AKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 242
           AKR +RAPRMRWT+TLHA FVHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQMYR
Sbjct: 181 AKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 240

Query: 243 TVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQD 302
           T+K+T++   SSGQSD      +G   N E            R+  +L            
Sbjct: 241 TIKSTEKPTTSSGQSD----CENGSQVNSE------------REARNLT----------- 300

Query: 303 EDYHALWSNSSREAWLHGLPNDSSR-DLSSSLENDTDLKCSNNERLSERSSSSDDCGGT- 355
                LW+NSS EA        SS  D+SS+     + +C +NERLS  SSS     GT 
Sbjct: 301 ----GLWNNSSSEARFQLKAKASSGVDISSNENEWKNRRCPSNERLSSDSSS---LTGTR 318

[Close]

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-36
Identity = 108/238 (45.38%), Postives = 124/238 (52.10%), Query Frame = 0


Query: 153 MRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 212
           + SRF+ + PAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA
Sbjct: 308 LASRFMPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 367

Query: 213 HVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGD------------------------- 272
           HVKSHLQMYRTVK+TD+ AASSG +D      SGD                         
Sbjct: 368 HVKSHLQMYRTVKSTDKPAASSGPAD----GGSGDEEFAGGGQAASGGGDSMCLRGGGGG 427

Query: 273 -----------TSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREA 332
                       S  E     +     G  ++S    T+             WSNSSR+ 
Sbjct: 428 GVAAAAFAEHGRSASEGAASSVGGGGGGDMDQSSAGNTSTTR----------WSNSSRDP 487

Query: 333 WLHGLPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRP 355
           WL    N  + D   S+   + +     E L    SSS          P+LEFTLGRP
Sbjct: 488 WLSS--NSCNMDAHRSVGLSSPI-----ENLEPCRSSSSQVSNHELSSPSLEFTLGRP 524

[Close]

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-29
Identity = 88/191 (46.07%), Postives = 106/191 (55.50%), Query Frame = 0


Query: 164 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 223
           KRS+RAPRMRWTSTLHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQMYRT
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 159

Query: 224 VKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDE 283
           VK TD+ +   G+ +        D +N E+     +   T   N S V +T R       
Sbjct: 160 VKCTDKGSPGEGKVEKEAEQRIEDNNNNEEA---DEGTDTNSPNSSSVQKTQR------- 219

Query: 284 DYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSH 343
              A WS              S++++S S+               +     D    TN H
Sbjct: 220 ---ASWS--------------STKEVSRSISTQAYSHLGTTHHTKDNEEKED----TNIH 258

Query: 344 KPNLEFTLGRP 355
             NL+FTLGRP
Sbjct: 280 L-NLDFTLGRP 258

[Close]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL
Match: A0A6J1HJG8 (probable transcription factor KAN2 OS=Cucurbita moschata OX=3662 GN=LOC111464115 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 9.6e-203
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPP 60
           MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPP
Sbjct: 1   MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPP 60

Query: 61  PPPNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRG 120
           PPPNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRG
Sbjct: 61  PPPNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRG 120

Query: 121 IPVYHQTINPSGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHA 180
           IPVYHQTINPSGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHA
Sbjct: 121 IPVYHQTINPSGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHA 180

Query: 181 RFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLY 240
           RFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLY
Sbjct: 181 RFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLY 240

Query: 241 ENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHG 300
           ENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHG
Sbjct: 241 ENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHG 300

Query: 301 LPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI 356
           LPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI
Sbjct: 301 LPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI 355

[Close]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL
Match: A0A6J1HU10 (probable transcription factor KAN2 OS=Cucurbita maxima OX=3661 GN=LOC111466854 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 6.9e-185
Identity = 337/356 (94.66%), Postives = 342/356 (96.07%), Query Frame = 0


Query: 1   MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPP 60
           MRMELFPAQPDLSLQISPPNTNKPSSSWITTP QEEVDLRFWNNLSLESTKSTPKHPPPP
Sbjct: 1   MRMELFPAQPDLSLQISPPNTNKPSSSWITTP-QEEVDLRFWNNLSLESTKSTPKHPPPP 60

Query: 61  PPPNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNP-PPPPPPLPFPGFLQPIR 120
            PPNHHL  HHHHISAPLFETLNKT+ RPAIFHHDTTSLL+P PPPPPPLPFPGFLQPIR
Sbjct: 61  SPPNHHL--HHHHISAPLFETLNKTRPRPAIFHHDTTSLLSPSPPPPPPLPFPGFLQPIR 120

Query: 121 GIPVYHQTINPSGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLH 180
           GIPVYHQTINPSGIGVDGGRGITPS+VDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLH
Sbjct: 121 GIPVYHQTINPSGIGVDGGRGITPSTVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLH 180

Query: 181 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDL 240
           ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDL
Sbjct: 181 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDL 240

Query: 241 YENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLH 300
           YENASSGDTSNIEDIIFDIQKPA GRQNESLVHQTTR    QD+DYHALWSNSSREAWLH
Sbjct: 241 YENASSGDTSNIEDIIFDIQKPAMGRQNESLVHQTTR----QDKDYHALWSNSSREAWLH 300

Query: 301 GLPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI 356
           GLPNDSSRDLSSSLENDTD KCSNNERLSE SSS+DDCGGTNSHKPNLEFTLGR I
Sbjct: 301 GLPNDSSRDLSSSLENDTDPKCSNNERLSEISSSTDDCGGTNSHKPNLEFTLGRSI 349

[Close]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL
Match: A0A1S4E5K0 (probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503571 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 4.1e-137
Identity = 288/408 (70.59%), Postives = 306/408 (75.00%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSW-----ITTPSQEEVDLRFWNNLSLESTKSTPKH- 62
           MELFPAQPDLSLQISPPNTNKPSSSW      ++ SQE+VDL FWNN      KSTPKH 
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSSWRSRTSSSSSSQEDVDLEFWNN------KSTPKHH 60

Query: 63  ----------------------------PPPPPPPNHHLLHHHHH------ISAPLFETL 122
                                        P P P +HHLLHH HH        A LFETL
Sbjct: 61  LHHLHPHSCFDLSLSNLTQINHHQYPNVSPSPTPNHHHLLHHRHHRYPVLESPAHLFETL 120

Query: 123 NKTQHRP-AIFHHDTTSLLNPPP---PPPPLPFP--------GFLQPIRGIPVYHQTINP 182
           NKT +RP AIFHH+T     PP     P P PFP        GFL+PIRGIPVYHQT NP
Sbjct: 121 NKTHNRPTAIFHHNT----QPPSSSLDPTPTPFPGQINGQDLGFLRPIRGIPVYHQTNNP 180

Query: 183 SGIGVDGGRGITPSSVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLG 242
           S +G   G  +TPS+ +H QIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLG
Sbjct: 181 S-VGTGNGGVVTPSAANHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLG 240

Query: 243 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSN 302
           GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSN
Sbjct: 241 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSN 300

Query: 303 IEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLS 356
           IEDIIFDIQKP  GRQNE+ + QT+RQNP QD+DYHALWSNSSREAWLHGLPNDSSRDLS
Sbjct: 301 IEDIIFDIQKPTIGRQNENSIQQTSRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLS 360

[Close]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL
Match: A0A6J1ETP5 (probable transcription factor KAN2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437460 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.6e-136
Identity = 281/388 (72.42%), Postives = 292/388 (75.26%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSW-ITTPSQEEVDLRFWNNLSLESTKSTPKH----- 62
           MELFPAQPDLSLQISPPNTNKPSS+W  TTPSQE +DL FWNNL+LES K TPKH     
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60

Query: 63  ------------------PPPPPPPNHHLLHHHH---HISAPLFETLNKTQHRPAIFHHD 122
                             PPPPPPP  H  HHHH   H  A LF+TL+KT H P IFHH 
Sbjct: 61  HFDLSLSNFTQINQYSNIPPPPPPPLPH--HHHHPAFHGGAHLFQTLHKTHHPPTIFHHT 120

Query: 123 TTSLLNPPPPPPPLPFPG--------FLQPIRGIPVYHQTINPSGIGVDGGRGITPSSVD 182
                 PPPP    PFPG        FL+PIRGIPVYHQT NP+G        I PS+  
Sbjct: 121 P-----PPPPTTSHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGT----PSPIAPSASG 180

Query: 183 HRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVK 242
           H QIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVK
Sbjct: 181 HGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVK 240

Query: 243 DLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQN 302
           DLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKP+ GRQN
Sbjct: 241 DLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQN 300

Query: 303 ESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDLKCSNNERL 356
           E  V Q  RQNP QD+DYHALWSNSSREAWLHG PNDSSRDLSSSLEND D K SNNERL
Sbjct: 301 EHSVQQ-NRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERL 360

[Close]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL
Match: A0A6J1K9Z3 (probable transcription factor KAN2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491441 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 1.0e-135
Identity = 280/387 (72.35%), Postives = 290/387 (74.94%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSW-ITTPSQEEVDLRFWNNLSLESTKSTPKHP---- 62
           MELFPAQPDLSLQISPPNTNKPSS+W  TTPSQE +DL FWNNL+LES K TPKH     
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNH 60

Query: 63  ------------------PPPPPPNHHLLHHHH---HISAPLFETLNKTQHRPAIFHHDT 122
                             PPPPPP   L HHHH   H  A LF+TL+KT H P IFHH  
Sbjct: 61  HFDLSLSNFTQINQYSNIPPPPPPPLPLPHHHHPALHGGAHLFQTLHKTHHPPTIFHH-- 120

Query: 123 TSLLNPPPPPPPLPFPG--------FLQPIRGIPVYHQTINPSGIGVDGGRGITPSSVDH 182
                PPPP    PFPG        FL+PIRGIPVYHQT NP+G        I PS+  H
Sbjct: 121 ----TPPPPTTSHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGT----PSPIAPSASGH 180

Query: 183 RQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKD 242
            QIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKD
Sbjct: 181 GQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKD 240

Query: 243 LTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNE 302
           LTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKP  GRQNE
Sbjct: 241 LTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPTMGRQNE 300

Query: 303 SLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDLKCSNNERLS 356
             V Q  RQNP QD+DYHALWSNSSREAWLHG PNDSSRDLSSSLEND D K SNNERLS
Sbjct: 301 HSVQQ-NRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS 360

[Close]

BLAST of CmoCh19G002310 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 7.6e-75
Identity = 199/403 (49.38%), Postives = 235/403 (58.31%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSW----ITTPSQ--EEVDLRFW--------NNLSLE 62
           MELFPAQPDLSLQISPPN +KPSS+W     TT  +  EE+DL FW        ++L   
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWQRRRSTTDQEDHEELDLGFWRRALDSRTSSLVSN 60

Query: 63  STKSTPKHP----PPPPPPNHHLLHHHHH------------ISAPLFETLNKTQHRPAIF 122
           ST  T  HP          +H     HHH            +++  F T  + QH     
Sbjct: 61  STSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQFPTQQQQQHLQGFL 120

Query: 123 HHDTTSLLNP---------PPP------PPPLPFPGFLQPIRGIPVYHQTINPSGIGVDG 182
            HD  + L P         PPP      PPP  FP    P   IP    T +P+  G   
Sbjct: 121 AHDLNTHLRPIRGIPLYHNPPPHHHPHRPPPPCFP--FDPSSLIP-SSSTSSPALTG--N 180

Query: 183 GRGITPSSVD-------HRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLG 242
                 SSV        H Q + R+RF+ RFPAKRSMRAPRMRWT+TLHARFVHAVELLG
Sbjct: 181 NNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLHARFVHAVELLG 240

Query: 243 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSN 302
           GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTD+AAASSGQSD+YEN SSGD +N
Sbjct: 241 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYENGSSGD-NN 300

Query: 303 IEDIIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLS 354
            +D +FD+ + +  R +E L       NPL  E  + LW+NSS EA LHG   D+  ++ 
Sbjct: 301 SDDWMFDMNRKS--RDSEELT------NPL--EKSNGLWTNSSGEARLHGKLIDNVAEIM 360

[Close]

BLAST of CmoCh19G002310 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-42
Identity = 147/407 (36.12%), Postives = 192/407 (47.17%), Query Frame = 0


Query: 10  PDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPPPNHHL-L 69
           PDLSL IS P                ++     N  S ES++ + +        N  L L
Sbjct: 20  PDLSLHISLP----------------DIHQYHHNESSKESSRRSSQLENNNRSSNFELSL 79

Query: 70  HHHHHISAPLFETLN-KTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIPVYHQT 129
            HH+H +A +F   + +T + P   H++   +                +PIRGIPVYH  
Sbjct: 80  SHHNHPTARIFHCPDRRTLNLPHQQHYNNPIINGVHQRVDESEISNLHRPIRGIPVYHNR 139

Query: 130 INP-----SGIGVDGGRGITPSSV------------------------------------ 189
             P     S +   GG  +   S+                                    
Sbjct: 140 SFPFHQQNSSLPSLGGGDMDQISILNSSSGYNNAYRSLQSSPRLKGVPLHHHHHHNQYGV 199

Query: 190 -------------DHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHE 249
                         H   M+RSRFL + P KRSMRAPRMRWTS+LHARFVHAVELLGGHE
Sbjct: 200 VGSSDSSSPHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHE 259

Query: 250 RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIED 309
           RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT++ AASS  S   E   +G+     +
Sbjct: 260 RATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPAASSDGSGEEEMGINGN-----E 319

Query: 310 IIFDIQKPATGRQNESLVHQTTRQNPLQDEDYHALWSNSSREAWLHGLPNDSSRDLSSSL 355
           +          + +++ +HQ T  +  Q       WSNSSRE W   L N+ S D+ + +
Sbjct: 320 VHHQSSTDQRAQSDDTSLHQETDISSTQPR-----WSNSSRETW--PLSNNCSSDIDTMI 379

[Close]

BLAST of CmoCh19G002310 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-38
Identity = 139/375 (37.07%), Postives = 177/375 (47.20%), Query Frame = 0


Query: 3   MELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPP 62
           MELFP+QPDL L+IS     +         SQE  +      L  +S  S   +      
Sbjct: 1   MELFPSQPDLYLKISRRREEEQEKE-----SQELQEQEVERRLGFQSKASDLDN-----K 60

Query: 63  PNHHLLHHHHHISAPLFETLNKTQHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIP 122
            +++L+H     S      +N  Q        D  S+               ++PIRGIP
Sbjct: 61  SSNNLIHTLQFTSNNEATKINSNQEHKESLDQDLRSIF-------------MMRPIRGIP 120

Query: 123 VYHQTI-----------NPSGIGVDGG-----RGIT----PSSVDHRQIMMRSRFLSRFP 182
           +Y   +           NP       G     R IT      ++ +R          RF 
Sbjct: 121 LYQNQVLDHYYYSSTSPNPFFFSEVNGQHASRRLITNPNCSFNLHNRHRRQAQPQPPRFT 180

Query: 183 AKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 242
           AKR +RAPRMRWT+TLHA FVHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQMYR
Sbjct: 181 AKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 240

Query: 243 TVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQD 302
           T+K+T++   SSGQSD      +G   N E            R+  +L            
Sbjct: 241 TIKSTEKPTTSSGQSD----CENGSQVNSE------------REARNLT----------- 300

Query: 303 EDYHALWSNSSREAWLHGLPNDSSR-DLSSSLENDTDLKCSNNERLSERSSSSDDCGGT- 355
                LW+NSS EA        SS  D+SS+     + +C +NERLS  SSS     GT 
Sbjct: 301 ----GLWNNSSSEARFQLKAKASSGVDISSNENEWKNRRCPSNERLSSDSSS---LTGTR 318

[Close]

BLAST of CmoCh19G002310 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-30
Identity = 88/191 (46.07%), Postives = 106/191 (55.50%), Query Frame = 0


Query: 164 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 223
           KRS+RAPRMRWTSTLHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQMYRT
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 159

Query: 224 VKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTRQNPLQDE 283
           VK TD+ +   G+ +        D +N E+     +   T   N S V +T R       
Sbjct: 160 VKCTDKGSPGEGKVEKEAEQRIEDNNNNEEA---DEGTDTNSPNSSSVQKTQR------- 219

Query: 284 DYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDLKCSNNERLSERSSSSDDCGGTNSH 343
              A WS              S++++S S+               +     D    TN H
Sbjct: 220 ---ASWS--------------STKEVSRSISTQAYSHLGTTHHTKDNEEKED----TNIH 258

Query: 344 KPNLEFTLGRP 355
             NL+FTLGRP
Sbjct: 280 L-NLDFTLGRP 258

[Close]

BLAST of CmoCh19G002310 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-29
Identity = 70/113 (61.95%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 164 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 223
           KRS+RAPRMRWTSTLHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQMYRT
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 159

Query: 224 VKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPATGRQNESLVHQTTR 277
           VK TD+ +   G+ +        D +N E+     +   T   N S V +T R
Sbjct: 160 VKCTDKGSPGEGKVEKEAEQRIEDNNNNEEA---DEGTDTNSPNSSSVQKTQR 209

The following BLAST results are available for this feature:

BLAST of CmoCh19G002310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C616	1.1e-73	49.38	Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 ...	[more]
Q93WJ9	1.4e-41	36.12	Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1	[more]
Q941I2	2.7e-37	37.07	Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 ...	[more]
Q0J235	2.3e-36	45.38	Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL...	[more]
Q9FJV5	2.7e-29	46.07	Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ...	[more]

BLAST of CmoCh19G002310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJG8	9.6e-203	100.00	probable transcription factor KAN2 OS=Cucurbita moschata OX=3662 GN=LOC111464115...	[more]
A0A6J1HU10	6.9e-185	94.66	probable transcription factor KAN2 OS=Cucurbita maxima OX=3661 GN=LOC111466854 P...	[more]
A0A1S4E5K0	4.1e-137	70.59	probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503571 PE=4 ...	[more]
A0A6J1ETP5	4.6e-136	72.42	probable transcription factor KAN2 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1K9Z3	1.0e-135	72.35	probable transcription factor KAN2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CmoCh19G002310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32240.1	7.6e-75	49.38	Homeodomain-like superfamily protein	[more]
AT5G16560.1	1.0e-42	36.12	Homeodomain-like superfamily protein	[more]
AT4G17695.1	1.9e-38	37.07	Homeodomain-like superfamily protein	[more]
AT5G42630.1	2.0e-30	46.07	Homeodomain-like superfamily protein	[more]
AT5G42630.2	2.2e-29	61.95	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 170..223 e-value: 8.1E-24 score: 81.7
None	No IPR available	GENE3D	1.10.10.60		coord: 169..226 e-value: 1.9E-26 score: 93.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..31
None	No IPR available	PANTHER	PTHR31496:SF3	TRANSCRIPTION FACTOR KAN2-RELATED	coord: 1..354
IPR044847	Transcription repressor KANADI	PANTHER	PTHR31496	TRANSCRIPTION FACTOR KAN2-RELATED	coord: 1..354
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 167..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G002310.1	CmoCh19G002310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding