CmoCh18G010600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G010600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Cmo_Chr18: 11230116 .. 11231120 (-)
RNA-Seq Expression	CmoCh18G010600
Synteny	CmoCh18G010600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCGCCCGACACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCCGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGCTTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTACCCGGTTCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCAGCCGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACCGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAGACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTTTGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

mRNA sequence

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCGCCCGACACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCCGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGCTTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTACCCGGTTCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCAGCCGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACCGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAGACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTTTGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

Coding sequence (CDS)

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCGCCCGACACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCCGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGCTTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTACCCGGTTCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCAGCCGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACCGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAGACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTTTGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

Protein sequence

MDQPTTSIKSPPPDTSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL

Homology

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BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-102
Identity = 217/346 (62.72%), Postives = 253/346 (73.12%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSLVLDSADS--SSAV---GGGVEAESRKLPSSRFKGVVPQPNGRWGAQ 64
           TT+ K SPPP  +L L    S  SS V     G+E ESRKLPSS++KGVVPQPNGRWGAQ
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQ 79

Query: 65  IYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSK 124
           IYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   AFL +HSK
Sbjct: 80  IYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLAFLEAHSK 139

Query: 125 AEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLPGSDNEPDSARELLFEKAVTP 184
           AEIVDMLRKHTY DEL Q+ +    LS D   KRNGS    +D +    RE+LFEKAVTP
Sbjct: 140 AEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVLFEKAVTP 199

Query: 185 SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQS 244
           SDVGKLNRLVIPKQHAEK+FPL    + S A +KG+L+NFED  GKVWRFRYSYWNSSQS
Sbjct: 200 SDVGKLNRLVIPKQHAEKHFPL---PSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQS 259

Query: 245 YVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ-TVRL 304
           YVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G   NPVQ  VRL
Sbjct: 260 YVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPRENPVQVVVRL 319

Query: 305 FGVDIMKVTP------SSGCGEKRRREM-EFLSSECNKKQRIVGAL 335
           FGVDI  VT        + CG KR R++ +  +  C+KKQ I+ AL
Sbjct: 320 FGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

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BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.3e-101
Identity = 214/352 (60.80%), Postives = 248/352 (70.45%), Query Frame = 0


Query: 3   QPTTSIK---SPPPDTSLVLDSADS--SSAV---GGGVEAESRKLPSSRFKGVVPQPNGR 62
           +PTT+ +   S PP TS+ L    S  SS V     GVE ESRKLPSS++KGVVPQPNGR
Sbjct: 23  KPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETESRKLPSSKYKGVVPQPNGR 82

Query: 63  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 122
           WGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFRGRDAVTNFK+   G  +D  SAFL+
Sbjct: 83  WGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDG--NDAESAFLD 142

Query: 123 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPD-SARELLFEKA 182
           +HSKAEIVDMLRKHTY DE  QS+R    ++ D KR+G       N+    ARE+LFEK 
Sbjct: 143 AHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDGKRSGLETATYGNDAVLRAREVLFEKT 202

Query: 183 VTPSDVGKLNRLVIPKQHAEKNFPL---QTGSAGSAASSKGLLLNFEDGVGKVWRFRYSY 242
           VTPSDVGKLNRLVIPKQHAEK+FPL    T    + + +KG+L+N ED  GKVWRFRYSY
Sbjct: 203 VTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSY 262

Query: 243 WNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPV 302
           WNSSQSYVLTKGWSRFVKEKNL AGDVV F +STG D+QLYI WK   S         PV
Sbjct: 263 WNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSS---------PV 322

Query: 303 QT-VRLFGVDIMKVTPSSG-------CGEKRRREMEFLSSECNKKQRIVGAL 335
           QT VRLFGV+I  V+            G+KR RE +  S  C+KKQ I+  L
Sbjct: 323 QTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-99
Identity = 206/328 (62.80%), Postives = 239/328 (72.87%), Query Frame = 0


Query: 15  TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 74
           +S+VLDS +       GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE
Sbjct: 40  SSVVLDSEN-------GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 99

Query: 75  DEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDEL 134
           DEAARAYDVA  RFR RDAVTNFK +   ++D+    FLNSHSK+EIVDMLRKHTY +EL
Sbjct: 100 DEAARAYDVAVHRFRRRDAVTNFKDV---KMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 159

Query: 135 HQSKRNAD--------LLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVGKLNRLV 194
            QSKR  +        LL+S    +G    G       + E LFEKAVTPSDVGKLNRLV
Sbjct: 160 EQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGF-----RSAEALFEKAVTPSDVGKLNRLV 219

Query: 195 IPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRF 254
           IPK HAEK+FPL +    S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 220 IPKHHAEKHFPLPS----SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRF 279

Query: 255 VKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIM-KVTP 314
           VKEKNL AGDVVSF +S G+D+QLYI WK     + +GS+ +  + +RLFGV+I  + + 
Sbjct: 280 VKEKNLRAGDVVSFSRSNGQDQQLYIGWK-----SRSGSDLDAGRVLRLFGVNISPESSR 339

Query: 315 SSGCGEKRRREMEFLSSECNKKQRIVGA 334
           +   G KR  + E LS  C+KKQRI  A
Sbjct: 340 NDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.4e-91
Identity = 189/310 (60.97%), Postives = 220/310 (70.97%), Query Frame = 0


Query: 29  GGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRF 88
           GGG      KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  ED+AARAYDVAAQRF
Sbjct: 67  GGGAGGAGGKLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRF 126

Query: 89  RGRDAVTNFKTLSHGQVDDVVS-AFLNSHSKAEIVDMLRKHTYLDELHQSKRN------A 148
           RGRDAVTNF+ L+    D      FL + SKAE+VDMLRKHTY DEL QSKR       +
Sbjct: 127 RGRDAVTNFRPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPS 186

Query: 149 DLLSSDRKRNGSL-LPGSDNEPDSARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQT 208
              ++    NG L  P S   P +AR+ LF+K VTPSDVGKLNRLVIPKQHAEK+FPLQ 
Sbjct: 187 AATTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQL 246

Query: 209 GSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSF 268
            SAG    SKG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F
Sbjct: 247 PSAG--GESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGF 306

Query: 269 LK---STGEDKQLYIEWKASKSAASTGSN------TNPVQTVRLFGVDIM----KVTPSS 318
            +   S G+D +L+I+ K  +S  +  ++       +PV+ VRLFGVD++     V   +
Sbjct: 307 YRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAPAPVEQMA 366

[Close]

BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.3e-91
Identity = 193/318 (60.69%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 15  TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 74
           TS+VL   DS + V   VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE
Sbjct: 36  TSVVL---DSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 95

Query: 75  DEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDEL 134
           DEAARAYDVAA RFRGRDAVTNFK  +  +  +    FLN+HSK+EIVDMLRKHTY +EL
Sbjct: 96  DEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE----FLNAHSKSEIVDMLRKHTYKEEL 155

Query: 135 HQSKRNADLLSSDRKRNGSLLPGSDNEPD-SARELLFEKAVTPSDVGKLNRLVIPKQHAE 194
            Q KRN D   + ++     L            ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 156 DQRKRNRD--GNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 215

Query: 195 KNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLT 254
           K+FPL  G+  +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L 
Sbjct: 216 KHFPLPLGN--NNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLC 275

Query: 255 AGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIMKVTPSSGCGEKR 314
           AGD++SF +S  +D++ +I WK     + +G +    + +RLFGVDI   + ++    K 
Sbjct: 276 AGDLISFKRSNDQDQKFFIGWK-----SKSGLDLETGRVMRLFGVDI---SLNAVVVVKE 333

Query: 315 RREMEFLSSECNKKQRIV 332
             E+   S  C KKQR++
Sbjct: 336 TTEVLMSSLRC-KKQRVL 333

[Close]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL
Match: A0A6J1G259 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita moschata OX=3662 GN=LOC111449999 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.6e-186
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIY 60
           MDQPTTSIKSPPPDTSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 1   MDQPTTSIKSPPPDTSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIY 60

Query: 61  EKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAE 120
           EKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAE
Sbjct: 61  EKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAE 120

Query: 121 IVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVG 180
           IVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVG
Sbjct: 121 IVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVG 180

Query: 181 KLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLT 240
           KLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 KLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLT 240

Query: 241 KGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDI 300
           KGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDI
Sbjct: 241 KGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDI 300

Query: 301 MKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 335
           MKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL
Sbjct: 301 MKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 334

[Close]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL
Match: A0A6J1HUB4 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita maxima OX=3661 GN=LOC111467534 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.5e-173
Identity = 321/340 (94.41%), Postives = 322/340 (94.71%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSL------VLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPP DTSL      VLDSADSS+AVG GVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPLDTSLGGATSIVLDSADSSTAVGCGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK LSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS L GSDNE DSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS-LSGSDNESDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSS 240
           TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA   KGLLLNFEDGVGKVWRFRYSYWNSS
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA---KGLLLNFEDGVGKVWRFRYSYWNSS 240

Query: 241 QSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVR 300
           QSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKS  STGSNTNPVQTVR
Sbjct: 241 QSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSTPSTGSNTNPVQTVR 300

Query: 301 LFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 335
           LFGVDIMKVTPSSGC EKRRREMEFLSSECNKKQRIVGAL
Sbjct: 301 LFGVDIMKVTPSSGCSEKRRREMEFLSSECNKKQRIVGAL 336

[Close]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL
Match: A0A5A7SZL8 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00730 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.4e-149
Identity = 281/342 (82.16%), Postives = 301/342 (88.01%), Query Frame = 0


Query: 5   TTSIKSPPPD----------TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPD          TS+VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDNSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRKRN  LL GSD+EP++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRN-RLLSGSDDEPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWN 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT   GS ASSKGLLLNFEDG GKVWRFRYSYWN
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT---GSTASSKGLLLNFEDGGGKVWRFRYSYWN 250

Query: 245 SSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQT 304
           SSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K++ +TGS  NPVQT
Sbjct: 251 SSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINPVQT 310

Query: 305 VRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 335
            RLFGVDI+K +P+SGC EKRRRE+EFL+ +C KKQRIVGAL
Sbjct: 311 FRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL
Match: A0A1S3BG02 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo OX=3656 GN=LOC103489254 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.4e-149
Identity = 281/342 (82.16%), Postives = 301/342 (88.01%), Query Frame = 0


Query: 5   TTSIKSPPPD----------TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPD          TS+VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDNSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRKRN  LL GSD+EP++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRN-RLLSGSDDEPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWN 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT   GS ASSKGLLLNFEDG GKVWRFRYSYWN
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT---GSTASSKGLLLNFEDGGGKVWRFRYSYWN 250

Query: 245 SSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQT 304
           SSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K++ +TGS  NPVQT
Sbjct: 251 SSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINPVQT 310

Query: 305 VRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 335
            RLFGVDI+K +P+SGC EKRRRE+EFL+ +C KKQRIVGAL
Sbjct: 311 FRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL
Match: A0A0A0KR17 (DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.9e-148
Identity = 279/342 (81.58%), Postives = 300/342 (87.72%), Query Frame = 0


Query: 5   TTSIKSPPPDTSL----------VLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPDTSL          VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDTSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRK+N   L GSD++P++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKQN-RFLSGSDDDPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWN 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT   GS ASSKGLLLNFEDG GKVWRFRYSYWN
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT---GSTASSKGLLLNFEDGGGKVWRFRYSYWN 250

Query: 245 SSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQT 304
           SSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K + +TGS  NPVQT
Sbjct: 251 SSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKPSTTTGSAINPVQT 310

Query: 305 VRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 335
            RLFGVDI+KV+P+SGC EKRRRE+EFL+ +C KKQR+VGAL
Sbjct: 311 FRLFGVDIIKVSPNSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

[Close]

BLAST of CmoCh18G010600 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-103
Identity = 217/346 (62.72%), Postives = 253/346 (73.12%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSLVLDSADS--SSAV---GGGVEAESRKLPSSRFKGVVPQPNGRWGAQ 64
           TT+ K SPPP  +L L    S  SS V     G+E ESRKLPSS++KGVVPQPNGRWGAQ
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQ 79

Query: 65  IYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSK 124
           IYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   AFL +HSK
Sbjct: 80  IYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLAFLEAHSK 139

Query: 125 AEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLPGSDNEPDSARELLFEKAVTP 184
           AEIVDMLRKHTY DEL Q+ +    LS D   KRNGS    +D +    RE+LFEKAVTP
Sbjct: 140 AEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVLFEKAVTP 199

Query: 185 SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQS 244
           SDVGKLNRLVIPKQHAEK+FPL    + S A +KG+L+NFED  GKVWRFRYSYWNSSQS
Sbjct: 200 SDVGKLNRLVIPKQHAEKHFPL---PSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQS 259

Query: 245 YVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ-TVRL 304
           YVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G   NPVQ  VRL
Sbjct: 260 YVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPRENPVQVVVRL 319

Query: 305 FGVDIMKVTP------SSGCGEKRRREM-EFLSSECNKKQRIVGAL 335
           FGVDI  VT        + CG KR R++ +  +  C+KKQ I+ AL
Sbjct: 320 FGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of CmoCh18G010600 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-103
Identity = 217/346 (62.72%), Postives = 253/346 (73.12%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSLVLDSADS--SSAV---GGGVEAESRKLPSSRFKGVVPQPNGRWGAQ 64
           TT+ K SPPP  +L L    S  SS V     G+E ESRKLPSS++KGVVPQPNGRWGAQ
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQ 79

Query: 65  IYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSK 124
           IYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   AFL +HSK
Sbjct: 80  IYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLAFLEAHSK 139

Query: 125 AEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLPGSDNEPDSARELLFEKAVTP 184
           AEIVDMLRKHTY DEL Q+ +    LS D   KRNGS    +D +    RE+LFEKAVTP
Sbjct: 140 AEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVLFEKAVTP 199

Query: 185 SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQS 244
           SDVGKLNRLVIPKQHAEK+FPL    + S A +KG+L+NFED  GKVWRFRYSYWNSSQS
Sbjct: 200 SDVGKLNRLVIPKQHAEKHFPL---PSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQS 259

Query: 245 YVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ-TVRL 304
           YVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G   NPVQ  VRL
Sbjct: 260 YVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPRENPVQVVVRL 319

Query: 305 FGVDIMKVTP------SSGCGEKRRREM-EFLSSECNKKQRIVGAL 335
           FGVDI  VT        + CG KR R++ +  +  C+KKQ I+ AL
Sbjct: 320 FGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of CmoCh18G010600 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.3e-102
Identity = 214/352 (60.80%), Postives = 248/352 (70.45%), Query Frame = 0


Query: 3   QPTTSIK---SPPPDTSLVLDSADS--SSAV---GGGVEAESRKLPSSRFKGVVPQPNGR 62
           +PTT+ +   S PP TS+ L    S  SS V     GVE ESRKLPSS++KGVVPQPNGR
Sbjct: 23  KPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETESRKLPSSKYKGVVPQPNGR 82

Query: 63  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 122
           WGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFRGRDAVTNFK+   G  +D  SAFL+
Sbjct: 83  WGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDG--NDAESAFLD 142

Query: 123 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPD-SARELLFEKA 182
           +HSKAEIVDMLRKHTY DE  QS+R    ++ D KR+G       N+    ARE+LFEK 
Sbjct: 143 AHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDGKRSGLETATYGNDAVLRAREVLFEKT 202

Query: 183 VTPSDVGKLNRLVIPKQHAEKNFPL---QTGSAGSAASSKGLLLNFEDGVGKVWRFRYSY 242
           VTPSDVGKLNRLVIPKQHAEK+FPL    T    + + +KG+L+N ED  GKVWRFRYSY
Sbjct: 203 VTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSY 262

Query: 243 WNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPV 302
           WNSSQSYVLTKGWSRFVKEKNL AGDVV F +STG D+QLYI WK   S         PV
Sbjct: 263 WNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSS---------PV 322

Query: 303 QT-VRLFGVDIMKVTPSSG-------CGEKRRREMEFLSSECNKKQRIVGAL 335
           QT VRLFGV+I  V+            G+KR RE +  S  C+KKQ I+  L
Sbjct: 323 QTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of CmoCh18G010600 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 364.8 bits (935), Expect = 7.5e-101
Identity = 206/328 (62.80%), Postives = 239/328 (72.87%), Query Frame = 0


Query: 15  TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 74
           +S+VLDS +       GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE
Sbjct: 40  SSVVLDSEN-------GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 99

Query: 75  DEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDEL 134
           DEAARAYDVA  RFR RDAVTNFK +   ++D+    FLNSHSK+EIVDMLRKHTY +EL
Sbjct: 100 DEAARAYDVAVHRFRRRDAVTNFKDV---KMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 159

Query: 135 HQSKRNAD--------LLSSDRKRNGSLLPGSDNEPDSARELLFEKAVTPSDVGKLNRLV 194
            QSKR  +        LL+S    +G    G       + E LFEKAVTPSDVGKLNRLV
Sbjct: 160 EQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGF-----RSAEALFEKAVTPSDVGKLNRLV 219

Query: 195 IPKQHAEKNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRF 254
           IPK HAEK+FPL +    S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 220 IPKHHAEKHFPLPS----SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRF 279

Query: 255 VKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIM-KVTP 314
           VKEKNL AGDVVSF +S G+D+QLYI WK     + +GS+ +  + +RLFGV+I  + + 
Sbjct: 280 VKEKNLRAGDVVSFSRSNGQDQQLYIGWK-----SRSGSDLDAGRVLRLFGVNISPESSR 339

Query: 315 SSGCGEKRRREMEFLSSECNKKQRIVGA 334
           +   G KR  + E LS  C+KKQRI  A
Sbjct: 340 NDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of CmoCh18G010600 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 335.9 bits (860), Expect = 3.8e-92
Identity = 193/318 (60.69%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 15  TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 74
           TS+VL   DS + V   VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE
Sbjct: 36  TSVVL---DSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 95

Query: 75  DEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDEL 134
           DEAARAYDVAA RFRGRDAVTNFK  +  +  +    FLN+HSK+EIVDMLRKHTY +EL
Sbjct: 96  DEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE----FLNAHSKSEIVDMLRKHTYKEEL 155

Query: 135 HQSKRNADLLSSDRKRNGSLLPGSDNEPD-SARELLFEKAVTPSDVGKLNRLVIPKQHAE 194
            Q KRN D   + ++     L            ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 156 DQRKRNRD--GNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 215

Query: 195 KNFPLQTGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLT 254
           K+FPL  G+  +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L 
Sbjct: 216 KHFPLPLGN--NNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLC 275

Query: 255 AGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIMKVTPSSGCGEKR 314
           AGD++SF +S  +D++ +I WK     + +G +    + +RLFGVDI   + ++    K 
Sbjct: 276 AGDLISFKRSNDQDQKFFIGWK-----SKSGLDLETGRVMRLFGVDI---SLNAVVVVKE 333

Query: 315 RREMEFLSSECNKKQRIV 332
             E+   S  C KKQR++
Sbjct: 336 TTEVLMSSLRC-KKQRVL 333

The following BLAST results are available for this feature:

BLAST of CmoCh18G010600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82280	2.3e-102	62.72	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9C6M5	3.3e-101	60.80	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9ZWM9	1.1e-99	62.80	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q8RZX9	2.4e-91	60.97	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]
Q9LS06	5.3e-91	60.69	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]

BLAST of CmoCh18G010600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G259	1.6e-186	100.00	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A6J1HUB4	7.5e-173	94.41	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A5A7SZL8	4.4e-149	82.16	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A1S3BG02	4.4e-149	82.16	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A0A0KR17	2.9e-148	81.58	DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1	[more]

BLAST of CmoCh18G010600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68840.1	1.6e-103	62.72	related to ABI3/VP1 2	[more]
AT1G68840.2	1.6e-103	62.72	related to ABI3/VP1 2	[more]
AT1G25560.1	2.3e-102	60.80	AP2/B3 transcription factor family protein	[more]
AT1G13260.1	7.5e-101	62.80	related to ABI3/VP1 1	[more]
AT3G25730.1	3.8e-92	60.69	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 170..278 e-value: 9.1E-21 score: 85.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 170..274 e-value: 1.2E-26 score: 92.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 170..278 score: 13.408356
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 169..260 e-value: 2.80279E-25 score: 95.8576
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 43..104 e-value: 7.3E-29 score: 111.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 42..90 e-value: 3.6E-9 score: 36.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 43..98 score: 20.059746
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 42..97 e-value: 7.70466E-26 score: 96.1866
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 158..287 e-value: 2.7E-44 score: 151.7
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 168..264
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 42..99 e-value: 3.5E-20 score: 73.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31140:SF115	PROTEIN RAV1, PUTATIVE-RELATED	coord: 15..334
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 15..334
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 42..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G010600.1	CmoCh18G010600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity