CmoCh18G009990 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCGTTAATACGAAAAGAGAAATTCAGTAAGGAGTGGCTAGGTAACGCTTCGACGGGAAACGGACAGTCGATTTGAATTTCCCGGCCGGCTAGGACGAAGATTGATCGGAGAAGAAAAGGAAGAGTTTAGATTTCGAGGTCTTTGACAATGGCGAGTCTCCTTCTTTCTTTAATTTTATCGGCACGGAATTCTTTTATGTATCATTACTACTCATGGTTTTCCCAACACACTTCGTGATTCTTACTTTTGAGTTCTTATTTTCAGGCGGATTCCGCTGAGGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCACTCTGTTGTTTGTCTCGATGGTAATCGTTCTCAAGCTTAAGTTAAATTTGAATTTCATGAAGTTGGAATCTTCCATTTCACTGTGTTTTTGAAGTTTTTATAACTGTCGCTTCAGAGATAAATTTCGAAATTGATTTTCCTTGTGCTCGTAGTCATGGTTGGTAACCTGGTGTTTTATTTTTCTTCTGCTTGGACTAAAATCAGACGAGGATTCGGACGTAGAGGAGTCTCGTGTACCTTTTTCAAAGCGAACGAAGATTTCAAATTCAGCGGTATATAATTACCTTCATGTAGTGAAATTGCAGACTTTCTGTTAGCAGAGGATTAATGTTCGTTGGAACAGTCAGTAAAGCTAGTTTTATGTGATTCTTTCCTTTCAATCAATATTTAGGTTACGAATTTTGTGGAAAATCCATTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGGAAGATTCGACATTGAAGAAGTTAAGGTATTCCATCCTAGTAACATGCATCTATTGCTTGATTAATTCACTTTTATTTCAACATGGAAACCTTAGGGCTTGTTTAGTAGGCAGTCTTGGCAATGAATTTTATAAACAAGGGATTCAACGAAAATAGGGTTGTATTCAGATATATGTTTGATAGCTGATTTTGAAATTGAATTCCAATTTGAACAATAATTCAAAATCTGCTCTATAATATGGAACTAGTTGTAGTTACAGAACTGAATATTAGGTTGAATATAAATCACTATTAATTGATTTTTTATTTATAAATTTTGTATAATCATTATTTTGCAATATCATACAATTTATAATATATGTATTTTAATTTAACAAAAATAAATTGAGTTTATAATATGAAATAGTATATTTTCTTAAGTTTTATCTTTTTTAATATAATTTTGCATTTTAAATTTTCAAATTCAAAATCTGGATACAGTGAAAACACAAAAAAGTTGTTTTTCAAATTTTTTTATTACCTAGTTGGGAAACAATTTTCGAAAACACATACGCCAAATGCATACACTCACTAGACTCGGTGAATTGAAAAACATGAAGCAGAATCGAGATTGTCTACCAAAAAAACCCTTATTTTTTTTTCTCTGCATAGGATTCTATGGCATGTCTCTTGCCATTTTGCCTTGGCATATCATATGTAATCTGCACTTATAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCTCTATCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAGAGTGGATGTTGAAAACACGCCCCAAGTCTCCCTGGAGCCTGCTTTGGATGACCAAGCTCCAATTGCTTCTAAAGAAAGAGAAAAGATTGTTATTTCTGTACGAGATAGTGACAAGGAAGAGCTCCAACAGTTTCGCCTGTTTGTGGTATGTTCTTGTGCATGATTCCATGTTATCCACAATTCAGACTTGCATTCTTCAAGTACAACAACCATCCTGTTTTGTCAACATTCCTCATGATTTGCTATAGCTGTTTTTGATGTACTCTCAAGATGCCTTTAATTTGCCCAATAATCTGGTTGGCATGTTTAGAATCATATGTAGGGAAATGAATGAATTTGGTGAACTATGGTAGATTGCTTAACATACGTATCATGGTTCATATTATACATCAGCTAATCTTGAAACATTGATTTAAAAAAAAAAAAAAAAGGTGAACAAATTTGAACTTCGTCCTTTAAATTCCCATCTTGGGAGAGGTAGTTCCTTTAGTATCTGGGTTCATGACTTGGTTACTGTATAATTGTCAATAGTCATGAGCCGCATGTACCCTTTAATTTGATTTTTTTGTCTTTCCTTTCCACGTTATGATTGGCTTAACTCCCCATTGTGGGGTGATCATTAGATTTGAACCGAGATGTTATTCATTACTTTTGTTACATTAGTGTTCTGTTCTTTGAATTATTGTACTTTCTATGATTCATACTCATTTAGACTATGATGAAAGTGTTACGAGTCTCCATTGGTGATGGTAGTTCAGACATTATTTGATTGAATTACTTCAGAAGAGTCTCCCTGATCTTCATATTTTCTGTCATCATATCAGTTAGATTGTTGTTGAAATTAGCTTTCTTTTGTCATTGCCTTCGGCACGGGAGCGCCGCTATAGGCCCTCAGTATTTCAAGCATGTTTGAGATGATTTTGAAATTATTGCAACCACTTTTTTCACCATGTGTTCCATATCTAAAATTTGAATGTTTTTACAGGATGACAAGTTCGAGCGACTTTTCAAAATGTACTCAAACAAACTTAAAATCGACCCCAAGAGTTTGGTTTTCGTTTTTGATGGGGATAAAGTCGGGCCAGATGATACCCCAGTCGGCCTCGGCATGGAAGACGATGATATGATTGAAGTGAACATCAAGTCGAGTTGAATAAAAAGGTGTCTTTTCAATGTATATTTGAGGACTAATTCACCGGTTATGGGACGCAAGACTTAGGATGGAAGGCTGTCGAGGTCCCTTTGTCTGGTAATAACAGTCGTTTGGTATGCACATTGAGATCAATGGAAAAATAAAAATTATGGAGAATATGAATTTTTATAGATATGTTCTCTCTCTCTCTCTCCCTCTCCTCTTCCTCTCCCCTTCTCTCCTCTCCTCCGACGTCATCCTCTCCGCTGCTCCCTCCACCGGTCACCGGTGACTTAATCATGTAATTACACAATAAAATTGTATTAACCTTCCATTTCTCTCTGTAC ACCCGTTAATACGAAAAGAGAAATTCAGTAAGGAGTGGCTAGGTAACGCTTCGACGGGAAACGGACAGTCGATTTGAATTTCCCGGCCGGCTAGGACGAAGATTGATCGGAGAAGAAAAGGAAGAGTTTAGATTTCGAGGTCTTTGACAATGGCGGATTCCGCTGAGGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCACTCTGTTGTTTGTCTCGATGACGAGGATTCGGACGTAGAGGAGTCTCGTGTACCTTTTTCAAAGCGAACGAAGATTTCAAATTCAGCGGTTACGAATTTTGTGGAAAATCCATTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGGAAGATTCGACATTGAAGAAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCTCTATCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAGAGTGGATGTTGAAAACACGCCCCAAGTCTCCCTGGAGCCTGCTTTGGATGACCAAGCTCCAATTGCTTCTAAAGAAAGAGAAAAGATTGTTATTTCTGTACGAGATAGTGACAAGGAAGAGCTCCAACAGTTTCGCCTGTTTGTGGATGACAAGTTCGAGCGACTTTTCAAAATGTACTCAAACAAACTTAAAATCGACCCCAAGAGTTTGGTTTTCGTTTTTGATGGGGATAAAGTCGGGCCAGATGATACCCCAGTCGGCCTCGGCATGGAAGACGATGATATGATTGAAGTGAACATCAAGTCGAGTTGAATAAAAAGGTGTCTTTTCAATGTATATTTGAGGACTAATTCACCGGTTATGGGACGCAAGACTTAGGATGGAAGGCTGTCGAGGTCCCTTTGTCTGGTAATAACAGTCGTTTGGTATGCACATTGAGATCAATGGAAAAATAAAAATTATGGAGAATATGAATTTTTATAGATATGTTCTCTCTCTCTCTCTCCCTCTCCTCTTCCTCTCCCCTTCTCTCCTCTCCTCCGACGTCATCCTCTCCGCTGCTCCCTCCACCGGTCACCGGTGACTTAATCATGTAATTACACAATAAAATTGTATTAACCTTCCATTTCTCTCTGTAC ATGGCGGATTCCGCTGAGGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCACTCTGTTGTTTGTCTCGATGACGAGGATTCGGACGTAGAGGAGTCTCGTGTACCTTTTTCAAAGCGAACGAAGATTTCAAATTCAGCGGTTACGAATTTTGTGGAAAATCCATTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGGAAGATTCGACATTGAAGAAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCTCTATCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAGAGTGGATGTTGAAAACACGCCCCAAGTCTCCCTGGAGCCTGCTTTGGATGACCAAGCTCCAATTGCTTCTAAAGAAAGAGAAAAGATTGTTATTTCTGTACGAGATAGTGACAAGGAAGAGCTCCAACAGTTTCGCCTGTTTGTGGATGACAAGTTCGAGCGACTTTTCAAAATGTACTCAAACAAACTTAAAATCGACCCCAAGAGTTTGGTTTTCGTTTTTGATGGGGATAAAGTCGGGCCAGATGATACCCCAGTCGGCCTCGGCATGGAAGACGATGATATGATTGAAGTGAACATCAAGTCGAGTTGA MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVENPFVEIEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEESARVDVENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYSNKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS Homology
BLAST of CmoCh18G009990 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.2e-05 Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of CmoCh18G009990 vs. ExPASy TrEMBL
Match: A0A6J1G027 (uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC111449468 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of CmoCh18G009990 vs. ExPASy TrEMBL
Match: A0A6J1HTX5 (uncharacterized protein LOC111467764 OS=Cucurbita maxima OX=3661 GN=LOC111467764 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105 Identity = 206/221 (93.21%), Postives = 212/221 (95.93%), Query Frame = 0
BLAST of CmoCh18G009990 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89 Identity = 181/225 (80.44%), Postives = 197/225 (87.56%), Query Frame = 0
BLAST of CmoCh18G009990 vs. ExPASy TrEMBL
Match: A0A6J1JEF8 (uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.8e-88 Identity = 179/225 (79.56%), Postives = 197/225 (87.56%), Query Frame = 0
BLAST of CmoCh18G009990 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 8.4e-88 Identity = 182/225 (80.89%), Postives = 196/225 (87.11%), Query Frame = 0
BLAST of CmoCh18G009990 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 169.5 bits (428), Expect = 3.1e-42 Identity = 100/222 (45.05%), Postives = 140/222 (63.06%), Query Frame = 0
BLAST of CmoCh18G009990 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.5e-04 Identity = 23/69 (33.33%), Postives = 43/69 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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