Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGCACCTTCGTGTTTGATGCCTTCTTCTCACCTTAATTCCATTAAATTCAATTTTGTTTGGAAATCCATTCCCCCACTTCCATTTCTTTGAATCCTCAAGCTTTCTGTGAATCAATCGCCATGTCGTTTGAGGAGGACGAAGAGACCTTCGAGCACACTCTCCTTGTTGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCCGGCGGCTGCAAATGCGGCGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGTGTTGTGTCGTGTAAGGACCGATGTGAGATCCGGTTGGAAGATCCGAACTCCGGTGAGCTTTTTGCTGCTTGTTTTGTTAATCCGGGTCAGAGGGAGAACTCCGTTGAGGCCGTTCTTGACTCCTCGCGATACTTCGTTTTGAAGATCGAGGATGGCCAGGGTAAGCACGCTTTTGTAGGTTTAGGTTTCGCTGAACGAAATGAAGCTTTTGATTTTAATGTGGCACTGTCCGATCATGAGAAGTATGTCAGGAGGGATCATGAGAAGGACCCGACTGGTGGCGGCGATGTCAATGAAGAGAGCCACATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGTATTCATTCCTCTGGTTTTATTTTCACCAAGCAATGAAGATGATTGTCTGCTGGGTTCTTGATTATGAACTGATCTTATTAATGAAATCTTCTGATCCAACCATTTGGAAAACAAATCATTCACATGGAAGGTTAGGAATCACGAACCTCCACAATGGTATGATATTGTCTACTTTGAGCATGGAAAGCCTATATGAATTCCTTAGTTATAACATCAACCCCTTAATTAGTCTAATTAGTCGACGTGGGAATCCTCTCCCAACAATTCTCCCCTCGAACAAAGTACACTATGGAGCCTCCCCTGAGGCCTATGGAGCCCTTGAACAACCTCCCCTTAATCGAAGCTCGACTCCCAACAATTCCCCCTCGAACAAAGTACGCTATACAGCCTCCCCTGAGGCCTATGAAGCCCTCGAACAGCCTCCTTAATCGAGGCTGACTTCTTCTCAAGAACCCTCAAACAAAGTACACCCTTTGTTCCACACTCGAGTTGCTTTTGACTACACCTTTAAGGCCACAACTTCTTTGTTCGACATCTGAGGATTCTATTGACATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGGAATCACGAACCTCCACAATTGTATGATATTGTCCACCTTGAGCATTAGCTTTCATGACTTTGCTTTTGTTTTCCTGGGCCTTATACCAATGGAGATGTATTCCTTGTTTATAAACTCATAACATTTTATAGCTTGTAGCTTGCAAGTAATTACTATGAGTAGCTGTGAAATCATAACGTTTTATATTGACATTGTGATTGTGCTTCTTTACAATGGGCTGGATGATAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAACCATCTAGTGGAACTGGTATGCTATCAGCTGCTGGCTTGTCAGGGTCTGGTACTGGAAAGCCAAAAACTCTGAGCCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCAGCTGCGCGGAAATTATCTGCCAGCACGTGTCGGGATGTCGGTCGTGAAGGAAAAAGAGACAATGTAAGCACTGCGAGCAATCCTTTATCAGATCTTTCCCAACTTGAGGTATAGTGTCTACTGCTAGTTGCTCATTTCCTGACAGAGAAACATGTTTGATGAGGATAATGTCGTTCTTAAGTAATATGAATTGACTCTTTAACTTACATATTATGGTTCCTCTGTCCTTTATGCACAACCCATTTAAATCTAGATTAGTTTTATGAAACACGTTACTAAGTTTGATTCGACTCGAGTATTGGTTTCTCTCCTTTGTGATTGGAATTGACTGCTATCTTAGATTCTTATTGTGATATCTCACATTGGTTGGAGAGGGGAACGAAGCATTTACTATAAAGGTGTGGAAATCTCTCCTTTGTGATTGGAATTGACTGCTATCTTAGATTCTTATTGTGATATCTCACATTGGTTGGAGAGGGGAACGAAGCATTTACTATAAAGGTGTGGAAATCTCTAACTAGTAGGCGCATTTTAAAAACCTTGAGGGAAAACCCAAAAAGGACAATATTTGCTAGTGATGGGCTTGGACTGTTGCTAGTGATGGGCTTGGACTGTTGCTAGTGATGGGCAGTGTGCCAGCGAGGACGTTGGGTCCCCAAGGGGGTGAATTGTGCAATCTCACATCAGTTGGAGAGGGAACAAAGCATTCCTTATAAGGGTGCGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACCTTGAGGGAAAGTCCAAAGAAGACAATATCTTCTAGTGGTGGGCTTGAGCTGTCACAAAATGTGGTAATAGAGCCAAGCACCGAGCGGTGTGCCAGCGACGATGCTAGGCCCCCAAGGGAGGTGGATTGTGAGATCCCACGTTGGTTGGGGAGGAGAACAAAGCATTTCTTACAAGAGTATGGAAACTTCTCCCAAAAAAACGTGTTTTAAAACCTTGAGGGGGAAGTTCGAAAGGAAAAGCTCAAAGAGGAAGTGTCTAGTGCGACGGAGTTTATTGAGTTTTTCAAATGCTTGAGCTATAGCCTTACGATTTCTTATTTCTTGAAGATAATCTGATATCGATCCACATTCTTTAGGTTCACTTAGAACATACATGAGTGCATGTATCCTTAGGAACTCATGTCAATGAACAAATCTAGAACAATTTTAACTCGTGATTCGTCGCATTTGCAGAGAAATCTTCCTTCGGCGCCGAGTTCGACAACAGCAGCAGCATCAGGATGGGCGGCATTCTGATCAAAGTAAGCTGGTGTTTGTTATTTAAAACAAAAAGTCTTAGTTTTATGTAATCTTCATTTTTTGTTCCTCTTGAGGGTGAAATGAGAGGGGAGGAGGAATGAGATGGAAGGGAAGCTATAAGTGATAATACCATATTGGAAAATAATCTTGGAATACTTATGTATACTTCTCCACTTATTTTCCCTATCTATCTTGAGTTGTCTCTTTAGCCCTTTTGCTTCTGTTCTTCATTGC
mRNA sequence
GTGTGCACCTTCGTGTTTGATGCCTTCTTCTCACCTTAATTCCATTAAATTCAATTTTGTTTGGAAATCCATTCCCCCACTTCCATTTCTTTGAATCCTCAAGCTTTCTGTGAATCAATCGCCATGTCGTTTGAGGAGGACGAAGAGACCTTCGAGCACACTCTCCTTGTTGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCCGGCGGCTGCAAATGCGGCGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGTGTTGTGTCGTGTAAGGACCGATGTGAGATCCGGTTGGAAGATCCGAACTCCGGTGAGCTTTTTGCTGCTTGTTTTGTTAATCCGGGTCAGAGGGAGAACTCCGTTGAGGCCGTTCTTGACTCCTCGCGATACTTCGTTTTGAAGATCGAGGATGGCCAGGGTAAGCACGCTTTTGTAGGTTTAGGTTTCGCTGAACGAAATGAAGCTTTTGATTTTAATGTGGCACTGTCCGATCATGAGAAGTATGTCAGGAGGGATCATGAGAAGGACCCGACTGGTGGCGGCGATGTCAATGAAGAGAGCCACATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAACCATCTAGTGGAACTGGTATGCTATCAGCTGCTGGCTTGTCAGGGTCTGGTACTGGAAAGCCAAAAACTCTGAGCCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCAGCTGCGCGGAAATTATCTGCCAGCACGTGTCGGGATGTCGGTCGTGAAGGAAAAAGAGACAATGTAAGCACTGCGAGCAATCCTTTATCAGATCTTTCCCAACTTGAGAGAAATCTTCCTTCGGCGCCGAGTTCGACAACAGCAGCAGCATCAGGATGGGCGGCATTCTGATCAAAGTAAGCTGGTGTTTGTTATTTAAAACAAAAAGTCTTAGTTTTATGTAATCTTCATTTTTTGTTCCTCTTGAGGGTGAAATGAGAGGGGAGGAGGAATGAGATGGAAGGGAAGCTATAAGTGATAATACCATATTGGAAAATAATCTTGGAATACTTATGTATACTTCTCCACTTATTTTCCCTATCTATCTTGAGTTGTCTCTTTAGCCCTTTTGCTTCTGTTCTTCATTGC
Coding sequence (CDS)
ATGTCGTTTGAGGAGGACGAAGAGACCTTCGAGCACACTCTCCTTGTTGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCCGGCGGCTGCAAATGCGGCGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGTGTTGTGTCGTGTAAGGACCGATGTGAGATCCGGTTGGAAGATCCGAACTCCGGTGAGCTTTTTGCTGCTTGTTTTGTTAATCCGGGTCAGAGGGAGAACTCCGTTGAGGCCGTTCTTGACTCCTCGCGATACTTCGTTTTGAAGATCGAGGATGGCCAGGGTAAGCACGCTTTTGTAGGTTTAGGTTTCGCTGAACGAAATGAAGCTTTTGATTTTAATGTGGCACTGTCCGATCATGAGAAGTATGTCAGGAGGGATCATGAGAAGGACCCGACTGGTGGCGGCGATGTCAATGAAGAGAGCCACATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAACCATCTAGTGGAACTGGTATGCTATCAGCTGCTGGCTTGTCAGGGTCTGGTACTGGAAAGCCAAAAACTCTGAGCCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCAGCTGCGCGGAAATTATCTGCCAGCACGTGTCGGGATGTCGGTCGTGAAGGAAAAAGAGACAATGTAAGCACTGCGAGCAATCCTTTATCAGATCTTTCCCAACTTGAGAGAAATCTTCCTTCGGCGCCGAGTTCGACAACAGCAGCAGCATCAGGATGGGCGGCATTCTGA
Protein sequence
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEAFDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGREGKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF
Homology
BLAST of CmoCh19G001110 vs. ExPASy Swiss-Prot
Match:
Q681Q7 (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 PE=1 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 1.3e-106
Identity = 208/287 (72.47%), Postives = 234/287 (81.53%), Query Frame = 0
Query: 1 MSF--EEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDR 60
MSF EE+EETFEHTLLVVREVSVYKIPPRTTSGG KCGEWLQSDKIWSGRLRVVSCKDR
Sbjct: 1 MSFEEEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDR 60
Query: 61 CEIRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERN 120
CEIRLED NSG+LFAACFV+PG+RENSVE LDSSRYFVL+I+DG+GK+AF+GLGFAERN
Sbjct: 61 CEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERN 120
Query: 121 EAFDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKP 180
EAFDFNVALSDHEKYVRR+ EK+ G ++HIDIHPAVNHRLKEGETIRINVK KP
Sbjct: 121 EAFDFNVALSDHEKYVRREKEKET--GETSESDNHIDIHPAVNHRLKEGETIRINVKPKP 180
Query: 181 -SSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDV 240
++GTGMLSAA SGTGKPK L+LAPPP A SPLPPPPNDP A ++++ C++
Sbjct: 181 TTNGTGMLSAA---LSGTGKPKPLALAPPPKAAGVTRSPLPPPPNDPVASRIASDGCKE- 240
Query: 241 GREGKRDNVSTASNPLSDLSQLERNLP----SAPSSTTAAASGWAAF 281
S + PLSDLSQL++NLP S S +T AASGWAAF
Sbjct: 241 ---------SRRNEPLSDLSQLKKNLPSTAGSGSSKSTGAASGWAAF 272
BLAST of CmoCh19G001110 vs. ExPASy Swiss-Prot
Match:
Q9NVZ3 (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens OX=9606 GN=NECAP2 PE=1 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35
Identity = 93/226 (41.15%), Postives = 130/226 (57.52%), Query Frame = 0
Query: 6 DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 65
+E +E L V +V VY+IPPR T+ G + EW WSGRLR+ + I+LED
Sbjct: 2 EESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLED 61
Query: 66 PNSGELFAACFVN--PGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEAFDF 125
SGELFA V+ PG +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62 RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121
Query: 126 NVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSSGTG 185
NVAL DH K+V++ E + + D P ++ KEG+TI++N+
Sbjct: 122 NVALQDHFKWVKQQCE-------FAKQAQNPDQGPKLDLGFKEGQTIKLNI-------AN 181
Query: 186 MLSAAGLSGSGTGKPKT---LSLAPPPTGARKISSPLPPPPNDPAA 227
M G +G+ +P + LSL PPP G + +S L PPP + A
Sbjct: 182 MKKKEGAAGNPRVRPASTGGLSLLPPPPGGK--TSTLIPPPGEQLA 208
BLAST of CmoCh19G001110 vs. ExPASy Swiss-Prot
Match:
Q5E9Q4 (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus OX=9913 GN=NECAP2 PE=2 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 2.6e-35
Identity = 88/211 (41.71%), Postives = 123/211 (58.29%), Query Frame = 0
Query: 6 DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 65
+E +E L V +V VY+IPPR T+ G + EW WSGRLR+ + I+LED
Sbjct: 2 EEAEYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQVAYIKLED 61
Query: 66 PNSGELFAACFVN--PGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEAFDF 125
SGELFA V+ PG +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62 RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121
Query: 126 NVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSSGTG 185
NVAL DH K+V++ E + + D P ++ KEG+TI++N+
Sbjct: 122 NVALQDHFKWVKQQCE-------FAKQAQNPDQGPKLDLSFKEGQTIKLNI-------AS 181
Query: 186 MLSAAGLSGSGTGKPKT---LSLAPPPTGAR 212
M G +G+ +P + LSL PPP GA+
Sbjct: 182 MKKKDGAAGTPRARPTSTGGLSLLPPPPGAK 195
BLAST of CmoCh19G001110 vs. ExPASy Swiss-Prot
Match:
Q6P756 (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Necap2 PE=1 SV=2)
HSP 1 Score: 149.1 bits (375), Expect = 7.7e-35
Identity = 103/280 (36.79%), Postives = 145/280 (51.79%), Query Frame = 0
Query: 6 DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 65
+E +E L V EV VY+IPPR T+ G + EW WSGRLR+ + I+LED
Sbjct: 2 EESEYESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLED 61
Query: 66 PNSGELFAACFVN--PGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEAFDF 125
SGELFA V+ PG +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62 RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121
Query: 126 NVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSSGTG 185
NVAL DH K+V++ E + + D P ++ KEG+TI+IN+
Sbjct: 122 NVALQDHFKWVKQQCE-------FAKQAQNPDEGPKLDLGFKEGQTIKINI-------AN 181
Query: 186 MLSAAGLSGSGTGKPKT---LSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 245
M G +G+ +P + LSL PPP G K+S+ +PP + L G
Sbjct: 182 MRKKEGAAGAPRTRPASAGGLSLLPPPPGG-KMSTLIPPSGEQFSGGSLVQPVSGSGGAT 241
Query: 246 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
A+ +D+ +PSS + +GW F
Sbjct: 242 ELWPQSKPAAAATADIWGDFTKSTGSPSSQSQPGTGWVQF 263
BLAST of CmoCh19G001110 vs. ExPASy Swiss-Prot
Match:
Q9D1J1 (Adaptin ear-binding coat-associated protein 2 OS=Mus musculus OX=10090 GN=Necap2 PE=1 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 2.2e-34
Identity = 105/284 (36.97%), Postives = 147/284 (51.76%), Query Frame = 0
Query: 6 DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 65
+E +E L V EV VY+IPPR T+ G + EW WSGRLR+ + I+LED
Sbjct: 2 EESEYESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLED 61
Query: 66 PNSGELFAACFVN--PGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEAFDF 125
SGELFA V+ PG +VE+V DSSRYFV++IEDG G+ AF+GLGF +R +AFDF
Sbjct: 62 RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGLGFGDRGDAFDF 121
Query: 126 NVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSSGTG 185
NVAL DH K+V++ E + + D P ++ K+G+TI+IN+
Sbjct: 122 NVALQDHFKWVKQQCE-------FAKQAQNPDEGPKLDLGFKDGQTIKINI-------AN 181
Query: 186 MLSAAGLSGSGTGKPKT---LSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 245
M G +G+ +P + LSL PPP G + SS + PP + + S V
Sbjct: 182 MRKKEGAAGTPRARPTSAGGLSLLPPPPGGK--SSTVIPPSGEQLSVGGSLVQPAVVSGS 241
Query: 246 GKRDNVSTASNP----LSDLSQLERNLPSAPSSTTAAASGWAAF 281
G + S P +D+ +PSS + +GW F
Sbjct: 242 GGATELWPQSKPAAAATADIWGDFTKSTGSPSSQSQPGTGWVQF 266
BLAST of CmoCh19G001110 vs. ExPASy TrEMBL
Match:
A0A6J1HLP0 (uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464096 PE=4 SV=1)
HSP 1 Score: 560.8 bits (1444), Expect = 3.1e-156
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
Query: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA
Sbjct: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
Query: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
Query: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE
Sbjct: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
Query: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF
Sbjct: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 280
BLAST of CmoCh19G001110 vs. ExPASy TrEMBL
Match:
A0A6J1HUU0 (uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467022 PE=4 SV=1)
HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153
Identity = 275/280 (98.21%), Postives = 277/280 (98.93%), Query Frame = 0
Query: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRV SCKDRCE
Sbjct: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVASCKDRCE 60
Query: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA
Sbjct: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
Query: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
FDFNVALSDHEKYVRRDHEKDPTGGG+VNEESHIDIHPAVNHRLKEGETIRINVKHKPSS
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDPTGGGNVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
Query: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAS CRDVGRE
Sbjct: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASACRDVGRE 240
Query: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
GKRDNVS AS+PLSDLSQLERNLPSAPSSTTAAASGWAAF
Sbjct: 241 GKRDNVSNASDPLSDLSQLERNLPSAPSSTTAAASGWAAF 280
BLAST of CmoCh19G001110 vs. ExPASy TrEMBL
Match:
A0A6J1HHH3 (uncharacterized protein At1g03900-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464096 PE=4 SV=1)
HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145
Identity = 265/280 (94.64%), Postives = 265/280 (94.64%), Query Frame = 0
Query: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
Query: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA
Sbjct: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
Query: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
Query: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE
Sbjct: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
Query: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
GKRDN RNLPSAPSSTTAAASGWAAF
Sbjct: 241 GKRDN---------------RNLPSAPSSTTAAASGWAAF 265
BLAST of CmoCh19G001110 vs. ExPASy TrEMBL
Match:
A0A6J1HSI6 (uncharacterized protein At1g03900-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467022 PE=4 SV=1)
HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143
Identity = 262/280 (93.57%), Postives = 263/280 (93.93%), Query Frame = 0
Query: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRV SCKDRCE
Sbjct: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVASCKDRCE 60
Query: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA
Sbjct: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
Query: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
FDFNVALSDHEKYVRRDHEKDPTGGG+VNEESHIDIHPAVNHRLKEGETIRINVKHKPSS
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDPTGGGNVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
Query: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAS CRDVGRE
Sbjct: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASACRDVGRE 240
Query: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
GKRDN RNLPSAPSSTTAAASGWAAF
Sbjct: 241 GKRDN---------------RNLPSAPSSTTAAASGWAAF 265
BLAST of CmoCh19G001110 vs. ExPASy TrEMBL
Match:
A0A6J1K5Y6 (uncharacterized protein At1g03900-like OS=Cucurbita maxima OX=3661 GN=LOC111491465 PE=4 SV=1)
HSP 1 Score: 512.7 bits (1319), Expect = 9.8e-142
Identity = 255/280 (91.07%), Postives = 263/280 (93.93%), Query Frame = 0
Query: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60
MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGG KCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1 MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDRCE 60
Query: 61 IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
IRLEDPNSGELFAACF+NPGQR+NSVE VLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA
Sbjct: 61 IRLEDPNSGELFAACFINPGQRDNSVETVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120
Query: 121 FDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKPSS 180
FDFNVALSDHEKYVRRDHEKDP+ G D NEES IDIHPAVNHRLKEGETIRINVKHKPS
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDPSTGSDANEESQIDIHPAVNHRLKEGETIRINVKHKPSG 180
Query: 181 GTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVGRE 240
GTGMLSAAG+SG GTGKPK LSLAPPPTGA KI SPLPPPPNDPAARKLSAS CRDVG E
Sbjct: 181 GTGMLSAAGMSGFGTGKPKALSLAPPPTGAVKIRSPLPPPPNDPAARKLSASACRDVGHE 240
Query: 241 GKRDNVSTASNPLSDLSQLERNLPSAPSSTTAAASGWAAF 281
GK+DNV A++PLSDLSQLE+NLPSAP ST AAASGWAAF
Sbjct: 241 GKKDNVRHAADPLSDLSQLEKNLPSAPGSTKAAASGWAAF 280
BLAST of CmoCh19G001110 vs. TAIR 10
Match:
AT1G03900.1 (non-intrinsic ABC protein 4 )
HSP 1 Score: 387.5 bits (994), Expect = 9.1e-108
Identity = 208/287 (72.47%), Postives = 234/287 (81.53%), Query Frame = 0
Query: 1 MSF--EEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDR 60
MSF EE+EETFEHTLLVVREVSVYKIPPRTTSGG KCGEWLQSDKIWSGRLRVVSCKDR
Sbjct: 1 MSFEEEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDR 60
Query: 61 CEIRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERN 120
CEIRLED NSG+LFAACFV+PG+RENSVE LDSSRYFVL+I+DG+GK+AF+GLGFAERN
Sbjct: 61 CEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERN 120
Query: 121 EAFDFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHKP 180
EAFDFNVALSDHEKYVRR+ EK+ G ++HIDIHPAVNHRLKEGETIRINVK KP
Sbjct: 121 EAFDFNVALSDHEKYVRREKEKET--GETSESDNHIDIHPAVNHRLKEGETIRINVKPKP 180
Query: 181 -SSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDV 240
++GTGMLSAA SGTGKPK L+LAPPP A SPLPPPPNDP A ++++ C++
Sbjct: 181 TTNGTGMLSAA---LSGTGKPKPLALAPPPKAAGVTRSPLPPPPNDPVASRIASDGCKE- 240
Query: 241 GREGKRDNVSTASNPLSDLSQLERNLP----SAPSSTTAAASGWAAF 281
S + PLSDLSQL++NLP S S +T AASGWAAF
Sbjct: 241 ---------SRRNEPLSDLSQLKKNLPSTAGSGSSKSTGAASGWAAF 272
BLAST of CmoCh19G001110 vs. TAIR 10
Match:
AT3G58600.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1 )
HSP 1 Score: 139.8 bits (351), Expect = 3.3e-33
Identity = 99/271 (36.53%), Postives = 141/271 (52.03%), Query Frame = 0
Query: 5 EDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLE 64
E+ E E L V E VY IPPR T+ + EW + W G L+VVS + C I+L
Sbjct: 27 EEREAIEIALFQVPECYVYLIPPRKTAASYRADEWDVNKWAWEGALKVVSKGEECIIKLV 86
Query: 65 DPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIE---DGQGKHAFVGLGFAERNEAF 124
D +GEL+A F+ G+ + VEAV+DSSRYFVL++E DG+ +HAF+GLGF ER EA+
Sbjct: 87 DKTTGELYAQAFLREGEL-HPVEAVIDSSRYFVLRVEEKIDGRVRHAFIGLGFRERTEAY 146
Query: 125 DFNVALSDHEKYVRRDHEKDPTGGGDVNEESHIDIHPAVNHRLKEGETIRINVKHK---- 184
DF AL DH KY+ + + E H +V++ LKEGETI + +K++
Sbjct: 147 DFQAALHDHMKYLNKKKTAE-------EMEQHYQNTSSVDYSLKEGETIVLQLKNRSDKD 206
Query: 185 PSSGTGMLSAAGLSGSGTGKP-----KTLSLAPPPTG-------ARKISSPLPPPPN-DP 244
S T S LS GK ++ L PPP G A+K S LPP +
Sbjct: 207 SKSKTVEKSLGNLSLEDKGKSIETTIPSIILPPPPPGPLSPVTTAQKSPSSLPPSLSLQR 266
Query: 245 AARKLSASTCRDVGREGKRDNVSTASNPLSD 256
++ + T R+ E K++++ + D
Sbjct: 267 SSEQQDLDTKREEEEEEKKEDLKAKDGGVED 289
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q681Q7 | 1.3e-106 | 72.47 | Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 P... | [more] |
Q9NVZ3 | 1.5e-35 | 41.15 | Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens OX=9606 GN=NECAP2 ... | [more] |
Q5E9Q4 | 2.6e-35 | 41.71 | Adaptin ear-binding coat-associated protein 2 OS=Bos taurus OX=9913 GN=NECAP2 PE... | [more] |
Q6P756 | 7.7e-35 | 36.79 | Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=N... | [more] |
Q9D1J1 | 2.2e-34 | 36.97 | Adaptin ear-binding coat-associated protein 2 OS=Mus musculus OX=10090 GN=Necap2... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HLP0 | 3.1e-156 | 100.00 | uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1HUU0 | 1.9e-153 | 98.21 | uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1HHH3 | 2.5e-145 | 94.64 | uncharacterized protein At1g03900-like isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1HSI6 | 1.0e-143 | 93.57 | uncharacterized protein At1g03900-like isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1K5Y6 | 9.8e-142 | 91.07 | uncharacterized protein At1g03900-like OS=Cucurbita maxima OX=3661 GN=LOC1114914... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03900.1 | 9.1e-108 | 72.47 | non-intrinsic ABC protein 4 | [more] |
AT3G58600.1 | 3.3e-33 | 36.53 | Adaptin ear-binding coat-associated protein 1 NECAP-1 | [more] |