CmoCh19G001930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G001930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	E3 ubiquitin-protein ligase CHIP-like
Location	Cmo_Chr19: 1241081 .. 1246865 (+)
RNA-Seq Expression	CmoCh19G001930
Synteny	CmoCh19G001930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCCGGGCGTGTTCTTGTCTGGCGCTGCAAGACAGGCCGAGATTCTCAGAAAAGATGGAAATCACTATTTCCAGAAGGGCCGGATTGGAGCCGCCATTGAAGCCTATACCGAGGTTTCTTCCTGTCTCTCGAATTGTTCTTTCTGGTCGCTATTTGGCTATCAAAATCGAATTATTTGGGATATTCTTGTTGTTTTTGATTTGAAGGCGATTACGCTATGTCCGAATGTTCCTGTGTATTTGACGAACCGTGCTTTGTGTCATCGCAAGCGGAAGTATGTACGGGCACCTATCCTTGCCCCATTTTCTTCCTTATTACGGAGATAATGAGAATTTATTGTTATGATGTGTTGTTTTTAATGGTGTGTAGTGATTGGAAGAAGGTGGAGGAGGACTGTCGGAGAGCTATTCAGCTTGACAACAATTCTGTCAAGGTACTATTCTATAAACCTTGAAATTTTGGTTTTGATTCTTAGAGTTCGATATGGATGTGTTGATGAAGACGCTTCCCGTGATACTTACAAAAGACCTTTCCAATTTACAATGAGAGAGGTTTATGACTTCTTACTGACCTTGTCCATACTAGAAAGCTATTTCGTTAAGTTTGCTTCTTGGGACAACCCAATTGGGTAAGGTCAAGGCTTAATTCGGCCTAGTCTATAGCTTCGTTTAGGTTCTTACCAAGCTTTAGGTCCTAGTATTTGTTGACATCTTTCCATGTTTCTTTGGTTGTGACTGTCTTGCAATGAGAGAGTCTGTACAAACGAGAATATTGCAAAGCTAACGTGGTGTTGTCAATCCAAGGGTTAGTCTAGAAAGATGTGTTTCCTCCACCACCCACTCTATGGCGAATGCGGTTGATGATGAGGTTTTGGTACTCTTTTAGATGCTTCCATGCCCCCTTTGTAGAATGTGGGGGGACTCATTTGTACCTGATGTAGGAGCATGTAGATATCCATTTGGCGAGGAGGGCTCTCTTCTTTTTCTTCATTGAATATAGCCCAAGACCTCCCTTGTCTAGTTGGAGGTTTATGATATTTCATTGAACAAGACGTGAGCCATTTTTCACTGATAGTTTTTGAATAATCTTTTTATTTCCAGAGCCATTTTGTGAGGCATTTCGAGTAGAGACATGTAGTTAGTAGGAATGTTCAACCATGTGGTTTATATAGGGAGAGCCTTCCGCCTTTGGAAGTATAGCATAATGATCATGTCGATGACCTTCCTATTTTTTTCAATAATGGTCCTCTAAAAGGAGAAGGATTTGAGGTTTTCATTTAGGGACAATCTCATGTACATATTTGGCCTTTCACCTTTTTTACCGCCATATCTTTTGGCAAAGTCGTCGATATCCTTTGTGCTAACATTGACCAACGATCTTTATTTTTTGGAGGTTGATGTTTTTTCTCGAGAATCTTTCGAAGGTTTTCACTGTTCCAGACATGTTAATTACCAACATGGAAGCCATTTATTTGCTTTACGTATTCTACCTTGTTGAGTAAGAGATTAAGGCAATCTAGTACTATAATGAAAAGAAAAGAGGATAGTGGATCTTCTTGTCGAAGACCTTGTGTAGCATAGATCTTCTTTCTCGGTCATCCATTAATGATGATCGAGAAGATCCTTTTATCCACCCGCCATTTTGAGCAAAAGTCTTTTGTTTTAAGAATGTTGTCGAGCAAAACCCAAACAACCTTGTCGAAGGCTTTTTCTAGGTCAAATTTGACGAATACACCTTTTTGTTTCCTCTTTTTCCATTTGTCTATAAGCTCATTTGCATGAAGGATGCATCAAGGATCTAACATCCCTGTACAAATGTTGTTTGTTGCCTAGTGACGGTGAAAGGGAGAACTCTTTTGAGGCGTTCTAATAAAACCCTTGCTATAATTTTGTATAGTCGTGTTGTAAGACTTATCTTCTTTGAGATCAAGCATATATATACTTTTCATTTAGAATTTTTTTTGGAACACCCTCATGATATCGGTTCTCAAAAAGTTCCAAATATTTTTTAAAGAATTAGGAGGTAAAACCACTTGATCCAGGAGTTTTGTCAGAGCTCGAGATTTTTATCGCCTTCCATACCTCTTCTTTGATGAATGCAAACTCAAGGGAGGTTGCTTGGCGATGATCAGTTGGGCTCCAATCAAGATTATCAAGAAATTCGGTGAGGGTGTCGTCCTTTTTATATATGTGTGTTAAGAGGACATGAATTTTGAGACCATTTCATCTTCATTGATGAAACTTCTGCCTTGGGTCGATAGACTTTCTATGATGGTACTATTTCGTTTCTTTGAGGTCATGATACGATGGAAAAATCTGGAGTTTTTTACACTTATGTCTTCGAGATTGCACTTTATTTGCTACCAATGATATGAATTCAGCTTTCATGAGCTTCTTATGTGTGTTGAACTAATGTGATAGGGTCGGTTTCTTCCATTCGATCAAAAATAGTAATTTTTGTAAGTAGTTGGTTTGTTTTTGTGGAAATACAACCGAAAACCTCGTTCCGTTAGTTCAATAATGAATTTGTGTCTAACCATCCACGGAGGGGAGTGTTCTTCCACCAGTATTCTATCGTAGGCAGAAAATTAATGTGATCTAACCATATATTCTCAAAATGGAAGGTCGAGGAGCACCATTTGAGGCAACCTATGGAAAACACAACGGGATAATGATTCGATGTAGGTCTATTTAGTCTCAAACATGAGCAATACTAAATTTTCCCCAGAGGCCTTCAATAGCTAAAAATTTGTCGATGAGTGTCAAGGTAGGTGTGAATCTGTTGTTTGACCAAGAATAATATAACAGCCGAGCCCACCGCTAGCATATATTGCCTGCTTTGGCTCATTACATATCATCGTCAGCCTCACGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCTACACCCTTATAAGGAATGCTTTGTTCCTTCTCCAACCGACGTGGGATCTCACATATAAAGATCATTGCTGCGGGGATGATCAGTGAGTTCAACCGTTCTTATGAAATTATTGAAATGTCTCATGCCTCTAGTGACTTTTCCGCTAGATTTTTCATGTGCCTAGAAGTCGTAGACCAAAAGCCAATTTTATGTGCAAATGCCAGAGAGGTCCTGTAATTTCTTGGTATTTTTCCGGTGTCCAACGAATATCGGAGAGTTAGTCTCTATTGCATGTTGCCCGAACTAACGTGCTTGTGCTTCTCATTATATATATATATATATATATATTTTTTTTTTTCCTTTCCTTTATTTATTTGTTCTTACATTTGTTGGCAATTTTTGATGTGCAGGCACATTACATGGTAGGATTAGCATTAATACAAAACAAAGACTATCCTGAAGGAATCAAGCATTTGGAGAAGGTAGCTCTTCATTAACTTCTCTCTAATTTTTGTAGCATTTAAACAAAGATCTCTGATGGTACACTACACAACTCGCCTATGATCCACGGATACTCTCGTTTTAGGGGACTTTCAAATATAGACTCTCGATTCGTATACATCGAGTGAGCGTATAGTTTATTATGCTGACACAAATTTAATTCGACCTCGTGTTTTATAGGCTTTGGATCTTGGTAGAGGTGCAAATCAAAAGAGTTATATGGTAGAGGAGATATGGCAGGAGCTTGCAAATGCAAAATACAGGGAGTGGGAACAAGCATCCACCAAACGTTCATGGGAATTGCAGACCTTGAAGTAAGTTATTTTTCTCCTAGAGCTTTTGGTTTTGAGGGTTGGAAGCCTTCAAATAAGTTTTCTTTCGTGAAGATGTCGATAATGATTGTGAAATCCCACCTTGGTTGGAGAGGGAACGAAGCATTTGTTATAAAAGTGTGGAAACCTCTCCCTACAGACGAGTTTTAAAACTATGTTGACGGCGGTACGTAATGGGTGAAAATGGACAATATCTGTTAGAGGTAGGCTTGGGCTGTTACAAATGGTATTAGAGCCAGATACCGGGCGGTGTGCCAGCGAGAACGCTGGGCCCCCCAACAGGGGTGAATTATGAAATCCCACGTCGTTTGGAGAGAGGAACATAGTATAACTTATAAAGGTGAGGAAATCTCTCCCTAGCAGACGTGTTTTAAAACCGTAAGGTTGACGGTTATACGTAATGGGCGAAAGCGGACAATATCTACTAGTGGTAGACTTTGGTTGTTACAAATTGTATCAGAGCCAGACACCAGGCAGTGTGCCAACGAGGATGCTGGGCCCCCCAACGAGGGTGGATTGTAAAATCCCACATCGGTTGGAGAGGGGAACAAAACACTTCTTATCAAAGTTTGGAAACCTCTCCCTAGAAGATACATTTTAAAACTGTGAGGCTGACGGCAATATGTAACGAGTGAAAGCGAACAATATCTGCTAGCAGTGGACTTAAGCTGTTACAAATGGTATCAGAGCCACACACCGGGCGATGTGCCAGCAAGGACGTTGGGCCTCCAAGGGGGGTAGATTGTGAAATCTCACATCGGTTAGAGAGGGGAACGAAACATTCCTTATGAAGGTGTGGAAACTTCTCCCTAGCGGGCGTGTTCTAATAAAACCATGAGGCTGACGGCAATACGTAATGGGTAAAAGCGGACAATATCTGTTAGCGGTGGGCTTAGGTTGTTATGAATGGTATCAGAGTCGGCCACCAAGCGGTGTGCTAGCGAGGACGCTGGGCCTCCAATGAGAGTGGATTGTGAAATCCCATCTCAGTTAGAGAGAGGAACGAAACATTCCTTATAAAGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGTGGTACGTAATAGGCAAAAGCGGACAATATTTGCTAACGATGAGCTTGGACCGTTATAGATTAGATATTAAAAAAGAAAGAAAGACGGGTTTCTTTGGTTGTGATCTATGTTACTATTTCTCAGAGAGGCTTGTGAGGCTGCACTTGAACAAAAATACTTCCTTGACCAGTCTGAACCAGAAGGGTTCGTAGATCAAGCCGAAAGCGCTCATCGGGAACAATTAAACTCTCTAAGAAGTGTGTTTGAAAACTATGCCGTGGCTGATGCGCCATCTGAGGTTAAGCATTTTGACATAACACTAGCCATTTAAATCCTGTGAAGGTACTAATTTGATGTTTTTTCAGGTCCCCGATCATCTTTGTTGTAAAATTACGCTCGATATTCTTCGTGATCCCGTTATTACTCCAAGCGGGGTTACATATGAGAGAGCAGTGATCCTCGACCATTTTCGAAAGGTCGGCATTTTCCACGTTGCTATCCTACTCGTTCATGTCCTATAGCTACAATTCTAACTACTGGCTTCCTTGTTTAGGTTGGTAACTTCGATCCCATAACGCGGGAGCTACTCGACGAGTCTCAGCTAGTACCGAACTTAGCCATAAAGGAAGCTGTACAGGCATTTCTAGATAAGCATGGATGGGCTTACAATACAAATTAAGTATACATGAGGTCTTGTCTTTTGATTTGCTGTTCTGCAATTTGTTACCATGGCTGGTTAGTTTCCTGTACAGTTATTACTTAAACCTCATAATCGATGATATATGTCTTTACTAATCTCGTCGGGTACACCTTTCACATTCAAATGGACGTTTTCCAGATGGAAATCATAACTTACATAGTAGGAATGTCGAGCACAAGGGTAATGATTAAGCTACCACTCGAAGGCTAGTTTAGCATGCTTTCTACTTGATTTATCTTTTATGTTCGAGTGCTACTAATAAAGAGAAAAAATTTGAATCTCGACCTCAAAAGAACTATTACTTTGATTGGAG

mRNA sequence

ATGGGGCCGGGCGTGTTCTTGTCTGGCGCTGCAAGACAGGCCGAGATTCTCAGAAAAGATGGAAATCACTATTTCCAGAAGGGCCGGATTGGAGCCGCCATTGAAGCCTATACCGAGGTTTCTTCCTGTCTCTCGAATTGTTCTTTCTGGTCGCTATTTGGCTATCAAAATCGAATTATTTGGGATATTCTTGTTGTTTTTGATTTGAAGGCGATTACGCTATGTCCGAATGTTCCTGTGTATTTGACGAACCGTGCTTTGTGTCATCGCAAGCGGAATGATTGGAAGAAGGTGGAGGAGGACTGTCGGAGAGCTATTCAGCTTGACAACAATTCTGTCAAGGCACATTACATGGTAGGATTAGCATTAATACAAAACAAAGACTATCCTGAAGGAATCAAGCATTTGGAGAAGGCTTTGGATCTTGGTAGAGGTGCAAATCAAAAGAGTTATATGGTAGAGGAGATATGGCAGGAGCTTGCAAATGCAAAATACAGGGAGTGGGAACAAGCATCCACCAAACGTTCATGGGAATTGCAGACCTTGAAAGAGGCTTGTGAGGCTGCACTTGAACAAAAATACTTCCTTGACCAGTCTGAACCAGAAGGGTTCGTAGATCAAGCCGAAAGCGCTCATCGGGAACAATTAAACTCTCTAAGAAGTGTGTTTGAAAACTATGCCGTGGCTGATGCGCCATCTGAGGTCCCCGATCATCTTTGTTGTAAAATTACGCTCGATATTCTTCGTGATCCCGTTATTACTCCAAGCGGGGTTACATATGAGAGAGCAGTGATCCTCGACCATTTTCGAAAGGTTGGTAACTTCGATCCCATAACGCGGGAGCTACTCGACGAGTCTCAGCTAGTACCGAACTTAGCCATAAAGGAAGCTGTACAGGCATTTCTAGATAAGCATGGATGGGCTTACAATACAAATTAAGTATACATGAGGTCTTGTCTTTTGATTTGCTGTTCTGCAATTTGTTACCATGGCTGGTTAGTTTCCTGTACAGTTATTACTTAAACCTCATAATCGATGATATATGTCTTTACTAATCTCGTCGGGTACACCTTTCACATTCAAATGGACGTTTTCCAGATGGAAATCATAACTTACATAGTAGGAATGTCGAGCACAAGGGTAATGATTAAGCTACCACTCGAAGGCTAGTTTAGCATGCTTTCTACTTGATTTATCTTTTATGTTCGAGTGCTACTAATAAAGAGAAAAAATTTGAATCTCGACCTCAAAAGAACTATTACTTTGATTGGAG

Coding sequence (CDS)

ATGGGGCCGGGCGTGTTCTTGTCTGGCGCTGCAAGACAGGCCGAGATTCTCAGAAAAGATGGAAATCACTATTTCCAGAAGGGCCGGATTGGAGCCGCCATTGAAGCCTATACCGAGGTTTCTTCCTGTCTCTCGAATTGTTCTTTCTGGTCGCTATTTGGCTATCAAAATCGAATTATTTGGGATATTCTTGTTGTTTTTGATTTGAAGGCGATTACGCTATGTCCGAATGTTCCTGTGTATTTGACGAACCGTGCTTTGTGTCATCGCAAGCGGAATGATTGGAAGAAGGTGGAGGAGGACTGTCGGAGAGCTATTCAGCTTGACAACAATTCTGTCAAGGCACATTACATGGTAGGATTAGCATTAATACAAAACAAAGACTATCCTGAAGGAATCAAGCATTTGGAGAAGGCTTTGGATCTTGGTAGAGGTGCAAATCAAAAGAGTTATATGGTAGAGGAGATATGGCAGGAGCTTGCAAATGCAAAATACAGGGAGTGGGAACAAGCATCCACCAAACGTTCATGGGAATTGCAGACCTTGAAAGAGGCTTGTGAGGCTGCACTTGAACAAAAATACTTCCTTGACCAGTCTGAACCAGAAGGGTTCGTAGATCAAGCCGAAAGCGCTCATCGGGAACAATTAAACTCTCTAAGAAGTGTGTTTGAAAACTATGCCGTGGCTGATGCGCCATCTGAGGTCCCCGATCATCTTTGTTGTAAAATTACGCTCGATATTCTTCGTGATCCCGTTATTACTCCAAGCGGGGTTACATATGAGAGAGCAGTGATCCTCGACCATTTTCGAAAGGTTGGTAACTTCGATCCCATAACGCGGGAGCTACTCGACGAGTCTCAGCTAGTACCGAACTTAGCCATAAAGGAAGCTGTACAGGCATTTCTAGATAAGCATGGATGGGCTTACAATACAAATTAA

Protein sequence

MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRIIWDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQAFLDKHGWAYNTN

Homology

[Close]

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot
Match: Q9SRS9 (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana OX=3702 GN=CHIP PE=1 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.7e-94
Identity = 175/300 (58.33%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 10  AARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRIIWDILVVFDL 69
           A+  AE L++DGN+ F+K R GAAI+AYTE                              
Sbjct: 6   ASAMAERLKEDGNNCFKKERFGAAIDAYTE------------------------------ 65

Query: 70  KAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDY 129
            AI L PNVP Y TNRALCH KR DW KVEEDCR+AIQL +NSVKAHYM+GLAL+Q K++
Sbjct: 66  -AIALSPNVPAYWTNRALCHMKRKDWTKVEEDCRKAIQLVHNSVKAHYMLGLALLQKKEF 125

Query: 130 PEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTLKEACEAA 189
             G+K L++ALDLGR +N   YMVEEIW+EL+ AKY EWE  S  RSWEL +LKE CEAA
Sbjct: 126 TNGVKELQRALDLGRCSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAA 185

Query: 190 LEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLCCKITLDILR 249
           L Q+  LD S  E   D+A +AH E+L +L  VF+  A  D P+EVPD+LCC ITL+I R
Sbjct: 186 LNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFR 245

Query: 250 DPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQAFLDKHGWAY 309
           DPVI+PSGVTYERA IL+H +KVG FDPITRE +D + LVPNLAIKEAV A+L+KH WAY
Sbjct: 246 DPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEKHVWAY 274

[Close]

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot
Match: Q9UNE7 (E3 ubiquitin-protein ligase CHIP OS=Homo sapiens OX=9606 GN=STUB1 PE=1 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-38
Identity = 90/251 (35.86%), Postives = 141/251 (56.18%), Query Frame = 0


Query: 70  KAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDY 129
           +AIT  P V VY TNRALC+ K    ++   DCRRA++LD  SVKAH+ +G   ++ + Y
Sbjct: 51  RAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESY 110

Query: 130 PEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKR---SWELQT-LKEA 189
            E I +L++A  L +   Q+    ++I   L  AK + W     +R     EL + L   
Sbjct: 111 DEAIANLQRAYSLAK--EQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRL 170

Query: 190 CEAALEQKYFLDQSEPEGFVDQA---------ESAHREQLNSLRSVFENYAVADAPSEVP 249
             A  E++    Q   EG  D +         E+ H + +  +  +F          ++P
Sbjct: 171 IAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIP 230

Query: 250 DHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKE 308
           D+LC KI+ +++R+P ITPSG+TY+R  I +H ++VG+FDP+TR  L + QL+PNLA+KE
Sbjct: 231 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKE 290

[Close]

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot
Match: Q5ZHY5 (E3 ubiquitin-protein ligase CHIP OS=Gallus gallus OX=9031 GN=STUB1 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-38
Identity = 88/252 (34.92%), Postives = 141/252 (55.95%), Query Frame = 0


Query: 70  KAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDY 129
           +AI   P V VY TNRALC+ K     K   DC+RA++LD  SVKAH+ +G   ++ ++Y
Sbjct: 61  RAINRNPLVAVYYTNRALCYLKMQQHDKALADCKRALELDGQSVKAHFFLGQCQMEMENY 120

Query: 130 PEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTL------- 189
            E I +L++A +L +   Q+    ++I   L  AK + W     KR  +   L       
Sbjct: 121 DEAIANLQRAYNLAK--EQRLNFGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRL 180

Query: 190 ------KEACEA-ALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEV 249
                 +E  E    +Q+  +D+S     +   E+ H + L  +  +F          ++
Sbjct: 181 IMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDI 240

Query: 250 PDHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIK 308
           PD+LC KI+ +++R+P ITPSG+TY+R  I +H ++VG+FDP+TR  L + QL+PNLA+K
Sbjct: 241 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMK 300

[Close]

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot
Match: Q9WUD1 (E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-38
Identity = 90/251 (35.86%), Postives = 140/251 (55.78%), Query Frame = 0


Query: 70  KAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDY 129
           +AIT  P V VY TNRALC+ K    ++   DCRRA++LD  SVKAH+ +G   ++ + Y
Sbjct: 52  RAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESY 111

Query: 130 PEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKR---SWELQT-LKEA 189
            E I +L++A  L +   Q+    ++I   L  AK + W     +R     EL + L   
Sbjct: 112 DEAIANLQRAYSLAK--EQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL 171

Query: 190 CEAALEQKYFLDQSEPEGFVDQA---------ESAHREQLNSLRSVFENYAVADAPSEVP 249
             A  E++    Q   EG  D           E+ H + +  +  +F          ++P
Sbjct: 172 IAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIP 231

Query: 250 DHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKE 308
           D+LC KI+ +++R+P ITPSG+TY+R  I +H ++VG+FDP+TR  L + QL+PNLA+KE
Sbjct: 232 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKE 291

[Close]

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot
Match: Q9D0I6 (WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdsub1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 31/88 (35.23%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 219 LRSVFENYAVADA-PSEVPDHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDP 278
           LRS+ E  A  D+  S +PD   C IT ++++DPVI   G +YER  +     K     P
Sbjct: 385 LRSIEELRAKMDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSP 444

Query: 279 ITRELLDESQLVPNLAIKEAVQAFLDKH 306
           +T   L    L PN  +K A+  +L+ H
Sbjct: 445 MTNLALPSLVLTPNRTLKMAINRWLETH 472

[Close]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL
Match: A0A6J1HID6 (E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111463871 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155
Identity = 281/312 (90.06%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRII 60
           MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTE                     
Sbjct: 1   MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTE--------------------- 60

Query: 61  WDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG 120
                     AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG
Sbjct: 61  ----------AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG 120

Query: 121 LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ 180
           LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ
Sbjct: 121 LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ 180

Query: 181 TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC 240
           TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC
Sbjct: 181 TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC 240

Query: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA 300
           CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA
Sbjct: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA 281

Query: 301 FLDKHGWAYNTN 313
           FLDKHGWAYNTN
Sbjct: 301 FLDKHGWAYNTN 281

[Close]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL
Match: A0A6J1HQG3 (E3 ubiquitin-protein ligase CHIP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466868 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.0e-155
Identity = 280/312 (89.74%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRII 60
           MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTE                     
Sbjct: 1   MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTE--------------------- 60

Query: 61  WDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG 120
                     AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG
Sbjct: 61  ----------AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG 120

Query: 121 LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ 180
           LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ
Sbjct: 121 LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ 180

Query: 181 TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC 240
           TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC
Sbjct: 181 TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC 240

Query: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA 300
           CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA
Sbjct: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA 281

Query: 301 FLDKHGWAYNTN 313
           FLDKHGWAYN+N
Sbjct: 301 FLDKHGWAYNSN 281

[Close]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL
Match: A0A6J1DYV8 (E3 ubiquitin-protein ligase CHIP OS=Momordica charantia OX=3673 GN=LOC111025874 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.9e-138
Identity = 250/312 (80.13%), Postives = 266/312 (85.26%), Query Frame = 0


Query: 1   MGPGVFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRII 60
           MGPGV LSGAA+QAE+LRKDGNHYFQKGR+GAAIEAYTE                     
Sbjct: 1   MGPGVALSGAAKQAELLRKDGNHYFQKGRLGAAIEAYTE--------------------- 60

Query: 61  WDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVG 120
                     AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD NSVKAHYM+G
Sbjct: 61  ----------AITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDTNSVKAHYMLG 120

Query: 121 LALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQ 180
           L+LIQN++YP GIKHLEKALDLGRGAN KSY+VEEIWQELA AKYREWEQA TKRSWELQ
Sbjct: 121 LSLIQNEEYPAGIKHLEKALDLGRGANPKSYIVEEIWQELAKAKYREWEQAFTKRSWELQ 180

Query: 181 TLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLC 240
           TLKEACE ALEQKYFLD SE EGF+D+A+ AHR+QL ++RSVFE  A ADAPSEVPD+LC
Sbjct: 181 TLKEACEVALEQKYFLDHSELEGFIDEADIAHRKQLKAVRSVFEKVADADAPSEVPDYLC 240

Query: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQA 300
           CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELL ESQLVPNLAIKEAVQA
Sbjct: 241 CKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLSESQLVPNLAIKEAVQA 281

Query: 301 FLDKHGWAYNTN 313
           FLDKHGWAYNT+
Sbjct: 301 FLDKHGWAYNTD 281

[Close]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL
Match: A0A6J1K6X7 (E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita maxima OX=3661 GN=LOC111491225 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.3e-138
Identity = 254/313 (81.15%), Postives = 266/313 (84.98%), Query Frame = 0


Query: 1   MGPG-VFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRI 60
           MGPG V LSGAA+QAE+LRKDGNHYFQKGRIGAAIEAYTE                    
Sbjct: 1   MGPGFVALSGAAKQAELLRKDGNHYFQKGRIGAAIEAYTE-------------------- 60

Query: 61  IWDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMV 120
                      AITLCPNV VYLTNRALCHRKRNDWKKVEEDCRRAIQ+D+NSVK HYM+
Sbjct: 61  -----------AITLCPNVAVYLTNRALCHRKRNDWKKVEEDCRRAIQIDSNSVKGHYML 120

Query: 121 GLALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWEL 180
           GLALIQN  YPEGIKHLEKALDLGRGAN KSYMVEEIWQELA AKYREWE+ASTKRSWEL
Sbjct: 121 GLALIQNNVYPEGIKHLEKALDLGRGANPKSYMVEEIWQELAKAKYREWEKASTKRSWEL 180

Query: 181 QTLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHL 240
           QTLKEACEAALEQKYFLD SE EGFVD+AE AHR+QL SLRSVFE    ADAPSEVPD+L
Sbjct: 181 QTLKEACEAALEQKYFLDHSELEGFVDEAEIAHRKQLKSLRSVFEKVGEADAPSEVPDYL 240

Query: 241 CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQ 300
           CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDP+TRELLDESQLVPNLAIKEAV+
Sbjct: 241 CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPLTRELLDESQLVPNLAIKEAVE 282

Query: 301 AFLDKHGWAYNTN 313
           AFLDKHGWAYNT+
Sbjct: 301 AFLDKHGWAYNTD 282

[Close]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL
Match: A0A6J1EYU4 (E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111437457 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.3e-138
Identity = 254/313 (81.15%), Postives = 266/313 (84.98%), Query Frame = 0


Query: 1   MGPG-VFLSGAARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRI 60
           MGPG V LSGAA+QAE+LRKDGNHYFQKGRIGAAIEAYTE                    
Sbjct: 1   MGPGFVALSGAAKQAELLRKDGNHYFQKGRIGAAIEAYTE-------------------- 60

Query: 61  IWDILVVFDLKAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMV 120
                      AITLCPNV VYLTNRALCHRKRNDWKKVEEDCRRAIQ+D+NSVK HYM+
Sbjct: 61  -----------AITLCPNVAVYLTNRALCHRKRNDWKKVEEDCRRAIQIDSNSVKGHYML 120

Query: 121 GLALIQNKDYPEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWEL 180
           GLALIQN  YPEGIKHLEKALDLGRGAN KSYMVEEIWQELA AKYREWE+ASTKRSWEL
Sbjct: 121 GLALIQNNVYPEGIKHLEKALDLGRGANPKSYMVEEIWQELAKAKYREWEKASTKRSWEL 180

Query: 181 QTLKEACEAALEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHL 240
           QTLKEACEAALEQKYFLD SE EGFVD+AE AHR+QL SLRSVFE    ADAPSEVPD+L
Sbjct: 181 QTLKEACEAALEQKYFLDHSELEGFVDEAEIAHRKQLKSLRSVFEKVGEADAPSEVPDYL 240

Query: 241 CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQ 300
           CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDP+TRELLDESQLVPNLAIKEAV+
Sbjct: 241 CCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPLTRELLDESQLVPNLAIKEAVE 282

Query: 301 AFLDKHGWAYNTN 313
           AFLDKHGWAYNT+
Sbjct: 301 AFLDKHGWAYNTD 282

[Close]

BLAST of CmoCh19G001930 vs. TAIR 10
Match: AT3G07370.1 (carboxyl terminus of HSC70-interacting protein )

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-95
Identity = 175/300 (58.33%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 10  AARQAEILRKDGNHYFQKGRIGAAIEAYTEVSSCLSNCSFWSLFGYQNRIIWDILVVFDL 69
           A+  AE L++DGN+ F+K R GAAI+AYTE                              
Sbjct: 6   ASAMAERLKEDGNNCFKKERFGAAIDAYTE------------------------------ 65

Query: 70  KAITLCPNVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHYMVGLALIQNKDY 129
            AI L PNVP Y TNRALCH KR DW KVEEDCR+AIQL +NSVKAHYM+GLAL+Q K++
Sbjct: 66  -AIALSPNVPAYWTNRALCHMKRKDWTKVEEDCRKAIQLVHNSVKAHYMLGLALLQKKEF 125

Query: 130 PEGIKHLEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTLKEACEAA 189
             G+K L++ALDLGR +N   YMVEEIW+EL+ AKY EWE  S  RSWEL +LKE CEAA
Sbjct: 126 TNGVKELQRALDLGRCSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAA 185

Query: 190 LEQKYFLDQSEPEGFVDQAESAHREQLNSLRSVFENYAVADAPSEVPDHLCCKITLDILR 249
           L Q+  LD S  E   D+A +AH E+L +L  VF+  A  D P+EVPD+LCC ITL+I R
Sbjct: 186 LNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFR 245

Query: 250 DPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQAFLDKHGWAY 309
           DPVI+PSGVTYERA IL+H +KVG FDPITRE +D + LVPNLAIKEAV A+L+KH WAY
Sbjct: 246 DPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEKHVWAY 274

[Close]

BLAST of CmoCh19G001930 vs. TAIR 10
Match: AT3G52450.1 (plant U-box 22 )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 230 DAPSEVPDHLCCKITLDILRDPVITPSGVTYERAVILDH-FRKVGNFDPITRELLDESQL 289
           D   E+P    C I+LDI++DPVI  +G+TY+R  I    F    N  P+T++++ E+ L
Sbjct: 2   DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61

Query: 290 VPNLAIKEAVQAF 302
            PN  ++  +Q++
Sbjct: 62  TPNHTLRRLIQSW 74

[Close]

BLAST of CmoCh19G001930 vs. TAIR 10
Match: AT3G61390.2 (RING/U-box superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-08
Identity = 47/179 (26.26%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 137 EKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTLKEACEAALEQKYFL 196
           E+A      A +K+   E ++ E    + +E E+A  KR+ EL+ ++   E  + + Y +
Sbjct: 243 EEAEKTAVDALKKAKQWENVYFEELKQR-KETEKALRKRNDELEKMRSESETQITESYTV 302

Query: 197 DQ--SEPEGFVDQAESAHREQLNSLRSVF-----------ENYAVADAPSEVPDHLCCKI 256
            +   E      +     RE+   L+              E  A      E P +  C I
Sbjct: 303 IRKLQEKNNLSMETFRGIREEQEELKIKLREVSKLKGKREEEEASTSNHREPPQYFICPI 362

Query: 257 TLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQAFL 303
           T DI+ DP +   G TYE   I   F +     P+  + L  + LVPNLA++ A+Q +L
Sbjct: 363 THDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALRSAIQEWL 420

[Close]

BLAST of CmoCh19G001930 vs. TAIR 10
Match: AT4G36550.1 (ARM repeat superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-08
Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 0


Query: 155 EIWQELANAKYREWEQASTKRSWELQTLKEACEAALEQKYFLDQSEPEGFVDQAES---- 214
           E  +E A    RE  Q ST  S     +K+   AAL+    L  S PE  V +  S    
Sbjct: 128 EFSEEEAGKAIRELMQKSTSSSASPDEIKDFHYAALK----LQLSTPEAIVTERRSLKII 187

Query: 215 ---------AHREQLNSLRSVFENYAVADAPSE----VPDHLCCKITLDILRDPVITPSG 274
                     H + ++   S+  N A A+A  E    +P+   C ++  ++ DPVI  SG
Sbjct: 188 CEDHKQNSFTHHQSIDD--SLHANAAEAEASEEHNGTLPEKFKCTLSRTVMYDPVIISSG 247

Query: 275 VTYERAVILDHFRKVGNFDPITRELLDESQLVPNLAIKEAVQAFLDKHG 307
            T+ER  I   F +  +  PI++  LD+  L PN+ +K  +  +  K+G
Sbjct: 248 NTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCAKNG 290

[Close]

BLAST of CmoCh19G001930 vs. TAIR 10
Match: AT2G45920.1 (U-box domain-containing protein )

HSP 1 Score: 55.5 bits (132), Expect = 9.2e-08
Identity = 48/189 (25.40%), Postives = 82/189 (43.39%), Query Frame = 0


Query: 131 EGIKH----LEKALDLGRGANQKSYMVEEIWQELANAKYREWEQASTKRSWELQTLKEAC 190
           E  KH     EK   + RG   +S  +EE+ Q       +E E    K   +L+ ++   
Sbjct: 210 EAFKHQEVVKEKNEAIKRGKEWESAYLEELKQR------KETEMELKKVREKLEKMRYIS 269

Query: 191 EAALEQKYFLDQSEPEGF-----VDQAESAHREQLNSLRSVF--------ENYAVADAPS 250
           E  + + Y L Q   + +     V +     R+ L   R +         +  + +D   
Sbjct: 270 ENRITESYMLVQKLQDKYNLATKVLRKAKEERDLLIKGRDIAIIEVEELRKEVSRSDEHR 329

Query: 251 EVPDHLCCKITLDILRDPVITPSGVTYERAVILDHFRKVGNFDPITRELLDESQLVPNLA 303
           E P +  C I+L++++DP +   G TYE   I    +      P+T   L  ++LVPNLA
Sbjct: 330 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLA 389

The following BLAST results are available for this feature:

BLAST of CmoCh19G001930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRS9	3.7e-94	58.33	E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana OX=3702 GN=CHIP PE=1 SV...	[more]
Q9UNE7	3.7e-38	35.86	E3 ubiquitin-protein ligase CHIP OS=Homo sapiens OX=9606 GN=STUB1 PE=1 SV=2	[more]
Q5ZHY5	6.3e-38	34.92	E3 ubiquitin-protein ligase CHIP OS=Gallus gallus OX=9031 GN=STUB1 PE=2 SV=1	[more]
Q9WUD1	6.3e-38	35.86	E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1	[more]
Q9D0I6	1.5e-07	35.23	WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN...	[more]

BLAST of CmoCh19G001930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HID6	1.0e-155	90.06	E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1HQG3	3.0e-155	89.74	E3 ubiquitin-protein ligase CHIP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1DYV8	1.9e-138	80.13	E3 ubiquitin-protein ligase CHIP OS=Momordica charantia OX=3673 GN=LOC111025874 ...	[more]
A0A6J1K6X7	3.3e-138	81.15	E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita maxima OX=3661 GN=LOC11149122...	[more]
A0A6J1EYU4	3.3e-138	81.15	E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111437...	[more]

BLAST of CmoCh19G001930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07370.1	2.6e-95	58.33	carboxyl terminus of HSC70-interacting protein	[more]
AT3G52450.1	1.8e-08	35.62	plant U-box 22	[more]
AT3G61390.2	3.1e-08	26.26	RING/U-box superfamily protein	[more]
AT4G36550.1	4.1e-08	28.99	ARM repeat superfamily protein	[more]
AT2G45920.1	9.2e-08	25.40	U-box domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 238..301 e-value: 2.5E-24 score: 96.8
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 235..307 e-value: 1.9E-25 score: 88.8
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 234..308 score: 32.191269
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 113..146 e-value: 0.26 score: 20.4 coord: 14..47 e-value: 10.0 score: 14.9 coord: 79..112 e-value: 2.9E-4 score: 30.2
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 113..146 score: 8.0834
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 233..311 e-value: 3.9E-25 score: 89.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 10..175 e-value: 5.3E-29 score: 102.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 13..165
None	No IPR available	PFAM	PF12895	ANAPC3	coord: 81..139 e-value: 4.4E-8 score: 33.2
None	No IPR available	PANTHER	PTHR46803:SF3	OS08G0113300 PROTEIN	coord: 70..311 coord: 9..50
None	No IPR available	PANTHER	PTHR46803	E3 UBIQUITIN-PROTEIN LIGASE CHIP	coord: 70..311 coord: 9..50
None	No IPR available	CDD	cd16654	RING-Ubox_CHIP	coord: 235..301 e-value: 6.49646E-41 score: 135.065
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 226..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G001930.1	CmoCh19G001930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071218	cellular response to misfolded protein
biological_process	GO:0045862	positive regulation of proteolysis
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity