Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTCAATTACTTAAACCAGGGTTTTCTTTCTTCTTTCATCATTTTACGCGCCGCGAACAATTTCATGTACCTCTAAATTTTCGACATACACAAGAATGAACCCCCAGTATTTCCTCTAATAACTTCAATCTCTACTCATCCTGAATCTCTTTTCGATCCATCATTCCCTTCCCCTGAGCAAGAAATTCTGTGGGTCAGATTCTCCCATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTATGGGACACTGTGTTGGAGCTTACGAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCCAGTGTTTCCTTGCCCTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGTCTCATTTGTTCTAGCATTTTGATTAAAGCTTCTTCGCTTCCTCGAATTGTTATTTAAATGTGTCATATTGAGTGCTTGATTACGTTTTTTTTACCGGAGTCGTTCTAAGTAATACTTTGAATTTGCTTATGGTTCTTGATGTATCCGCGTGGACATTTGTGAAAATAAGTTACCATATGCATAGATTTCGTGCTTTGTTGGGTAACTGCCTTTCTGCTTGCACATCATCCATAATCATCTATAATTTCGTTGTGCTGTAGTTGTCTACTGTTGATATATGTTATCGTCTGTATCTGTTGCCTCTTGTCCAATAATTCACTTCAATTTGCATCAGATACTGGCTTTGAGTGTGGAAGATGTCTGAAACTTGTTACCGTTTTATTTTTCTTCCTCTTTTGTTATACTTCGATTTTTCTCATCCACTATTCACCGTCCAAAGCTGACATATATCACATTTCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGTAGGTTTCATTGCAGTTTACTCGTGTCATTATAGTGGTTAGCCACATTCTCTTTTCATTCTGTTTAACCGTTTTTCTTTCTTGATGGTAAACCTAGAGGAAAGCTTTGCCTTGAGAGGCATTTGGCTGTATAACTCTAAGCAAAGCCAACCACGTCCACATAATGTTCCTTCCTGGAGAAAGACACTAGCTAGGAAGTCTATTTTGAGTTTTATCATGAGTATTGATACCCTCGTGGGGCAAGCTCCAATTAAAAGAAGTTCACTTTGTGGAGATTTTTGGAGTGCTGGATCACCTTATAAAGGCTAGGGTTCAGCAAGTTTCTTTTGTTGACAATATCCTTAAACACGGAATTGCTAGATAGAAATCCTGTTAACATCAAGCTCATCTCTTCAATCTTTCTAATTATCTTCCTTTATGGGTGTTTTGAATTTTCGATTCCTTTTTTTTTTTTTAAATAAAAAAATACGTATTAAAAAATAATGGGAGACATGCCTCAACTTTATTGCACCATCATTTGTTTCATCACCCACCCCCCAGATTTTTATTTTATGCAACTGGAGGAAAAGGCTTCATGAATGATGTTATGGCATTTCAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAATTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAGGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGTAAGAAGTATAATTCTTCCTAACCTTGTTTCTCTTCTCTCTCCGTCATCTTTGATTTCTGAAGGAAAGAAAAGCGTATGGATTTTAAGAATGGCCACATTTCATTGAGACTGCCACTAGTTATTGGAATAACGTATGCTGCTTTAATGTTAAATTAATACAGAATTTTAAGAGCTCAATGAAAACGATTAACATAATACTGCTTTCTGGGTCTTAGGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACCAAACTAATAACTCCAGAGGTCCTTCTGCAGTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAAAATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCCGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTCGAGCGTCTGATTTGTATGAGCTTACAATTTTTATAGTGCTTGAGTGACTCTTCAATTAAATTGAAATTCTAAGTTTCTACAAGAGTTCTATTGATCCAGAGTTATCTGCAGGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGTAGGATCAATTAGTGTTTTGATAAATGAATCATGTTTATCTGTTTATATCCTCTTTATGTTCAGATATTAACTTTGTCCAAAATGATTTCATCTTCACAATTTACTTAATTAGCAGGTCCATTGCCTTGAATTGAGAGATTTTAAGTGATTTCTGTTCTATGATAATTGCATGGTAACTTTATGCTGGCTTATAAAGTTTATACTATGTTCTTCTTTCTCCTTTATATTTTAACTCCAAGATTGGGGGAGATGGATAAAAAAAGCAGCATTGAAGTTCAATCTTTTAATAAGCCTGACGCATGTGGCAGTTTTACTCTGTTTGTGACAATAATCTACTTAAAATACGGTCTCCTTCTGTTGAATTGGGGAAACATACCTTGCAAGAAAATTAAGCATCCATCCCTCTTTTCACTTATACTCCTCTTTATTATTATTTGAGTATTTATTACCTTTAGGTAAAAAAAAAACTCAGGTTTAATCTGCCTCCATCTGGGGGCATTTAACTTACTCCTACCTGCTTATATTTGCTAATTCAAATTTCCATTTTAGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAATCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGATACACCTATTAATTGTTGTAAGTACTTGTTCTTATTTCAGAATTTAACATTGGTTGTATGGATTCTAATGAGCAATGGTCTCTAGAATATTTAAATTGGTGAATATTTGCGTTCTTTTGGAACTTCTAAACATAGTCAATTGACCTGTTCTATCTCCATTCATCTGCAAATTCTAACCCTTAGATTCATCTACAAATGATAACCTTTAGATTCATCTGCAAATGATAACCTTTAGATTCATGCTCAATTTCTCAAGATTTCCTGGGAGTACAATTCTGTTAGAACAGTCAAATCTTTATAAAAGGACATTATTGACTTCATGCTAAAAAATTGCTTGGTTCAGTGGTTGACATTTATTCATCTACAAGTGCAAAATTTTGGATTGACGTTCAATGTTTCAAGAATCATTATTACTGGAATTCTGCTTGAACAATTTATCTTCAATGAAGCACATTATTGAACGTATCCCCAAAATTATTTTATTCTGTGGACAAACTAATTCTAGATGTGGCATAGGATTCTGGCGTGCAAATCTACATAGTATAGTAGTCTTTGTTATTCTGTATATACATCTTAAATTTTAATTTACAATGGTTCTTTTGATCCTTGAAGATTTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCACACACACACACACACACACATTGTTGCATACATATGCATCCGAAATGTATTCTCTTGTGTGGCTAATTTGTGGCCTTTTCTTGTTGCAGCTGGAAATATGCGGCATCTGATTGTTGAGGCTTGTATTTCTAGGAATCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGTGGCAACTCCAGCTTCTAGGTATGCTCCCACAAGTATCTTTTTGTATCATGTAATGCCATATTGAGGGAAGATGATTAATTAAAGGACCAAGTTCAGTACCTAGGTTCTGTATTTTGTTTCCCAAAAAAGTGAATACAGATGCAGCGACTATGTGTTGCAGACAGGGAAGCTGGAAATAGATTTGGATAGCTTCTTGAAGTTATGAAAATTAGGAAGGTGGGGAAAGCTGGGTATTCTAACCAGGTTTAATAGAAGGGGTTGGAGAGAGGTGCTAAATTTTGTTCCCTATTATCCTTCTTTTTGTCAGTTGGGGGGCAAAATATAAGGGGTCACTGAGAGGAATGACAAGAGGGTGAAAATGGGTAATTCATGGTCCAATCAACGGTTGGGTAGACGAAATATTAGTGATTCAGGAAGGTGGCTGACGGGGGGAAACTAGAGATGAGATGAACATAATAAGTAAGATGGATTTATAAACGATTAGATTGATTTCTAACAAGGAGTTTTTTTCCCGGATGAGAAACAAGAGAATATCATTCAAGAGCCAAAAGCCAAAACAAAACAACTTAAGGGACAAGGGAATAAGGCATCCCCTCTTCCGAAGGAAAGAAGTTGATGGTGTCTATCGAGTAGTTACAAGACAACCTGTGTTGCGCACTCCAAGTAGAGGCCATAAACTGTACAAGGTCACAAAAAGAAAGAAGAGAGATCGACTTATCTGTAAACACTCTAGAATTTCTCTCTTTCCAAAGAAGCCAAGGAATAGCCCTATCAAGATTCATCCAAAGCACTCCAGCTTTGTATTTCAGCCACCACTCAGAGAATTTCAACCAACCACAAAACTATACCACGCAGCTTACACCCCTGCAACCCAAACATCTGACCGAATAAATTCCACACTTTTCCAGCGAACTCACGGTGCATCAGCAGATGGGAAGAAGACTCCTCATTTTTACAGCACATAACACACATATTGGGGAGATACACAGGTTGGGGTACCTCCGTTAAACTTTGTCTAGAGTATTTAAGGTCCGTAGTCCACAAAAAAAATGAACTTAGGAATCATCCGTTCCCAAAGCTGAGTACACTATGCTTCATCTAACACTCTTCTCTTTTCTTGAAGAGCAACCAAGGCCAAAGGAACCGTAAATATACCAGACTTATCCAGCTTCAAAAGCAAAGTATCATCCCTTTGAGTGGATTATCTAGTTTCCAATAGCAAGCCTAGCTCACCACCCCTCCAACTCTCTGTCAGAAACCACTTCTCAAACCAAGGTCCCAATCGTTACTGTACACAGTATTGAGAGAATAAAGGACAACTATATACAATAACATATATCATAACCATCCCTCTCAAGCGGGAGCAAATATGTCGATCATGCTCAGCTTGTTGGAGTGATGATTTTCTTGAACCGTTTAAGGCTTTAGTGAGAATATCCCTCAGTTATTCTCCTGTCTTCACATATCAGGTGGGCAGCAACCCTGGTTGTATTTTCTCACAAATAAAATGACATTCAATATGTTTAGTTCACTCATGTAACAATGGAATAGATGCAAATTGAAGTGCAGCTTGATTATCTCACCACAATTTTGCTGGTATTGTATACTAAAGCCTATCTCAGTTAACAATTGATGTATCCACACTATTTCACATATAGTCTGTGCCACAACTCAATATTATGACTCAACACTCGATTATGAAACCACGTTCTGCTTCTTACTCTTCCACGACACTAAATTTCCTCCTACAAAGACAATATGATGACTCAAAGCTTGTGATTTTCTTGGGAGCTTATATCTTTGAGCATTAGTCTCTTTTCATCTCTTCAATAAAAGTTTGGTTCTTGTTAGGAAAGGAAAAAAAAAAAAAAAAGAATACAAGGGAAGGAAGAAAAATTAAGGGAACAAATATGTGAACAAAATAAAAGAGAGAATAACTATGGAATATTTCCACAAGGGTCAATAAGCAACAAAATTATTTGTTGAACAAAAGTCTTTGGGAACGTACAGGTTGTCACCGTAATACATTTATGGAGTTTTATCTACTTCATAAGCGTACATCAGATGCGTTGCAATTTTACCCAGTAGTATGCCAATTAATTTTAACTTAAAGCTCATGGATTTGATGTAAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGTGAATGACAGTTGATGCCTCTGATTTGTATGGCACTGTGTGAAGGTTTTTTCCCCAATATTTTTGTAAAAGATTAATTTTGCATCTGTTCTCCACTATTAACATCTGGGATTATTTTAACCCATTTTCTTCTAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTAAGAATGTTAACCTTGCTTATTTGACCCTGCTGATAAGCATCTGAATCTGAAGTTACGTTTTTATATAATAGATTCTGTGTTCAAGCTTGGGAGAGGTTTTATATATGAATTTATTCTTCATTTATAGCCATTATAAATTAAGTATGAGAGCTGATTTGTTTCGGAGAAGTTTTGAAAGGGTTTGATGCCTGGCTTTTGATAGGTGGGACGGAGGCCTATTGACTAAGAGAAAATTCCTTATAAACCCATTCAAATAATCATTAGATTCAATTTTTGTTTAATAATCTATATCCTTCGGCCGACCTGAAAATAGTTCAAATGACATAAAGTATATACTTTTTGACTAGGAGACTAGAGGTTTGAATCCCACCCTATTGTTGAACTCAAAAATCTGTATCCTTCTTCAATGATTCTGAACATACTTGATTTTTGACATGGAAAAGAATTCGGTTTTAACAGAGTAATTGAGACCTTATTTTCATTGTACTATGAGCTTATTTTTTTCCCCCTTTTTTTTTGCTGTTTGATGCCAGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTGCCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGTGATTTGGCTACAGGCAAGTCTGAAACACTGTTTTAATGAGAAACAAGAAAGGTTAATCTATTACTTAGAATATAAAATTCTGCATGTGGTTTATCTTTTTTGAGAACTTATGATTTCTTTTTGGACTAATACCATTCTCGATGTTTAAATATAGAACTTACCTTCATTTATTGTGATTTGTCATTAAATTAAATGTTTAAATATTACATGTCTAAGTAGATTATTAATACCAAAAAATGAAAAATGTTAGGAACCTGCTCTCTCTCTCTCTCTCTCCCTTCTGTTATTACAAAGAACCCTTTCACTTAATAAGTGGATTATTAATACCTTCAATTCCCGTTGCTCTCTTCCCCTCCTTCCCCACCCTTGCTTCATGCAAATCTACCTTATTAATACAAAATGTCTCTCTTATTATTTGTGGATTATAAATCTAATTTGCTTCCCTTTTTGTTTTGCAAGATTAATAGAGGTTTGGTCTAACATAGAAATAGGTAGCTCATCTAAAGGAGGAGCTAAGACCTCGGTTACAATGGGGATAAGTGTTGTGATACAATTAGACTCAACTTCCAGTAGCTCAATTTCCCTCCCATTCTCCCCCAAATTTGGGACTTGATGAAAATGGACTAATTTTCAAAGAAGTAAACATCCATAGATGTTTACATTTTTCTAGTGGGTGGGGAGTAATATTTTTATTCTTTTTGGTGTGATGTAACCCGGAAAAATGCACTTGATGAATTTTGGATCAAGTTTGGGCTGATGAGGAGGATTGTGAACCGAAGAAAAATACACAAATACTCGAAGAGGTAATTTTAAGGAAAATTTTTGGAGTTGGGGATGGATTTGGAGGAAGACATTTCTAGGAGATTGGAATTTGAGTACTCATCATGACATTCGATATAAAGGAAGGTTGCAGTGAGAATGAATTCTCCCCAAAAAGGATTGGAACATTACTGGGAAGTATAAGAGAAAGAGTTAATCAAGAAGTTGTCCTTTTTTTTCTTCCAGTAATTCCATTTTGTTAAGGAATGCCCACCCATGAACTAGTATAAACAATACCATGAGATGAAAATGAGCCAAGAGTTGAATTGACATCGTCACGAGCATTGTCTCTTCTAAGAACTTTGTGAATTTGTGTACTGCGGGCTTCTTGATGAATCCATATTTGTACCCTTGTGACGGCTTATAGAAAATATATTTCTTCTCAGGATCAATATAGGAACAATCTGTTGTTGGTTTGCTTGGTAAGTTCTTTACCTCATTGTTTCAGGACTCAAAGACCTTGCCGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGTAAATTCTTGATGCGCACTATTGCCGTTTTATTTATAAATATATATATTTTTTTATTAGAACATCTGGAAACTATTTTCCTACTTTTATCAATTTCATTGAGTTAGTATTTGGTTTCTATACTTCTTTTTTAGAAACTAAAACGAAGGTCAAGATAAGAGAGCCCTCCCATCCATTAGAATGGAGATTGAAGAAATGCTCTCTGATTTGAATAAAGGAGGATGGTGATAAAACCTTCATAAAAAAAATTAATGTTACGAAGAGCACCTTTATATTCTCTCAGACGAAATAACAGATGCAATTTCCTAAGCGTCTAGGATATATTCTTCATACAAATATATTAATCTGAATACCTCTCACGGAAGACGATAGAAATGTTAAGAATGATAGCGACTTCATATCAAAGAATTTTTCAAGACAATTCATTAGAGTAACGTCGACGCTTTTTGTACAAATATTCAGTTTTTATCTTCTTAGTGGTGCCATAGTAACAACAGTTTACTTCCTAACTGCCTCGTATCTTTGATTCTTCTTGATAGGAAAGCTTTTTGTAAATAGTCTTTTGGATTGGTGGGTGGGGGAGGGGGGATCTCCTGCCCTTAGATTGTTGCTGTTTTTTGGTCTTTGCAACATATTCACAGGTTTCTTATCAAGAGGAAAAAAAAAAAAAAAAACGAATGACAGTGACTGCGCACTGTTTGAAATGTGATGAAGCTGCAACACATTCACTTGATCTCTCACCAGAGTAACTCTTGAAAAACATAAAAAATTGAATTGGTATTGCATTTTTCATGTGTTTTCTGTTCAACCTAAAATTGAGCTTGAATTGCCTATTTGCAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGCAACTCCAATGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGGTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGCAGCTCCTGGGATTCTCTATCTGCGAGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCCCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCGGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGAACGTTCTCGTGGGGCATAGACTCGATATCATCAGCGTCAAAGAGGCGTGCAAAGCTTCTCGACTCCCACCTCGAATTTCTTGCGAGTGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTCTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGAAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGGAGGAGGATTTTAAATGTTGCAGATTTAACATGAAAAGTGAACCATTTTTGTTTAGAAAAACTGGAACCATCAACTGACGTAGGTTTCCCTTAGCATCATATCCCCAGTAATGCAACGTTCATGTACACAAATGGTTCTTACTGCTGCTCTGCATAGGCATATTAGCCGCCGTTTTTTTTTGGCTAAAAATCTGAAGTAATGATATTCAAAATTTTAGCATGTAATTCCTGTACCATTAAATTTGTAAAAAATATGCAACAATTTAGTCTTCATCC
mRNA sequence
TTTCTTCAATTACTTAAACCAGGGTTTTCTTTCTTCTTTCATCATTTTACGCGCCGCGAACAATTTCATGTACCTCTAAATTTTCGACATACACAAGAATGAACCCCCAGTATTTCCTCTAATAACTTCAATCTCTACTCATCCTGAATCTCTTTTCGATCCATCATTCCCTTCCCCTGAGCAAGAAATTCTGTGGGTCAGATTCTCCCATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTATGGGACACTGTGTTGGAGCTTACGAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCCAGTGTTTCCTTGCCCTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAATTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAGGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACCAAACTAATAACTCCAGAGGTCCTTCTGCAGTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAAAATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCCGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTCGAGCGTCTGATTTGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAATCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGATACACCTATTAATTGTTCTGGAAATATGCGGCATCTGATTGTTGAGGCTTGTATTTCTAGGAATCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGTGGCAACTCCAGCTTCTAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTGCCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGTGATTTGGCTACAGGACTCAAAGACCTTGCCGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGCAACTCCAATGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGGTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGCAGCTCCTGGGATTCTCTATCTGCGAGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCCCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCGGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGAACGTTCTCGTGGGGCATAGACTCGATATCATCAGCGTCAAAGAGGCGTGCAAAGCTTCTCGACTCCCACCTCGAATTTCTTGCGAGTGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTCTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGAAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGGAGGAGGATTTTAAATGTTGCAGATTTAACATGAAAAGTGAACCATTTTTGTTTAGAAAAACTGGAACCATCAACTGACGTAGGTTTCCCTTAGCATCATATCCCCAGTAATGCAACGTTCATGTACACAAATGGTTCTTACTGCTGCTCTGCATAGGCATATTAGCCGCCGTTTTTTTTTGGCTAAAAATCTGAAGTAATGATATTCAAAATTTTAGCATGTAATTCCTGTACCATTAAATTTGTAAAAAATATGCAACAATTTAGTCTTCATCC
Coding sequence (CDS)
ATGGCGGTTTCCGCTCAACCGCCCGGTCAACTGCAGGGGATCGCTGGTGTATGGGACACTGTGTTGGAGCTTACGAAGTCGGCGCAGGAGAAGAACAGCGATCCACTGCTTTGGGCGGTTCAGCTCAGCTCCAGCCTCAATTCGGCCAGTGTTTCCTTGCCCTCTGTCGAGCTCGCCCACCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTCCTTGAGAAGGCAATGACCGCCAGAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATACAGAAAGCTTCGACCTGCAGCATACAGGCTTTACCTGGAACTTCTAAGCAGACACGTCTTTTCATCAACATTGGAAGTCAATGGACCCAATTACCCAAGGATCATGCAAACCATCGATGACGTCCTTCATCTGTCCCAGATATTTGGTCTCCAGACATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCATTTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGAACTTCCTGCAGAAGAAAGATCAGTGTGGCTAATCAGGCCACAACCACATGATATGGAATTAGATGTTCATGATTCTTTTGGTGAGAAGAAAACTGAGAACAGTGAAAATCTGCTTAAGGTGAACACTGCAAAAGCTATTGAGATTATTGGGCAGTTCCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCAAAATATGCCATTGCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACCAAACTAATAACTCCAGAGGTCCTTCTGCAGTGGACATCCGATAAACATAGGTTTTTATCACAAGAAGGAAAAACAAAATCTCAGTTAGAGTTCCATGATGTAATGGCTTCTGGATCGCTCTTTTCTTCCGCCGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTCGAGCGTCTGATTTGCTTGATAAAATCTTTGCGGGCAGTTAATGATGCCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCGTTGCGACTTATTCAAAGGGAAAGGGATCCAAGTGAGGGTCCTGTGCCTCGTTTGGATACATGCTTGTGCATGTTATTGTCAATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGTAGAGATGAGAAGCAATCTTCAGGAAAGCGCCGACAAGGTTTGATTACGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCTCAATCCGTTATTGTAGTAGCCAATCAGGCTGCCGCAAAAGCAGTAATGTTCATATCAGGAGTTGCAGTTGGTAATGAGTACTATGACTGTGTTAGTATGAATGATACACCTATTAATTGTTCTGGAAATATGCGGCATCTGATTGTTGAGGCTTGTATTTCTAGGAATCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATACACGCAGCAGTCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCCTAACTCCGTCAATGGTGAATGCTTTAGTGGCAACTCCAGCTTCTAGCTTAGCGGAGATTGAGAAGATCTATGAGATTGCCATAAATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGAACACACTGTTCTATTTATATCCAGATTATTGTCGCCACCAATTCCTGCAGATTACCCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTACCCCCAAGTCATGGATCCTTACATCTGGGGAAGAACTTACTTGTCATGCAGTGTTCTCCTTGGCTTTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTATTGAAAATGTGAAGGGAGATGCACGGCCTGTGGGATCTCAGCTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCATCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTCAGACGGCTGTCAAAATTGTTGAAATTTTCTTTAGAACCTACATTCATGGATTCCTTTCCAAAATTGAAAGGGTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCCCCCTGGTCTTGTGCCTGGGGCCCCTGTTCATCAAACTGTTGATGCTCTCTTGACCATGATGTTCAAGAAGATAAATCGTGGTGGTCAGTCTTTGACTTCAACTACTTCAGCAAGCAGCAACTCATCTGGATCTGCAAATGAAGAGGCCTCCATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTCGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCCCCGTGATTTGGCTACAGGACTCAAAGACCTTGCCGATTTTCTACCGGCATCCTTTGCTACTATTGTGTGCTACTTTTCAGCTGAAGTTACACGTGGTATATGGAAGCCAGCATTCATGAACGGAACTGATTGGCCTAGTCCTGCTGCAACTTTGTCCGTTGTTGAGCAACAGATTAAAAAGATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTCTAGGAGGAAGTTTTCCAGCTATGCTTCCTTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTCTTGCCCTCGTTGGCCCCGCGCTAAATTCGCTCGTTGCTGGTTGTTCGTGGCCTTGCACACCTATTATAGCCTCATTGTGGGCTCAGAAAGTGAAGCGATGGAATGACTTCCTTGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGCAACTCCAATGTAAACAGCGGTGGAGGTGTAGGCGCACTCCTCGGTCACGGGTTCGGTTCTCACGTTTTAGGAGGGATGTCTCCAGCAGCTCCTGGGATTCTCTATCTGCGAGTGCATCGATGTGTTAGAGATGCTTTGTTCTTGGTGGAGGAGATTGTCTCTCTTTTAATGCTCTCTGTCAAAGACATTGCAGTTACTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAGTCCAAGCATGGAATGAGATGTGAACAGGTTTCTTTTGCTTCTGCAATGGCACGCGTTAAACTTGCAGCTTCCCTTGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTGGTCCAATCTTTGTATAAAGAAACCTTGCCGTCTTGGTTTTTATCGGTCCATTCAGTAGACCGTGAAGGTGTAGAATATGGAGGTATGGTTCCTGTGCTTAGGGGCTATGCACTTGCATTCTTTTCAGTACTTTGTGGAACGTTCTCGTGGGGCATAGACTCGATATCATCAGCGTCAAAGAGGCGTGCAAAGCTTCTCGACTCCCACCTCGAATTTCTTGCGAGTGCATTGGATGGAAAATTCTCCATTGGGTGTGATTGGGCTACATGGCGGGCTTATGTCTCTGGGTTCGTGAGCTTGCTGGTGCGTTGTGCACCGAAGTGGTTGCTCGAGGTGGATTTGAAGGTGTTGAAGAGGTTGGGCAAAGGATTAAGGCAGTTGAACGAGGAGGAATTGGCTCTTGCATTGCTGGAAAGTGGTGGGTTGACTGCAATGGGTGCAGCAGCGGAACTTATTATTGGAGGAGGATTTTAA
Protein sequence
MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIGGGF
Homology
BLAST of CmoCh19G000090 vs. ExPASy Swiss-Prot
Match:
Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)
HSP 1 Score: 1487.6 bits (3850), Expect = 0.0e+00
Identity = 773/1319 (58.61%), Postives = 979/1319 (74.22%), Query Frame = 0
Query: 17 VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
VWD V+ELTK AQE DP LWA QLSS+L +V LPS ELA ++VS+ICWDN+VPI+W
Sbjct: 9 VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68
Query: 77 KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
KFLE+AM ++V PL+V+ALL+ R +P R + AAYR+YLELL R++F+ ++GP+Y
Sbjct: 69 KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128
Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
++M ++ ++L LS++F L T +PG+L+VE F +V LLDA+L DEGLLEL + S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188
Query: 197 IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
++ Q DME+D + + E KT + E L +NT AIE+I +FL+N AR+L L N
Sbjct: 189 VKSQ--DMEIDAPERYNE-KTGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248
Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316
W F Q++QLL NS L+++K++ LLQ S++ S + K S + + ++
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308
Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
GSL S AG HG + S+LWLP+DL EDAMDG QV TSA+E + L K+L+ +N ++WH
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368
Query: 377 NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436
+TFLGLWIAALRL+QRERDP EGP+PRLDT LCM L I L V +IEE + E E
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428
Query: 437 SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496
K R L+TSLQ+LG++ LL PP+ V+ AN+AA KA++F+SG VG
Sbjct: 429 -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488
Query: 497 NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556
+D ++M D P+NCSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P+S ++V
Sbjct: 489 KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548
Query: 557 VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616
WSSF+KG+ L +MVN LV+ PASSLAE+EK++E+A+ GS DEKISAA++LCGASL R
Sbjct: 549 PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608
Query: 617 GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676
GWN+QEHTV +++RLLSPP+PADY ++++LI YA LNV++VGI SVD +QIFSLHGMV
Sbjct: 609 GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668
Query: 677 PLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKG 736
P LA LMPICE FGS TP SW L SGE ++ ++VFS AFTLLL+LWRF+HPPIE+ G
Sbjct: 669 PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728
Query: 737 DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPTFMDSFPKLKG 796
D VGSQLTPE+LL VRNS L S +DR + +RLS++ + S +P F+DSFPKLK
Sbjct: 729 DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788
Query: 797 WYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANE 856
WYRQHQ CIA+ GL G+PVHQTV+ALL M F K+ RG Q+L S +S+SSG+A+E
Sbjct: 789 WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848
Query: 857 EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYF 916
+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATGLKDLADFLPAS ATIV YF
Sbjct: 849 DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908
Query: 917 SAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLP 976
SAEV+RG+WKP FMNG DWPSPA LS VE+ I KILA TGVD+PSLA GGS PA LPLP
Sbjct: 909 SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968
Query: 977 LAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVF 1036
LAA +SLTITYK+DKASER L L GPAL L AGC WPC PI+ASLW QK KRW DFLVF
Sbjct: 969 LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028
Query: 1037 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAP 1096
SASRTVF HN DAV+QLL++CF++TLGL + +++ GGVGALLGHGFGSH GG+SP AP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088
Query: 1097 GILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFA 1156
GILYLR++R +RD + + EEI+SLL+ SV+DIA L KEK EKLK K+G R Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148
Query: 1157 SAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRG 1216
+AM +VKLAASL ASLVW++GG G+V L KET+PSWFLS DRE +V LRG
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208
Query: 1217 YALAFFSVLCGTFSWGIDSISSASKRRAK-LLDSHLEFLASALDGKFSIGCDWATWRAYV 1276
+ALA+F VLCG +WG+DS SSASKRR + +L SHLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268
Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELII 1333
SG VSL+V C P W+ E+D +VLK L GLR+ ++ELA+ LL GGL M AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305
BLAST of CmoCh19G000090 vs. ExPASy Swiss-Prot
Match:
F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)
HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 801/1339 (59.82%), Postives = 955/1339 (71.32%), Query Frame = 0
Query: 17 VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
+W++V L +SAQEKN DPL WA+QL +L SA +SLPS +LA LV+HI W+NH P+ W
Sbjct: 10 LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69
Query: 77 KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
K LEKA++ IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS + P Y
Sbjct: 70 KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129
Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
+ M +IDD+LHLS+ FG+Q EPG +++ FSIVW LLDASLD+EGLLEL + +RS W
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189
Query: 197 IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
PHDM+LD ++ K+ EN + L K NT AIE+I +FLQNK T+RIL LA QNM
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249
Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316
E KT + EFH +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309
Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
GS + SALWLPIDLF ED MDG+Q A SAVE L L+K+L+A N SWH
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369
Query: 377 NTFLGLWIAALRLIQR-------------------ERDPSEGPVPRLDTCLCMLLSITTL 436
+ FL LW+AALRL+QR ERDP EGPVPR DT LC+LLS+T L
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429
Query: 437 AVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIV 496
AV IIEEEE + ++ SPS EK+ GK RQGLI SLQ LG+YESLLTPP+SV
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489
Query: 497 VANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
VANQAAAKA+MFISG+ N Y+ SM+++ C C R L T F
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549
Query: 557 PGYVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAING 616
V + + WS MKGS LTPS+ N+L+ TPASSLAEIEK+YE+A G
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609
Query: 617 SGDEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVL 676
S DEKI+ ASILCGASL RGW++QEH ++FI LLSPP PAD GS S+LI+ APFLNVL
Sbjct: 610 SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669
Query: 677 LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAF 736
LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS P +W L +GE ++ HAVFS AF
Sbjct: 670 LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729
Query: 737 TLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKL 796
TLLLRLWRF HPP++ V GD PVG Q +PEYLLLVRN +L FGKSPKDR+ RR SK+
Sbjct: 730 TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789
Query: 797 LKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQ 856
+ S++P FMDSFP+LK WYRQHQEC+ASI L G+PVH VD+LL+MMFKK N+GG
Sbjct: 790 IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849
Query: 857 SLTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGL 916
+ +S SS+ S S +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATGL
Sbjct: 850 QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909
Query: 917 KDLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGV 976
K LADFLPA+ T+V YFS+EVTRG+WKP MNGTDWPSPAA L+ VEQQI+KILAATGV
Sbjct: 910 KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969
Query: 977 DVPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPI 1036
DVP L G A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL+SL A C WPC PI
Sbjct: 970 DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029
Query: 1037 IASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSGGGVGA 1096
+ SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL S + S GGVGA
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089
Query: 1097 LLGHGFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEK 1156
LLGHGFGS GG+S AAPGILY++VHR +RD +FL EEI+SLLM SVK IA LP +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149
Query: 1157 AEKLKKSKHGMR--CEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFL 1216
AEKLKK+K G R QVS + AM RVKLAASLGASLVWISGG LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209
Query: 1217 SVHSVDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLA 1276
SVH E E GGMVP+LRGYALA+F++L F+WG+DS ASKRR ++L HLEF+
Sbjct: 1210 SVHG---EEDELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269
Query: 1277 SALDGKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELAL 1333
SAL+GK S+GCDWATW+AYV+GFVSL+V+C P W+LEVD++V+KRL K LRQ NE++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1269
BLAST of CmoCh19G000090 vs. ExPASy TrEMBL
Match:
A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)
HSP 1 Score: 2619.0 bits (6787), Expect = 0.0e+00
Identity = 1336/1336 (100.00%), Postives = 1336/1336 (100.00%), Query Frame = 0
Query: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
Query: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
Query: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
Query: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
Query: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
Query: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
Query: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
Query: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG
Sbjct: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
Query: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
Query: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS
Sbjct: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
Query: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS
Sbjct: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
Query: 841 TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA
Sbjct: 841 TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS
Sbjct: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
Query: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL
Sbjct: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
Query: 1081 FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR
Sbjct: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF 1260
EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF
Sbjct: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF 1260
Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
Query: 1321 LTAMGAAAELIIGGGF 1337
LTAMGAAAELIIGGGF
Sbjct: 1321 LTAMGAAAELIIGGGF 1336
BLAST of CmoCh19G000090 vs. ExPASy TrEMBL
Match:
A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)
HSP 1 Score: 2580.4 bits (6687), Expect = 0.0e+00
Identity = 1315/1336 (98.43%), Postives = 1323/1336 (99.03%), Query Frame = 0
Query: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAV LSSSLNSASVSLPSVELA
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60
Query: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVWHLLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180
Query: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
DEGLLELPAEERSVWLIRPQPH+MELDVH+SFGEKKTENSENLLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSDKHRFLSQ
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
Query: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
EGKT SQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTASQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
Query: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLIT LQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITCLQMLGEYESLLTPPQSVIEVAN 480
Query: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
QAAAKAVMFISGVAVGNE YDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNECYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
Query: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
VNTRSSQVPRSASSQ+VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD
Sbjct: 541 VNTRSSQVPRSASSQIVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
Query: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLN+LLVG
Sbjct: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNILLVG 660
Query: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWIL SGEELTCHAVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILASGEELTCHAVFSLAFTLLL 720
Query: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS
Sbjct: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
Query: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS
Sbjct: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
Query: 841 TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
TTS SSNSSGSANEEASIKLKVP+WDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA
Sbjct: 841 TTSGSSNSSGSANEEASIKLKVPSWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS
Sbjct: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
Query: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL
Sbjct: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
Query: 1081 FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
FGSHVLGGMSP APGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTG+PKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGVPKEKAEKLK 1140
Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR
Sbjct: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF 1260
EGVEYGGMVPVLRGYALAFFSVLCG FSWGIDS SSASKRRAK+LDSHLEFLASALDGKF
Sbjct: 1201 EGVEYGGMVPVLRGYALAFFSVLCGMFSWGIDSTSSASKRRAKILDSHLEFLASALDGKF 1260
Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
Query: 1321 LTAMGAAAELIIGGGF 1337
LTAMGAAAELII GGF
Sbjct: 1321 LTAMGAAAELIIEGGF 1336
BLAST of CmoCh19G000090 vs. ExPASy TrEMBL
Match:
A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)
HSP 1 Score: 2419.4 bits (6269), Expect = 0.0e+00
Identity = 1226/1336 (91.77%), Postives = 1276/1336 (95.51%), Query Frame = 0
Query: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
M VS QPP QLQG+AG+WD+VLELTKSAQ+KN DPLLWAVQLSSSLNSA VSLPS+ELA
Sbjct: 1 MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60
Query: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
LLVSHICWDNHVPIMWKFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
RHVFSST ++NGPNY RIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180
Query: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
DEGLL LPAEERS WLIRPQPHDMELDVHDSF EK+TENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
NKKTARIL LAH+NMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLL WTSDKHR LS+
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300
Query: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
EGKT SQ EF +VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKT-SQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERL 360
Query: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
ICLIKSL+AVND SWHNTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT
Sbjct: 361 ICLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
IIIEE+EGELKEEDECSPSK RDEK+ SGK R+GLITSLQMLGEYE LLTPPQSV +AN
Sbjct: 421 IIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIAN 480
Query: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
QAAAKAVMFISGVAVGNEYYDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTS YFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGY 540
Query: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
VN RSSQVPRSAS QVVGWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGD
Sbjct: 541 VNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGD 600
Query: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
EKISAASILCG SLVRGWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLNVLLVG
Sbjct: 601 EKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVG 660
Query: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFG S PKSW+LTSGEELTCHAVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGLSPPKSWVLTSGEELTCHAVFSLAFTLLL 720
Query: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
RLWRFHHPP+ENVK DARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFS
Sbjct: 721 RLWRFHHPPVENVKRDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFS 780
Query: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
LEP FMDSFPKLKGWYRQHQECIASI GLVPGAPVHQ VDALLTMMF+KINRGG SLTS
Sbjct: 781 LEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGHSLTS 840
Query: 841 TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
TTS SSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA
Sbjct: 841 TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
DFLPASFATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPS
Sbjct: 901 DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPS 960
Query: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
LA+GG+ PAMLPLPLAALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASL
Sbjct: 961 LAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASL 1020
Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHG 1080
Query: 1081 FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
FGSHVLGGMSP APGILYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+GLP+EKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLK 1140
Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
K+KHGMR EQVSFASAM+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++R
Sbjct: 1141 KTKHGMRYEQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLER 1200
Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF 1260
EGVEYGGMV VL GYALAFFSVLCGTFSWGIDS+SSASKRRAK+LDSHLEFLASALDGKF
Sbjct: 1201 EGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKF 1260
Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
SIGCDWATWRAYVSGFVSL+VRCAPKW++EVD+ +LKRL GLRQL+EEELALALLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGG 1320
Query: 1321 LTAMGAAAELIIGGGF 1337
+TAMGAAAELII GGF
Sbjct: 1321 VTAMGAAAELIIEGGF 1335
BLAST of CmoCh19G000090 vs. ExPASy TrEMBL
Match:
A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)
HSP 1 Score: 2395.5 bits (6207), Expect = 0.0e+00
Identity = 1227/1336 (91.84%), Postives = 1267/1336 (94.84%), Query Frame = 0
Query: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
MAVSAQPPGQLQGIAG+WDTVLE+TKSAQ+KN DPLLWAVQLSS+LNSA VSLPSVELA
Sbjct: 1 MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60
Query: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120
Query: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
RHVFSST ++ GPNY RIMQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180
Query: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
DEGLL LP EE+S WLIRPQ HDMELDVHDSFGEKKTENSE+LLKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
NKKT RILCLA +NMPL WAGFAQRLQLL ANSVVL N KLITPEVLL WTSDK++ LSQ
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300
Query: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
+GKT SQLEF DVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 KGKT-SQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
Query: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420
ICLIKSLRAVND SWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVT
Sbjct: 361 ICLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVT 420
Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480
IIIEEEE E K ED+CSPSKSRDEKQSSG R+GLITSLQMLGEYESLLTPPQS+I VAN
Sbjct: 421 IIIEEEEVEPK-EDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVAN 480
Query: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
QAAAKAVMFISGVAVGNEYYDC SMND PINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
Query: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
VN SSQVPRSAS+QVVGWSSFMKGS LTPSMVNALVATPASSLAEIEKIYEIAINGSGD
Sbjct: 541 VNALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
Query: 601 EKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVG 660
EKISAASILCGASLVRGW LQEHT LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVG
Sbjct: 601 EKISAASILCGASLVRGWYLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVG 660
Query: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLL 720
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLL 720
Query: 721 RLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFS 780
RLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFS
Sbjct: 721 RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFS 780
Query: 781 LEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTS 840
L+P FMDSFPKLKGWYRQHQECIASI GLVPGAPVHQ VDALLTMMF+KINRGGQSLTS
Sbjct: 781 LQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTS 840
Query: 841 TTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
TTS SSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA
Sbjct: 841 TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 901 DFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPS 960
DFLPASFATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP
Sbjct: 901 DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPC 960
Query: 961 LALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASL 1020
LA+GGS PAMLPLPLAALISLTITYKLDKASERLLALVGPALNSL A CSWPCTPIIASL
Sbjct: 961 LAVGGSSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASL 1020
Query: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHG 1080
WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+ GGVG LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHG 1080
Query: 1081 FGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLK 1140
FGSHVLGGMSP APGILYLRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLK 1140
Query: 1141 KSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDR 1200
K+K+GMR EQVSFASAMARVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHSV+R
Sbjct: 1141 KTKYGMRYEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVER 1200
Query: 1201 EGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKF 1260
EGV YGGMV VLRG+ALAFFSVLCGTFSWGIDS SSASKRRAK+LDS+LEFLASALDGKF
Sbjct: 1201 EGVNYGGMVAVLRGHALAFFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKF 1260
Query: 1261 SIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGG 1320
SIGCDWATWRAYVSGFVSL+VRCAP+WLLEVDL VL RL GLRQLNEEEL L LLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGG 1320
Query: 1321 LTAMGAAAELIIGGGF 1337
+ AMGAAAELII GGF
Sbjct: 1321 VNAMGAAAELIIEGGF 1334
BLAST of CmoCh19G000090 vs. ExPASy TrEMBL
Match:
A0A1S4DXP9 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)
HSP 1 Score: 2150.2 bits (5570), Expect = 0.0e+00
Identity = 1102/1198 (91.99%), Postives = 1135/1198 (94.74%), Query Frame = 0
Query: 139 MQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWLIR 198
MQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVW LLDASLDDEGLL LP EE+S WLIR
Sbjct: 1 MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60
Query: 199 PQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMPLH 258
PQ HDMELDVHDSFGEKKTENSE+LLKVNTAKAIEIIGQFLQNKKT RILCLA +NMPL
Sbjct: 61 PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120
Query: 259 WAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMASGS 318
WAGFAQRLQLL ANSVVL N KLITPEVLL WTSDK++ LSQ+GKT SQLEF DVM+SGS
Sbjct: 121 WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKT-SQLEFRDVMSSGS 180
Query: 319 LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWHNT 378
LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVND SWHNT
Sbjct: 181 LFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNT 240
Query: 379 FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDECSP 438
FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K ED+CSP
Sbjct: 241 FLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPK-EDDCSP 300
Query: 439 SKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVGNE 498
SKSRDEKQSSG R+GLITSLQMLGEYESLLTPPQS+I VANQAAAKAVMFISGVAVGNE
Sbjct: 301 SKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNE 360
Query: 499 YYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQVVG 558
YYDC SMND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYVN SSQVPRSAS+QVVG
Sbjct: 361 YYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVG 420
Query: 559 WSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 618
WSSFMKGS LTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW
Sbjct: 421 WSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 480
Query: 619 NLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 678
LQEHT LFISRLL PPIP DY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL
Sbjct: 481 YLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 540
Query: 679 LAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDAR 738
LAGQLMPICEAFGSS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDAR
Sbjct: 541 LAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDAR 600
Query: 739 PVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQ 798
PVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P FMDSFPKLKGWYRQ
Sbjct: 601 PVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQ 660
Query: 799 HQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASI 858
HQECIASI GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASI
Sbjct: 661 HQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASI 720
Query: 859 KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSAEV 918
KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSAEV
Sbjct: 721 KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEV 780
Query: 919 TRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLAAL 978
TRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVP LA+GGS PAMLPLPLAAL
Sbjct: 781 TRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAAL 840
Query: 979 ISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSASR 1038
ISLTITYKLDKASERLLALVGPALNSL A CSWPCTPIIASLWAQKVKRWNDFLVFSASR
Sbjct: 841 ISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASR 900
Query: 1039 TVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAPGILY 1098
TVFHHNSDAVVQLLKSCFTSTLGLGNSN N+ GGVG LLGHGFGSHVLGGMSP APGILY
Sbjct: 901 TVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHGFGSHVLGGMSPVAPGILY 960
Query: 1099 LRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASAMA 1158
LRVHR VRD LF+VEEIVSLLMLSV+DIAV+GLPKEKAEKLKK+K+GMR EQVSFASAMA
Sbjct: 961 LRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMA 1020
Query: 1159 RVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYALA 1218
RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHSV+REGV YGGMV VLRG+ALA
Sbjct: 1021 RVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVNYGGMVAVLRGHALA 1080
Query: 1219 FFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKFSIGCDWATWRAYVSGFVS 1278
FFSVLCGTFSWGIDS SSASKRRAK+LDS+LEFLASALDGKFSIGCDWATWRAYVSGFVS
Sbjct: 1081 FFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFVS 1140
Query: 1279 LLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIGGGF 1337
L+VRCAP+WLLEVDL VL RL GLRQLNEEEL L LLESGG+ AMGAAAELII GGF
Sbjct: 1141 LIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGGVNAMGAAAELIIEGGF 1196
BLAST of CmoCh19G000090 vs. TAIR 10
Match:
AT3G23590.1 (REF4-related 1 )
HSP 1 Score: 1487.6 bits (3850), Expect = 0.0e+00
Identity = 773/1319 (58.61%), Postives = 979/1319 (74.22%), Query Frame = 0
Query: 17 VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
VWD V+ELTK AQE DP LWA QLSS+L +V LPS ELA ++VS+ICWDN+VPI+W
Sbjct: 9 VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68
Query: 77 KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
KFLE+AM ++V PL+V+ALL+ R +P R + AAYR+YLELL R++F+ ++GP+Y
Sbjct: 69 KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128
Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
++M ++ ++L LS++F L T +PG+L+VE F +V LLDA+L DEGLLEL + S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188
Query: 197 IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
++ Q DME+D + + E KT + E L +NT AIE+I +FL+N AR+L L N
Sbjct: 189 VKSQ--DMEIDAPERYNE-KTGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248
Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316
W F Q++QLL NS L+++K++ LLQ S++ S + K S + + ++
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308
Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
GSL S AG HG + S+LWLP+DL EDAMDG QV TSA+E + L K+L+ +N ++WH
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368
Query: 377 NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436
+TFLGLWIAALRL+QRERDP EGP+PRLDT LCM L I L V +IEE + E E
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428
Query: 437 SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496
K R L+TSLQ+LG++ LL PP+ V+ AN+AA KA++F+SG VG
Sbjct: 429 -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488
Query: 497 NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556
+D ++M D P+NCSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P+S ++V
Sbjct: 489 KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548
Query: 557 VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616
WSSF+KG+ L +MVN LV+ PASSLAE+EK++E+A+ GS DEKISAA++LCGASL R
Sbjct: 549 PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608
Query: 617 GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676
GWN+QEHTV +++RLLSPP+PADY ++++LI YA LNV++VGI SVD +QIFSLHGMV
Sbjct: 609 GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668
Query: 677 PLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKG 736
P LA LMPICE FGS TP SW L SGE ++ ++VFS AFTLLL+LWRF+HPPIE+ G
Sbjct: 669 PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728
Query: 737 DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPTFMDSFPKLKG 796
D VGSQLTPE+LL VRNS L S +DR + +RLS++ + S +P F+DSFPKLK
Sbjct: 729 DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788
Query: 797 WYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANE 856
WYRQHQ CIA+ GL G+PVHQTV+ALL M F K+ RG Q+L S +S+SSG+A+E
Sbjct: 789 WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848
Query: 857 EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYF 916
+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATGLKDLADFLPAS ATIV YF
Sbjct: 849 DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908
Query: 917 SAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLP 976
SAEV+RG+WKP FMNG DWPSPA LS VE+ I KILA TGVD+PSLA GGS PA LPLP
Sbjct: 909 SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968
Query: 977 LAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVF 1036
LAA +SLTITYK+DKASER L L GPAL L AGC WPC PI+ASLW QK KRW DFLVF
Sbjct: 969 LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028
Query: 1037 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAP 1096
SASRTVF HN DAV+QLL++CF++TLGL + +++ GGVGALLGHGFGSH GG+SP AP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088
Query: 1097 GILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFA 1156
GILYLR++R +RD + + EEI+SLL+ SV+DIA L KEK EKLK K+G R Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148
Query: 1157 SAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRG 1216
+AM +VKLAASL ASLVW++GG G+V L KET+PSWFLS DRE +V LRG
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208
Query: 1217 YALAFFSVLCGTFSWGIDSISSASKRRAK-LLDSHLEFLASALDGKFSIGCDWATWRAYV 1276
+ALA+F VLCG +WG+DS SSASKRR + +L SHLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268
Query: 1277 SGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELII 1333
SG VSL+V C P W+ E+D +VLK L GLR+ ++ELA+ LL GGL M AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305
BLAST of CmoCh19G000090 vs. TAIR 10
Match:
AT2G48110.1 (reduced epidermal fluorescence 4 )
HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 801/1339 (59.82%), Postives = 955/1339 (71.32%), Query Frame = 0
Query: 17 VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76
+W++V L +SAQEKN DPL WA+QL +L SA +SLPS +LA LV+HI W+NH P+ W
Sbjct: 10 LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69
Query: 77 KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136
K LEKA++ IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS + P Y
Sbjct: 70 KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129
Query: 137 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196
+ M +IDD+LHLS+ FG+Q EPG +++ FSIVW LLDASLD+EGLLEL + +RS W
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189
Query: 197 IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256
PHDM+LD ++ K+ EN + L K NT AIE+I +FLQNK T+RIL LA QNM
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249
Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316
E KT + EFH +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309
Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376
GS + SALWLPIDLF ED MDG+Q A SAVE L L+K+L+A N SWH
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369
Query: 377 NTFLGLWIAALRLIQR-------------------ERDPSEGPVPRLDTCLCMLLSITTL 436
+ FL LW+AALRL+QR ERDP EGPVPR DT LC+LLS+T L
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429
Query: 437 AVTIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIV 496
AV IIEEEE + ++ SPS EK+ GK RQGLI SLQ LG+YESLLTPP+SV
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489
Query: 497 VANQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
VANQAAAKA+MFISG+ N Y+ SM+++ C C R L T F
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549
Query: 557 PGYVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAING 616
V + + WS MKGS LTPS+ N+L+ TPASSLAEIEK+YE+A G
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609
Query: 617 SGDEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVL 676
S DEKI+ ASILCGASL RGW++QEH ++FI LLSPP PAD GS S+LI+ APFLNVL
Sbjct: 610 SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669
Query: 677 LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPK-SWILTSGEELTCHAVFSLAF 736
LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS P +W L +GE ++ HAVFS AF
Sbjct: 670 LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729
Query: 737 TLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKL 796
TLLLRLWRF HPP++ V GD PVG Q +PEYLLLVRN +L FGKSPKDR+ RR SK+
Sbjct: 730 TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789
Query: 797 LKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQ 856
+ S++P FMDSFP+LK WYRQHQEC+ASI L G+PVH VD+LL+MMFKK N+GG
Sbjct: 790 IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849
Query: 857 SLTSTTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGL 916
+ +S SS+ S S +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATGL
Sbjct: 850 QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909
Query: 917 KDLADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGV 976
K LADFLPA+ T+V YFS+EVTRG+WKP MNGTDWPSPAA L+ VEQQI+KILAATGV
Sbjct: 910 KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969
Query: 977 DVPSLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPI 1036
DVP L G A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL+SL A C WPC PI
Sbjct: 970 DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029
Query: 1037 IASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSGGGVGA 1096
+ SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL S + S GGVGA
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089
Query: 1097 LLGHGFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEK 1156
LLGHGFGS GG+S AAPGILY++VHR +RD +FL EEI+SLLM SVK IA LP +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149
Query: 1157 AEKLKKSKHGMR--CEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFL 1216
AEKLKK+K G R QVS + AM RVKLAASLGASLVWISGG LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209
Query: 1217 SVHSVDREGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLA 1276
SVH E E GGMVP+LRGYALA+F++L F+WG+DS ASKRR ++L HLEF+
Sbjct: 1210 SVHG---EEDELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269
Query: 1277 SALDGKFSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELAL 1333
SAL+GK S+GCDWATW+AYV+GFVSL+V+C P W+LEVD++V+KRL K LRQ NE++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1269
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LUG9 | 0.0e+00 | 58.61 | Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ... | [more] |
F4IN69 | 0.0e+00 | 59.82 | Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HFH4 | 0.0e+00 | 100.00 | mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha... | [more] |
A0A6J1HUY1 | 0.0e+00 | 98.43 | mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima... | [more] |
A0A6J1DPP9 | 0.0e+00 | 91.77 | mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan... | [more] |
A0A1S3BMJ1 | 0.0e+00 | 91.84 | mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum... | [more] |
A0A1S4DXP9 | 0.0e+00 | 91.99 | mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucum... | [more] |