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CmoCh19G000170 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTCATCTAGAAATTTTCTCGTTCAAAGAGGAGAAAATGTTTCTGGGAAGATTATAATTTTCTTTGAGCGCGTTTGACTATTTCAATTTTTCCGTTGAACAATCAACATTATTGTTCTCTTTTTTTCAGCTCACCTACTGATTGCAACATGTATATAAGAATATAAACGTTTGAATCGCATTTCACCACAAACTCCTTCGTTTTCTTCTTTCTCGTGTTCATTCTGTCCATTGTTGATTACAGCGACCGAGCTTTTATGGCTGCTGAAGCTCTTACAGAAGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCTGATGGTGAGTTCATCTTTCTCTCCCTTTTCTTTTTGCCCACAACCTGTTTGATATTTTGCCTGAATGAAACATGAGCCTGAAATTTATAGTTTCTTCTTGTTCTTGTTCTTGTTCTTGTTTTCTAAATTAAATCAAGTGTTGATGGAAGAAGTACATGTTAATGATCATGGAGCTGCTCAATTTAGAAAAATTGATAGTTTGTTCATTAGATTCACTAACTTAACGAGCTCAATTGAATCTTAACAAGCTAAACAGAATCTGGGAATTCATAGATTCATATCAGATTACTTGAAAGAAAAAAAACTTGGTTCTATGCATGATCGGTTTTAATCATTCTTTCGTTAAGAATCACAACTCTCCACAATTGTATGAAATTATCTATTGAGTTTTCCTAAAAAGCCTCGTACCTATTGACATGGCTAAATTAAGGGATGTATTCCTTACTTATAAACTCATAATCATTCCTAAATTGGCTGCCAATGTGAGACTCACTCCCAACAATTCTCAATATCTTTCTCTTAGTTATGATAAATCTTAACTTCTTACCAGTCAAGATTAGTTTATTCTTTGTGAGAATTGTTTTCGTTTGAGTTGATAAAGGGTGAAGGTTTAAGGGTGATTGTTAAGTGAAAGTTGTGGGGATATTTGTAGGATTCATCACGGTGGAGGAGCTAGGGGCAGCAATTCAGACATTGGATGGACACCCCACCAAGAATGAAGTTAGAGATATGATAAGTGAAGTCGATGTCGACAGTAACGGGACGATAGACTTTGAGGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGTAAAGAAGCAAAACATCACTGCTATTTTACATGTGTACATGGTGGCTGAGAAGGGGTTGGTTGGGTTTTGCAGGACAATGTTAGTGAGGAGCTAAAAGAAGCCTTTAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGGTAAATTTTCAATCATTTTCTTCTACTTCTCCCTGAATTTGGTCTGATGATGTGCACCCAAAACACTTTTCACAACACAGATTTTCATTTTGCCAAAGGGTCCCTTAGAGATCTCTCTCTGCTGTTGTTATGACTGTTGTTACTTTGCCTGCCCCTTTGAACCGATTTGAAGCCATTGCTGTGAGGTCCCACGTCGGTTGGAGAGGGGAAGGAAACCTTCTTTATAGGGTGTAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGAAAAATTCGAAAGGAAAATCCCAAAGAGGACAATATCTATTAGCGGTATGCTTGGGCTATTACAAATAGTATTAGAGTCAGACACCGAGCAGTGTGCCAGCGAGGACGTTGGGCCCCAAGGAAGTAGATTATAAGGTCTCACATCGGTTAGAGGGAGGAACAAAGCATTCTTTATAAGGGTGTGGAAATCTCTCTCTAGTAGACGCGTTTTAAAATTTTTTAGGGAAAGTCTGAAAAGAAAAGCTTAAAGAGGAGAATATCTGCTAGCGGTGGGCTTGGACGATTACAATTGTCGTGGTCAAAGAAAACCAAAAGGCAGGCTACTTTTAAAATCTAAAAGTCAAAAGACAATTCACAAAACCTCTATATTATTATATTGTCTAAAAGCTAAAACCTAAGTTGAGATCCACGTCGGTTGGAGAAGAGAATGAAACATTCTTTATAAGGGTGTATAAGGGTGTAGAAACCTCTCCCTAGCATGCGTTTTAAAAACCTTTGGGGAAAGCCTGAAAGGAAAAGCTCAAAGAAAATAGTTGTTACCCTGGTGAAGTCCATTTAACTGAAATGGTAAGCCAAATGCTGACCAACAAAGTGATTTCCATGATTTGAATGTGCAGTTGAGAAATGTGATGATAAACTTGGGAGAGAGATTGACAGATGATGAGGCTGAACAGATGATTCGAGAGGCCGATTTGGATGGCGATGGCCGAGTGAGTTACGAAGAGTTTGCGAGGATAATGACAATCAGTTGATGTCCTTCCAACATGTTATGTCGATTAGGGTGAAAACTTCATAATCCTAAGAACAATCTTTCATTTATGTTTATTGGTTCCATTTGCCCTCACACTGTAAATTAGAACACTTCAAACTGCAAAGAAATGTGATTTCATCTCATGTTTGTTTGTTTTATGCTAATAATCCTAGCTGCCCATTGTGTGATTGCCAAAATCCTTCATTCAAAGCTCTTCCCAATCCGTCTCATTGATTCTCGGTCTAGATAGATTTACAAGAGCTACAAAAGTGATGATGATTGACGGGTTGAACTATCTTACGGTCTCGATCTTTTCTTCTCTTTCATTCAATTACTTGAAGAACAGTAGACTCGGTGAAGAGATAACAAGTGTTAAATATATAAATAAACTTAACTCAATTAC TTTTTTTTTTTTCATCTAGAAATTTTCTCGTTCAAAGAGGAGAAAATGTTTCTGGGAAGATTATAATTTTCTTTGAGCGCGTTTGACTATTTCAATTTTTCCGTTGAACAATCAACATTATTGTTCTCTTTTTTTCAGCTCACCTACTGATTGCAACATCGACCGAGCTTTTATGGCTGCTGAAGCTCTTACAGAAGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCTGATGGATTCATCACGGTGGAGGAGCTAGGGGCAGCAATTCAGACATTGGATGGACACCCCACCAAGAATGAAGTTAGAGATATGATAAGTGAAGTCGATGTCGACAGTAACGGGACGATAGACTTTGAGGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGACAATGTTAGTGAGGAGCTAAAAGAAGCCTTTAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGTTGAGAAATGTGATGATAAACTTGGGAGAGAGATTGACAGATGATGAGGCTGAACAGATGATTCGAGAGGCCGATTTGGATGGCGATGGCCGAGTGAGTTACGAAGAGTTTGCGAGGATAATGACAATCAGTTGATGTCCTTCCAACATGTTATGTCGATTAGGGTGAAAACTTCATAATCCTAAGAACAATCTTTCATTTATGTTTATTGGTTCCATTTGCCCTCACACTGTAAATTAGAACACTTCAAACTGCAAAGAAATGTGATTTCATCTCATGTTTGTTTGTTTTATGCTAATAATCCTAGCTGCCCATTGTGTGATTGCCAAAATCCTTCATTCAAAGCTCTTCCCAATCCGTCTCATTGATTCTCGGTCTAGATAGATTTACAAGAGCTACAAAAGTGATGATGATTGACGGGTTGAACTATCTTACGGTCTCGATCTTTTCTTCTCTTTCATTCAATTACTTGAAGAACAGTAGACTCGGTGAAGAGATAACAAGTGTTAAATATATAAATAAACTTAACTCAATTAC ATGGCTGCTGAAGCTCTTACAGAAGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCTGATGGATTCATCACGGTGGAGGAGCTAGGGGCAGCAATTCAGACATTGGATGGACACCCCACCAAGAATGAAGTTAGAGATATGATAAGTGAAGTCGATGTCGACAGTAACGGGACGATAGACTTTGAGGAGTTTCTAAATGTCATGGCAAGGAAAATGAAGGACAATGTTAGTGAGGAGCTAAAAGAAGCCTTTAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGTTGAGAAATGTGATGATAAACTTGGGAGAGAGATTGACAGATGATGAGGCTGAACAGATGATTCGAGAGGCCGATTTGGATGGCGATGGCCGAGTGAGTTACGAAGAGTTTGCGAGGATAATGACAATCAGTTGA MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDDEAEQMIREADLDGDGRVSYEEFARIMTIS Homology
BLAST of CmoCh19G000170 vs. ExPASy Swiss-Prot
Match: P27161 (Calmodulin OS=Solanum lycopersicum OX=4081 GN=CALM1 PE=2 SV=2) HSP 1 Score: 198.7 bits (504), Expect = 4.5e-50 Identity = 100/145 (68.97%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy Swiss-Prot
Match: P27163 (Calmodulin-2 OS=Petunia hybrida OX=4102 GN=CAM72 PE=2 SV=2) HSP 1 Score: 198.0 bits (502), Expect = 7.7e-50 Identity = 99/145 (68.28%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy Swiss-Prot
Match: P13868 (Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2) HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49 Identity = 99/145 (68.28%), Postives = 123/145 (84.83%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy Swiss-Prot
Match: O23320 (Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.7e-49 Identity = 96/147 (65.31%), Postives = 125/147 (85.03%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy Swiss-Prot
Match: P04464 (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3) HSP 1 Score: 194.9 bits (494), Expect = 6.5e-49 Identity = 95/145 (65.52%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy TrEMBL
Match: A0A6J1HLH5 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111464061 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.2e-75 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy TrEMBL
Match: A0A6J1HUX6 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111466922 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74 Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy TrEMBL
Match: A0A1S3BL89 (calmodulin-like OS=Cucumis melo OX=3656 GN=LOC103491266 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72 Identity = 142/149 (95.30%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy TrEMBL
Match: A0A5A7UTD2 (Calmodulin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00850 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71 Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CmoCh19G000170 vs. ExPASy TrEMBL
Match: A0A0A0LLR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G228380 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71 Identity = 141/149 (94.63%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CmoCh19G000170 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 ) HSP 1 Score: 196.8 bits (499), Expect = 1.2e-50 Identity = 96/147 (65.31%), Postives = 125/147 (85.03%), Query Frame = 0
BLAST of CmoCh19G000170 vs. TAIR 10
Match: AT3G22930.1 (calmodulin-like 11 ) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-49 Identity = 92/147 (62.59%), Postives = 125/147 (85.03%), Query Frame = 0
BLAST of CmoCh19G000170 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 ) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-49 Identity = 94/145 (64.83%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of CmoCh19G000170 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 192.2 bits (487), Expect = 3.0e-49 Identity = 94/145 (64.83%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of CmoCh19G000170 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 ) HSP 1 Score: 192.2 bits (487), Expect = 3.0e-49 Identity = 93/145 (64.14%), Postives = 124/145 (85.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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