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CmoCh19G001080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCAACTATATATATCAATACAACCAAATCTTCATTCCTTATTAGATACCCATTTCCTTCCCCAAATTGCTCTCTTCTTCTTCATTTCTCTTGAGTTTAATACCCATAATTTTGTTCTTAAGTTTTTAGTTGTTCATAGCAATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGGTAGGCTCTTTTTCTTATGAATCTCAGCTATTTTGGAGGTTTTTCTTGGATTCATAATGGGTTTTCTTCAATTCGTTCATATATTTCTTAATCAATTGGTTTGGTTGATGTTTTGTGTGTAAAAAGATGAACTTTTTTGCATGAACTTGTAAAGAACAAAGATTTTCCAATGTTTTTGTGTAGTACGATGTGGTTTTGTATGACAAAAAATCTGTGTTTTTGGTTCTTTGTTTACCTTTCGATGTCATACGAGGTGGTTTTAAGAGGCATTAATTTCATGACAATTGGCTAAATCCCAACCCTTTTACGAGGGTCGGATTTTATCTCGATCTCGACCTCGACCTCATTCACATTAAATATCCAAAGAATCTCTCTTTCTCTCATACCCCACGTACAAACACGTGCATTCGTGTAAAAATTTCGTCTTTCAGCATTTTGTTTCGAGAATATTCCATCAGATGCTTTGATCGTTGAGCTGTTTTTAGCGTTTTTTTTCAAGACCGAAGCTCTATTTCTCTCCCGAACTATTAGATAAGGTTTTGTTTAGGGAAGACACGTAGAAGAGAGGGAAAACAATGGATCAAAATTGAGAAACTTTTGGTCCCATAATTGGAGTAATATAATATAAGTTGATGAGTCATAATACCCATTTTCCCACAAGTGCTTGAGCTAGCTTCAACTTGTAGAACAAGCTTCATTAATTATTGATCCATTTCTTCTTTGTTCTTTGTTCTTCACAAAATTATATATCAAATCTTTCTTTCATGCAAACAAATCTTGTTTTGTTGTTTATGATCATCATTACATTGCTAATCATACCTTTATGATAGGACGATTATTGTAATTTAGCGTGAAAAAATACTTTTATTTATTAATTATTTAGTTGATTAATATCTTAATCATAGGCTTCATTAGCCTTAGGCCTTAGTTTCTATTTTATTCGATAAATTATTCATTACTTAAATAGAACAAGTTCAATCATATATAGTTAATGAAAGCGAAAGATTAATTTAACTAATTAATTCTTTTTTGTTTTTGGGGGAATTAAAAGAGGTGGCGAAGCTAAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCAACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGTTGGATTTTTCAATATTTGTTTTTTCTTTTTAGTCCTTCAATTTGGAAAGAATTATATTCATGTACCCTTAAAGGGTAACAACACAAAAGTTGGTGTCTTTTTCCACTTTGGTCATATTCAATTTAATGAATTTTTCTTGGTTTGCATTAACGAAGAATATTTATTTTTTAGTCCCTCCAAATTTCAAAATTAACAAAATGAGCCAATTTATGTGAGTGCAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACATTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCAAGCTCCATCTCCCCCCCCAAGTGATCCGAGCAAGACCGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATTAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAACTAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGATGGCGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGGTTTTCCTCTGAACGTGTGATGATATCTGCTACGCTGCGCTGTTGATATATAGCTTGTATATTAATGTATGGTGCATTTGGACATAGGAGAGTATTGGGGCATTGTTGCTTTGGACACACTTAGATTTCATTCTTTCTTTTAAATCTTTGGTCTTGTTGTAAAGAACATTAGTCAAAGCTGTAATGATATCAGTTAGGCGCATTAATGTGGATGTAATAAACTTGTGATTTTTGATACCACAATATAGAGTTCATGTGATGACGAAGCGGAACTACGACCCACAAAGCTCGAGGAGATGCATTTGAATCGTAAGAGTTCAAGGGGAAACGAAAGTCACTTAGCTTCTAGAGTTAGAGTGAAATATTCCTTAAATCCCCCGAACGTTACTTAGCTTGTGTAAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTTTTTATAAGGGTATGGAAATCTCTCCCTAGCAAACGCGTTTTTAAACTGTGAAACTGAGAGCAATACGTAACGGACCAAAACGGACAATATCTATTAGCGGTGGGATTGGGCTGTTACAGCTTGTGCATGAGTTGGAAATAACACGTGACATTCTCAGATGTTGTGGGGATGAGACGACGTGACATACTACGATTATATACACAAGATTTTCTCCATTAGAATTGAGAATGTAGATCCTAATATACCTTCCATTTGTTCATGAGGTCCTATCGAGACTGCAGGCCTATTCATGAGGTCCCATCGACAAGCCTATCAACAAGCCTAGAGATTTCGTTAAAGAGAGTACATGTCTAAATATCGTCTTACCCGAGTCGTGCATACTTCATTCGCACTTAGACACCTTGCCCCGAGCTCATTTTGCGAAAGCCATACATATTTTTTTTCTTAATTTTCATTTTTCTTGTTTTCTTTAAGTTTCACAAGGTTTGGTGATATGCACCTTGGTTGGGAGAGAGAACGAAGCATTTTTTATAAAGGTGTGGAAACTCCTCCTTAGTAGACGCATTTTAAAAACCTTGAGAGAAAGTCCGAAAGGGAAAGCCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCCATTACAAATGGTATCAGAGCCACTGAGCAATGTGCCAGTGAAAAGGCTAAGTACCGAAAGGGGGTGAACATGAGGCAGTGTGCCAGCAAGGATGCTGGAACCCGAAGGAGGGTGGATTGGGGGCTCCCACATCGATTGGAGAAGGAAACGAATGCGAGCAAGGACGCTGAGCCCCGAAGGAGGCAGATTGTGAGATCCCACATCGGTTGGGAAGGAGAATGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAAACATTAAGAGGAAGCCCAAAGAGGACAATATCTGCTAGAGGTGGGTTTGGGCCATTACAGGTCGTGTAGAATCTAACTTATTTTTCACTTGAGTATGTGTATATGGTGGAGAGATTTACGATCGAACATCTTCATTCTAAGCTCAACACTATCCGTATCAGAGATATTTAAACTTCTAGCATCTTTCTCAAGGTTGTATGCCTAAATCCGTTGACCTATGTTTTCGAGAGTTTTCGAGAGTAGTAATGGTTCTCGCATGCCCTATAAAGACAAATATATGAAAACGACATGATTCATCCTCTACGTATCGAGTTTTCTTACACTTATGTAATCACTACACTTAGATAGGGCTATCAATGATGAACAGTGTTGCACAAAAAAGACTGAACAATAATAGAAACCTCTAA CCCAACTATATATATCAATACAACCAAATCTTCATTCCTTATTAGATACCCATTTCCTTCCCCAAATTGCTCTCTTCTTCTTCATTTCTCTTGAGTTTAATACCCATAATTTTGTTCTTAAGTTTTTAGTTGTTCATAGCAATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGAGGTGGCGAAGCTAAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCAACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACATTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCAAGCTCCATCTCCCCCCCCAAGTGATCCGAGCAAGACCGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATTAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAACTAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGATGGCGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGATAGGGCTATCAATGATGAACAGTGTTGCACAAAAAAGACTGAACAATAATAGAAACCTCTAA ATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGAGGTGGCGAAGCTAAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCAACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACATTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCAAGCTCCATCTCCCCCCCCAAGTGATCCGAGCAAGACCGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATTAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAACTAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGATGGCGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGATAGGGCTATCAATGATGAACAGTGTTGCACAAAAAAGACTGAACAATAATAGAAACCTCTAA MGLKDIGASLPPGFRFYPSDEELVCHYLYKKIMNEQVLKGTLVEIDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGYRTNRATTCGYWKATGKDRTVVDSSTGEIVGMKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKLNQHFTFGNFEHVPSVLVQAPSPPPSDPSKTVMPSSYNVDIDIASLSSSIAPEQISHSHTGSCSFLHLLQQLPQEKQDNNPKTDQLFCPKTNESDYGVMWEMDLEEHTFRDGVVSNLDQMEFDVDSSQIGLSMMNSVAQKRLNNNRNL Homology
BLAST of CmoCh19G001080 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 7.7e-52 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.5e-50 Identity = 90/153 (58.82%), Postives = 110/153 (71.90%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy Swiss-Prot
Match: Q84TE6 (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 2.5e-50 Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.7e-49 Identity = 101/197 (51.27%), Postives = 131/197 (66.50%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47 Identity = 97/195 (49.74%), Postives = 129/195 (66.15%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy TrEMBL
Match: A0A6J1HFI6 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111463835 PE=4 SV=1) HSP 1 Score: 619.8 bits (1597), Expect = 6.3e-174 Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy TrEMBL
Match: A0A6J1HWP7 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466974 PE=4 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 1.9e-170 Identity = 288/296 (97.30%), Postives = 291/296 (98.31%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy TrEMBL
Match: A0A0A0LB56 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 7.3e-146 Identity = 257/303 (84.82%), Postives = 274/303 (90.43%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy TrEMBL
Match: A0A1S3BIA3 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 2.1e-145 Identity = 259/312 (83.01%), Postives = 275/312 (88.14%), Query Frame = 0
BLAST of CmoCh19G001080 vs. ExPASy TrEMBL
Match: A0A6J1EXP5 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111437436 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 3.3e-138 Identity = 248/298 (83.22%), Postives = 267/298 (89.60%), Query Frame = 0
BLAST of CmoCh19G001080 vs. TAIR 10
Match: AT4G28530.1 (NAC domain containing protein 74 ) HSP 1 Score: 269.6 bits (688), Expect = 3.1e-72 Identity = 130/189 (68.78%), Postives = 145/189 (76.72%), Query Frame = 0
BLAST of CmoCh19G001080 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 205.7 bits (522), Expect = 5.5e-53 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of CmoCh19G001080 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51 Identity = 90/153 (58.82%), Postives = 110/153 (71.90%), Query Frame = 0
BLAST of CmoCh19G001080 vs. TAIR 10
Match: AT1G56010.2 (NAC domain containing protein 1 ) HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51 Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CmoCh19G001080 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 ) HSP 1 Score: 198.7 bits (504), Expect = 6.7e-51 Identity = 103/222 (46.40%), Postives = 135/222 (60.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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