CmoCh18G009860 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGAGAAGAATTCATTTGGTGAAGCAATAGAAACCCTAAGATCTAATGGATATTCTTCAATGGCGTTGTTTCTTGAATCTCAGATTTTAAGATTTAGTAATGGTCAGTCCACGATGACAGTCTTTGCTCCTTCAGATGATACATTGGCCGCTCGCATTGATGACTTTACCGATTATCCTTCTCTGTATTGTAGAATCTTATGGAATGATCTTATGGATCTTGAGAAAGGCACGAAGTTATCTACATATTCAAAAGGATTTGCAATTTCCGTTGCGAAATCAAACGGCATATTGATGATCAATGGAGTTGCAGTCATCTATCCTAACATGTATGTGAACGATTGGCTGCTTGTTCATGGCCTCCTGGATGTTTTTTCTATGGCAGAGAGACTCTCAGCAAAGGAATCAGGCTCAGAAATGAGAAACATCACTCATGGGTTGGCACTGGATCATTGGTAA ATGACGGAGAAGAATTCATTTGGTGAAGCAATAGAAACCCTAAGATCTAATGGATATTCTTCAATGGCGTTGTTTCTTGAATCTCAGATTTTAAGATTTAGTAATGGTCAGTCCACGATGACAGTCTTTGCTCCTTCAGATGATACATTGGCCGCTCGCATTGATGACTTTACCGATTATCCTTCTCTGTATTGTAGAATCTTATGGAATGATCTTATGGATCTTGAGAAAGGCACGAAGTTATCTACATATTCAAAAGGATTTGCAATTTCCGTTGCGAAATCAAACGGCATATTGATGATCAATGGAGTTGCAGTCATCTATCCTAACATGTATGTGAACGATTGGCTGCTTGTTCATGGCCTCCTGGATGTTTTTTCTATGGCAGAGAGACTCTCAGCAAAGGAATCAGGCTCAGAAATGAGAAACATCACTCATGGGTTGGCACTGGATCATTGGTAA ATGACGGAGAAGAATTCATTTGGTGAAGCAATAGAAACCCTAAGATCTAATGGATATTCTTCAATGGCGTTGTTTCTTGAATCTCAGATTTTAAGATTTAGTAATGGTCAGTCCACGATGACAGTCTTTGCTCCTTCAGATGATACATTGGCCGCTCGCATTGATGACTTTACCGATTATCCTTCTCTGTATTGTAGAATCTTATGGAATGATCTTATGGATCTTGAGAAAGGCACGAAGTTATCTACATATTCAAAAGGATTTGCAATTTCCGTTGCGAAATCAAACGGCATATTGATGATCAATGGAGTTGCAGTCATCTATCCTAACATGTATGTGAACGATTGGCTGCTTGTTCATGGCCTCCTGGATGTTTTTTCTATGGCAGAGAGACTCTCAGCAAAGGAATCAGGCTCAGAAATGAGAAACATCACTCATGGGTTGGCACTGGATCATTGGTAA MTEKNSFGEAIETLRSNGYSSMALFLESQILRFSNGQSTMTVFAPSDDTLAARIDDFTDYPSLYCRILWNDLMDLEKGTKLSTYSKGFAISVAKSNGILMINGVAVIYPNMYVNDWLLVHGLLDVFSMAERLSAKESGSEMRNITHGLALDHW Homology
BLAST of CmoCh18G009860 vs. ExPASy Swiss-Prot
Match: Q9FGW0 (Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=FLA20 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.7e-16 Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0
BLAST of CmoCh18G009860 vs. ExPASy TrEMBL
Match: A0A6J1G1W2 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111449908 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.5e-64 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmoCh18G009860 vs. ExPASy TrEMBL
Match: A0A6J1H1S8 (putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111458798 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 9.0e-57 Identity = 112/159 (70.44%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of CmoCh18G009860 vs. ExPASy TrEMBL
Match: A0A6J1J2F0 (putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111482042 PE=3 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55 Identity = 109/156 (69.87%), Postives = 133/156 (85.26%), Query Frame = 0
BLAST of CmoCh18G009860 vs. ExPASy TrEMBL
Match: A0A6J1HVX4 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111467360 PE=3 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53 Identity = 108/128 (84.38%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of CmoCh18G009860 vs. ExPASy TrEMBL
Match: A0A0A0KUM5 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G611680 PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 111/160 (69.38%), Postives = 131/160 (81.88%), Query Frame = 0
BLAST of CmoCh18G009860 vs. TAIR 10
Match: AT5G40940.1 (putative fasciclin-like arabinogalactan protein 20 ) HSP 1 Score: 85.5 bits (210), Expect = 4.0e-17 Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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