CmoCh18G011510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G011510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr18: 11758675 .. 11760163 (-)
RNA-Seq Expression	CmoCh18G011510
Synteny	CmoCh18G011510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCACAGCTGAGAAAACTGCGGCTAGAACTTTCCAAGTTAATACTCCCTTGTTCAGACTGTAAGCTGTCCTCAAGCAAACAGCTACAATGGTCAAGAAGTACTTCAGTCCATTGTATCCCTGCATTACATCTTTCTCCTCATACAGTCGCCTGAGACACTGTAAGTATGAAACCAACAAAAATTTGTGTTAGTGTTATAACGTTCACCTGTCTAACTTAGATGGAGCTGAAAAGTTCGATGACGAGATTCAAACCTGAAGAAGACGCGACCAATATGGAATAACAGCAATGATGAAACTGAACGTGTTGAATACAGTGTTCTCTCTACAAGTGTTTTGTCGATGTTTGTAATCTCCCCAACCGTAATGGCAAATGTAGAATTCCAAGCTACGAAGTGCTTGCACCTGAATCGATTCAAAGTAATCGTTTGAGGATGTAAGATGCAGGTAATTTCTTGAACTGAAGAACCTTGTGTGTTACTAACCTGGCTCGTGAACTGATCTGCCAAGAAAAAATCAGCAAAGACGACCTGCAGAGGAAGAAAAGTATCCGAAATTAGAGCTAAGTCGAAAGGTCAAATCTCTATCCTTACAATTGTTTTGCTATTTTTTCTAACTTGAAAAGACTATTCCCATCTTTCTTACCATGTAGAGGGGAGCACATATGCAGCGGTACAGAGTTTTTAAGCAGAAGAAGCGACTCGAGCGATATAGGATGTTGAATGGACACAAGAAGACTGCAACCACAACCTGCAAGCAGGGTAAAATGCTAGACTTTTAGCTACAAATTATTGGGTTTTTGGGCAGATGAGTTGGTTTATGTGAGAGTAATCTTACAAGGAGCAAAACTAAAGGTAGAAGTTCAGTCACTGCTTGATATGGCTTGGTTTCAGGGTCCATCTCCATGTCAAGGTTAGAAAGAACACAGGCTAAAGCAAGAGTCGCCACGGCAAAACTGGGAAGCAAAACGTCACGGTATGCCAACTCAGTGCCTTGTTTGAAACCAAAAATGAATGAATAATTCACTTGGTATCTCCTCCAAAAGTATATGTTTGCTGCATACATTAGCAGGTGCAAGACAACGAATCCAAACAGGCTGCATTAAACAAGCAGAAGAATGATTTGATTTGATTTGATTTGATTTGATTTGATTTGCAATGTTTCTGTTTCTCTGTTTTAAGTTACCTGTAAAGAGGAAACATGGTATCCATATACTGGGAGCGGCCTTCTCGGTCGAGTATATGTCGTGCTCGTGTAATGAAAATGAGGGCGACGATAAGAGCTATGGTGCAGCCAGCAAAGAAACCTGAAAATTTTGTTCTAAAATTGATCAGCCAATGTTCAAAACATGAATGAAGAGTCTTGCAAATGTGTCAAGAATGGCTGTTTACCAACTGAAAATGTTGTTCTATGCCTTTCTTTCTTTGCTTTGGGTCTCAAGATATTCATTCCTTTGGTTCGATTAGCATTGCAGAAGTGTTTGA

mRNA sequence

ATGGCAGCCACAGCTGAGAAAACTGCGGCTAGAACTTTCCAAAGGGGAGCACATATGCAGCGGTACAGAGTTTTTAAGCAGAAGAAGCGACTCGAGCGATATAGGATGTTGAATGGACACAAGAAGACTGCAACCACAACCTGCAAGCAGGGGTCCATCTCCATGTCAAGGTTAGAAAGAACACAGGCTAAAGCAAGAGTCGCCACGGCAAAACTGGGAAGCAAAACGTCACGAAGTGTTTGA

Coding sequence (CDS)

ATGGCAGCCACAGCTGAGAAAACTGCGGCTAGAACTTTCCAAAGGGGAGCACATATGCAGCGGTACAGAGTTTTTAAGCAGAAGAAGCGACTCGAGCGATATAGGATGTTGAATGGACACAAGAAGACTGCAACCACAACCTGCAAGCAGGGGTCCATCTCCATGTCAAGGTTAGAAAGAACACAGGCTAAAGCAAGAGTCGCCACGGCAAAACTGGGAAGCAAAACGTCACGAAGTGTTTGA

Protein sequence

MAATAEKTAARTFQRGAHMQRYRVFKQKKRLERYRMLNGHKKTATTTCKQGSISMSRLERTQAKARVATAKLGSKTSRSV

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh18G011510 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh18G011510 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh18G011510 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G011510.1	CmoCh18G011510.1	mRNA