CmoCh18G007890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G007890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	homeobox protein knotted-1-like 6
Location	Cmo_Chr18: 9414147 .. 9420399 (-)
RNA-Seq Expression	CmoCh18G007890
Synteny	CmoCh18G007890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAATGTACGGTTTGCAATCGACGGCGGAGTATTCTGATAAGGCGTTGATGTCACCGGAGAATCTGATTCTGCCTCCGGATTATCAGAGCCTACTGGTTACTTCTGGAGAGTTTCGCGATCGGATTCCGGTGTTTGGATCCAACGAACTGCTTTCGGCGGCGGCTTCGGTGATTTCGGAAGCTGAAGCAGCGTCGATCACGATGGAAATTCAATGTGAAGAAGATATGGTGAACGTGATCAAAGCTAAAATTTCTTCTCATCCTACTTATCCTCGATTGCTCGACGCCTATATTGACTGCCAAAAGGTGAACCGGTAGCTCTCTTTCTCTATCAGCCAGAGGAAAAAAAAAACGCCGGCGGTTCACTGCGCAGTTTCTCGCACTGTGCTTTGAGTTTTTGACACGGACACCTTACGAAAATTCTAAATCCTGAATCCTAATCCTCTCTTCTTCTTTCTTAATTATTTTTTTTTTCTCGTTCTTGTAACTGGAGAACAAATGCTTTCTCGGCTTTAAATGTTTCCGCAGACGCTGTCAACGAAGACGTAACTAGGATAGAGAGAATTTGGCTATTTACTATTTGCTGGAACGCTTTCTTCTGAGGGTTCAGTTTTTGTCTCCTTCATTTTTCTCTTTCTTTTGAGCTTCGTACGTCTTACAGAACAACATGATTATGCCTATGATCTGATTTCGAATTTGGCTAGAAATTAGGGGGAAAACTGCGAGAAGAGAATTGTTATTTAGTCGTTCAATTTTTTTTTGAGTAATGATTGTCAGAGTTTGTTTTTTAAGTTGATTATTTATGATACCGAGGCGGTTGAAGTCCGTGGAGGATTGATTATTTGTTGTTGTAGCAAAAACTGGTTCGCATGAATTATGAGATGCGGGTTTATTGTGCGCAGGTAGGAGCGCCTCCGGCGATTTCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACATTTGTAACCGTCACGCTGTAACCACGTGCTTAGGCGTCGATCCTGAACTCGATGAATTCATGGTTACTACTTCCTTCTTCTTCTCCATGAACAATCAAAATCTCTCTCTCTCTCTTTCTCAATTTCTCAGTGCTGTTTTCGTTTTGTTAATTTTATGGTTTCTTTTTTGTTCTTAGGAAACGTACTGCGATATGTTGGTGAAGTACAAATCAGATCTCAAGAGGCCCTTCGACGAAGCAACCACGTTCTTGAATAAGATCGAGCTGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCCGGTCAGTATTGTATAATCATTACTTACATTTGATTAATCACTTTCCGTTTCGAATGCTACTGTTTTGTTTGGGTTTATTACGCTTATTAAGATTAATTAATTATATTTTATCGTCGTTGCCTGTGTTGGTCTCGAAGAACGAAGAAAATAATAATAACAACAACAACAATAATAAAAGATTGGTAGATTACTGACCGCTGATTGAGAAACCTAAGATCGTAATAACCGATAACACAAAGGAACAGCAAAACCCTAGGAACTATATTGATCATCGGCCTGTGTCTTTGATTGCAACGCTTATCTACAGTCGCCGTTTTTGGATTACGACCTTGTTAATTGTTCGTTGAATGGTGATTCTTTATTGATTACATTGGAAATCTTCGAGTGCAATAATGAAGCTTCCAAACAGTGTTTTCTAATAATTTAGTGTTTTAATTATTACATTTTGCTTTGGTTTAATTGAAGTTGTTCATCTATCTTGTTTGTTGTGTTTGTTTCTTTTTCCTCGCTTTTCTTATCCTTCTTTTAAAAAAATTCTTTCCGATTTTCATGTTATATGACCAAAAAATATAAAAATGGAATAAAATATCAAAATCAATCCTGAAAGTGTGAACTTTTCTGTGTTTAAGATTCTGATTTTGACATTTCAGAGTTACCTTCGAGATAGGAATATGATTGGGCATATGATATTAATTAATAATGTTTTTCCATATTTATCAACTGGTAGAAAATCCTCTCGTAAGGCTTTCAATTATATATGTATCTCATTTTTTATGGACTCCTCCCTTTAACTAGTTCTTCTATCTCTCTCTCTCTCTATAATTATAGACAAAAGGGTACTTGTTTTTAATTCGTTGGTCCGAAATACAGGTTGCCTCAACCTATCCTGTCTTGTCTTTGAGTTCTTAAATGAGGTGTCTTAGTAAACACACCAATTCATAACCATATTGTTAATGTATTTTATATCCATATATGCTATTCACCTATAATTATTGACTTACTTATATCGTTGTGTAGATGCAACATTATTTTCTGTAATTTTCGATCCCAAATCCTATGGAAAAATTCAAGTTGCTCCTATATATTTTGCCTTTCTGTGTTGCTTAGAGCCTTTAGTATTGAGAATAATTAGTGAATCATGCCGAATATTGCATTAAAATTTCACGAGGAATGACAAAATCATATATTTTTTGTCTTCCAATATTTCAAATAGATATTGAGTTTGAGTTTATATATACTTTAAGTAGTAGATAGGAGGTCAAGAAGCCATTGGTCCTACCCACATATATTTGTTCTAACAATAATTTCTTCAATTGATCACTGTTGTAGATTTTTTTTTTTTGGGGGGGGGGGGGGGGGGAAGTAGTTTGGAATGCCATTAAGGAGATAAAAGATGTGAATAATTCTCACTCTAACAGCTAACATCATTGCATTAGTGTGTTAATCAATGAATGTGTCCGTATTATATGCTGAATCTTTCTTAAGATATATGATAGACATTATCTTAATGTGATTGTGATAGCTGTGATAATGTTTGTCGAAGATATTTTATTATAATGTCAAATTTCAATGGAGCGTGAGTGGTTGATGTAAGATGTGGAAAATTTGAAAATGAACCTTGAGACTTGTCAGGTGCTGCGGACTACTGATAAAGTGAAGTTGAAGCAGTATCTTCTTGAAACTTTATTAGTTCATTTAAGTTCTGAATAATTTCAATCCCCAGGTAGGAGAAACCTCATTATTAAAGAACATCACTGACTTGCTTTGTGTTGTAATGCTCTCTAGTTTCTCTGACATGCAACTTATGAGAATGGGCATGGCAGGCTTTAAAGCTTAAATATGATAATTAAAAAAATGAGTGATCTTAAAAGAAAAGCTTGTAAATCAAAGATAATGGTTGGCAACTATTGTTTTTAATTTACTTTGGAAGTACAAATTAACTTTTCAGGTGTGATGTTATCTTCATTAAAAAAATAGCCTCGTGTTCGACTTGTCTTAGCACGAGAGCTTTAGTGAGTTCTTTATATGCTTTCTCATATATATTCACTTATATAAAAGTCTCTTTGGACATGCGACCGTTGGCAGACTTCCATTTGGATTTCATAGGGCATATATTCACGTGCTCGAACGGTATTTTGCTGCCAAAATCTGGCTGGCTCATTTTTAGCAAGAACTTTGCATCTCGGACAACAAGGATTTGGTCCGATATATTAGGCTTATTTTCTTACTAAATCATTGCACTCTCTTTGGACTTTTAATTTCTAAGGGAATTCCTTTGTATTACGTAGTCGTAATGCTTTTCCATCCTCATCCAGACCATCATTGATAGATAGATTTGTCTTAAGAGAAAGCTAGGTCATAATTTTGATCAACGAAAGTGGGATTTGTTAGCAGAAATTATCCCAGAAAATTGAAACGGTATGACCGGTTGATGGTATTTAATGTCATCATCAACACATTGATTTTTGTTTGGATTTCTACTTCTAGTTCGAGATCCATAAAGGCGATGATCTAGCTGTGATCATCATATAAAATCACTAAGTTTCTTTCTGGACAGTGAGTACTGCATTATTTTGTCTGGAACCACCAGCTAATTAAAGACCACCTTTCTTTGGATGTATAAAAAATTGATGTAATGGCATGAGTAATCATTACATATTGGTTGCATATCTAGCTTACTTGTGATGTTTGTGAGTTGGTTTTTATAGTGTTTTCTGCTGGTTACTGTGAAGCTTCACATAGATAGCAGTAATCGAATTATCTTTTCTCCGAACCCACTATTTGTGTACAGCAGGATTCCTTGCATATGAACTCTAATGTGTCCCAAATTTTATAGACCTGGATCCGAGCCTTTTGATGAAGAAGAATTAGATGGGTCTTTTAAACCTAGGGTCTGTAAGCGCGAGTACTGGTGGGCACATACTTATATCTGCCATTAGGGAAGAACGAAGCTTTTTATTTCTTCCATAGTTATTTTACTTAGTCTGCAGAGAAGGGTTTTAACAGATCCTCAATATAATGGTCACGGCTTGTTTTGCTTGATCACCATTATCATTCAGGAGTAAGAAGCTTGAAAGGACAGCGTGCGGGGTAGAAAATAAGTTCTGGTAATGGCATGTCCCACGATGAATACTGAGAAAGTTAAGAAAGGGACAAAGAAATAAATGGAAAAGTTTAGGGGAAAGCCCGGGTTGAGCGGGTGGTCGAGGTTTCCACACTGTCACATGTACTCCCGCAGTTTTCGCTGCGAAGGTGCTTTTGGTGCCCTCTCTCACCCCACGCAATTGGTCACTCCTAGCTGGTTAGTGGTTGTCACTTCTATCGACATGTACTCTGCCGTGTTCTTTGTGCAGATGACGTGTACGACACGTGTCTCTTTCTTGCTGGGTAGCTGAGATTTACTGTACTCACCCTCACTCGTATCCTTTGCTTTATCTTTTCCCCTTTTGGGTCCCTCTTTTTTCTTTCTTACACTAAGATTGAAGTAGGTGCCTATCACCGACTTTTTACCTTTGTCTGAACAGAATCAGCTAACTAGGCAAGAGATGGGGTTGGATCAGAATAGTTCCTCGCTAACCAGGTGGGATTCTCATGTTCTTGCCAACAAAATAATCACACCCACGTCCGGATTATTATTTTTTTTTTTCTTTCAAACTTCTAAGTGTGACATTTGAAAGTCTTGGTCTGAAAAGGGTGGGCATTTAATTCACTATCAACTAACAACTACCATGTGCTTTGTTCCTGGCTGTGTGACTGGGCATTACCCGGTAGTAAGGATATGGGTAAAGGGTCACTTTCTAGCTAAAGGGAACTGCACCAGGTCGTGTGGTGGGGTCATTGTATTACTGCTCATGGGATTATCATCGAGTGAGGGAGGAGATTTTTAATACAAACCTCGAGACTCTCGTGGGTCATTCCAGAAAGCGAATTTATGTGGCCGTTCAGTCTTGTCTATTCTGACTGTGAGTTCCTCACGCACCCATCCCCCCCGTCTGACAAATGACTTAACCAGACACTGCTGAAACGCACCTTGGCTTCTCTTTTCCTTCTTCCCCTTTTGCAGTTGCCAGTCAAATCCTTGTTTTACCTTTGAATGCCTTTCTCTGTGGGGTCCTCTTCATCATGTCCCGCCCTTTCAATGTCAATCTGCCCTTCTTACTGAGATGTTGAATCTTATTATTATTATTTTTTATTGCATTTGGTTATATACAGTATCTGAATTATTACTGCCAAGTAAGAATATTTTTACTGTAACGTGAATAATAGATGAAGGAGCTGTCTCGTCGGATGAAGAGTTGAGTGGAGGAGAGATGGAAGCTGTGGAGGCGGAGACTCAAACCAAAGGCGAGAAAAGGGATCTCAAGGATAAGCTATTACGCAGATTTGGCAGTCATATTAGTAGCTTAAAATTGGAGTTCTCAAAGAAGAAGAAAAAAGGAAAATTACCAAAAGAAGCCAGGCAAACCCTCCTTGAATGGTGGAATGTTCACTATAAATGGCCATATCCTACGGTATGTTTGCTTATAACCTTTCTTAAATTTTCTTGATGCATTACCACAGTTCATTATGCCATACTCACGTACTATTTCCAACATAAATTTTGTGTGTTAAACTATTAGTTTATCACGCAATTCATGATATTTCTACTTATTAATTGCCATTAGATGTTGGAGTTCAAATTTCCACACAAAATGCTTTTTTTAAACTTAAATAAAGCGGTTTGGATTAAATAATAAATACCCACATCATGGAGAGATATATTCAAATATTGCTTCAAGTTTGAGGGCCATAATCCACTGCTTTTAATCATACAGGAAGCCGATAAGGTTGCACTGGCAGAGAGAACAGGGCTTGACCAGAAGCAAATTAACAATTGGTTCATAAATCAGCGGAAACGCCACTGGAAGCCATCAGAGAATATGCAGTTGGAAGGAGTGGATGAGCTTTCTTCAGGTAGATTCTTCAGAGAGGACTGA

mRNA sequence

ATGGAAGAAATGTACGGTTTGCAATCGACGGCGGAGTATTCTGATAAGGCGTTGATGTCACCGGAGAATCTGATTCTGCCTCCGGATTATCAGAGCCTACTGGTTACTTCTGGAGAGTTTCGCGATCGGATTCCGGTGTTTGGATCCAACGAACTGCTTTCGGCGGCGGCTTCGGTGATTTCGGAAGCTGAAGCAGCGTCGATCACGATGGAAATTCAATGTGAAGAAGATATGGTGAACGTGATCAAAGCTAAAATTTCTTCTCATCCTACTTATCCTCGATTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGAGCGCCTCCGGCGATTTCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACATTTGTAACCGTCACGCTGTAACCACGTGCTTAGGCGTCGATCCTGAACTCGATGAATTCATGGAAACGTACTGCGATATGTTGGTGAAGTACAAATCAGATCTCAAGAGGCCCTTCGACGAAGCAACCACGTTCTTGAATAAGATCGAGCTGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCCGATGAAGGAGCTGTCTCGTCGGATGAAGAGTTGAGTGGAGGAGAGATGGAAGCTGTGGAGGCGGAGACTCAAACCAAAGGCGAGAAAAGGGATCTCAAGGATAAGCTATTACGCAGATTTGGCAGTCATATTAGTAGCTTAAAATTGGAGTTCTCAAAGAAGAAGAAAAAAGGAAAATTACCAAAAGAAGCCAGGCAAACCCTCCTTGAATGGTGGAATGTTCACTATAAATGGCCATATCCTACGGAAGCCGATAAGGTTGCACTGGCAGAGAGAACAGGGCTTGACCAGAAGCAAATTAACAATTGGTTCATAAATCAGCGGAAACGCCACTGGAAGCCATCAGAGAATATGCAGTTGGAAGGAGTGGATGAGCTTTCTTCAGGTAGATTCTTCAGAGAGGACTGA

Coding sequence (CDS)

ATGGAAGAAATGTACGGTTTGCAATCGACGGCGGAGTATTCTGATAAGGCGTTGATGTCACCGGAGAATCTGATTCTGCCTCCGGATTATCAGAGCCTACTGGTTACTTCTGGAGAGTTTCGCGATCGGATTCCGGTGTTTGGATCCAACGAACTGCTTTCGGCGGCGGCTTCGGTGATTTCGGAAGCTGAAGCAGCGTCGATCACGATGGAAATTCAATGTGAAGAAGATATGGTGAACGTGATCAAAGCTAAAATTTCTTCTCATCCTACTTATCCTCGATTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGAGCGCCTCCGGCGATTTCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACATTTGTAACCGTCACGCTGTAACCACGTGCTTAGGCGTCGATCCTGAACTCGATGAATTCATGGAAACGTACTGCGATATGTTGGTGAAGTACAAATCAGATCTCAAGAGGCCCTTCGACGAAGCAACCACGTTCTTGAATAAGATCGAGCTGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCCGATGAAGGAGCTGTCTCGTCGGATGAAGAGTTGAGTGGAGGAGAGATGGAAGCTGTGGAGGCGGAGACTCAAACCAAAGGCGAGAAAAGGGATCTCAAGGATAAGCTATTACGCAGATTTGGCAGTCATATTAGTAGCTTAAAATTGGAGTTCTCAAAGAAGAAGAAAAAAGGAAAATTACCAAAAGAAGCCAGGCAAACCCTCCTTGAATGGTGGAATGTTCACTATAAATGGCCATATCCTACGGAAGCCGATAAGGTTGCACTGGCAGAGAGAACAGGGCTTGACCAGAAGCAAATTAACAATTGGTTCATAAATCAGCGGAAACGCCACTGGAAGCCATCAGAGAATATGCAGTTGGAAGGAGTGGATGAGCTTTCTTCAGGTAGATTCTTCAGAGAGGACTGA

Protein sequence

MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVISEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQLEGVDELSSGRFFRED

Homology

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BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.6e-113
Identity = 216/330 (65.45%), Postives = 260/330 (78.79%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKA--LMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAAS 60
           M+ MY   S  +YSDK+  +MSPE+L+ P DYQ+LL +S        VFGS+ELLS A S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 61  VISEAEAASITMEIQCEEDMVN--VIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLE 120
            +S +EAASI  EI+  +D V+  VIKAKI+ HP+YPRLL AYIDCQKVGAPP I+ LLE
Sbjct: 61  ALS-SEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE 120

Query: 121 GIRQESDICNRHAV-TTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQ 180
            I++ESD+  +  V ++C G DPELDEFMETYCD+LVKYKSDL RPFDEAT FLNKIE+Q
Sbjct: 121 EIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQ 180

Query: 181 LSNLCNGAFS-RSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHIS 240
           L NLC G  S R +S++G +SSDEELSGG+ E  E + + + E RDLKD+LLR+FGS IS
Sbjct: 181 LRNLCTGVESARGVSEDGVISSDEELSGGDHEVAE-DGRQRCEDRDLKDRLLRKFGSRIS 240

Query: 241 SLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFI 300
           +LKLEFSKKKKKGKLP+EARQ LL+WWN+HYKWPYPTE DK+ALA+ TGLDQKQINNWFI
Sbjct: 241 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI 300

Query: 301 NQRKRHWKPSENMQLEGVDELSSGRFFRED 325
           NQRKRHWKPSENM    +D+ SSG FF E+
Sbjct: 301 NQRKRHWKPSENMPFAMMDD-SSGSFFTEE 327

[Close]

BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 366.3 bits (939), Expect = 3.5e-100
Identity = 197/327 (60.24%), Postives = 245/327 (74.92%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           M+ M G +ST +YS+KA      L++P DYQSL+ ++     R+  FGS+EL +A +S  
Sbjct: 1   MDRMCGFRSTEDYSEKA-----TLMMPSDYQSLICSTTGDNQRL--FGSDELATALSS-- 60

Query: 61  SEAEAASITMEIQCEED--MVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGI 120
                  +   I+  ED   ++VIK+KI+SHP YPRLL  YIDCQKVGAP  I+ +LE I
Sbjct: 61  ------ELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEI 120

Query: 121 RQESDICNRH-AVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLS 180
           ++E+ +  R  A  +C G DPELDEFMETYCD+LVKYK+DL RPFDEATTF+NKIE+QL 
Sbjct: 121 QRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQ 180

Query: 181 NLCNG-AFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSL 240
           NLC G A + +LSD+GAVSSDEEL   +  A + ++Q +   RDLKD+LLR+FGSHISSL
Sbjct: 181 NLCTGPASATALSDDGAVSSDEELREDDDIAAD-DSQQRSNDRDLKDQLLRKFGSHISSL 240

Query: 241 KLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQ 300
           KLEFSKKKKKGKLP+EARQ LL+WWNVH KWPYPTE DK++LAE TGLDQKQINNWFINQ
Sbjct: 241 KLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQ 300

Query: 301 RKRHWKPSENMQLEGVDELSSGRFFRE 324
           RKRHWKPSENM  + +D+ S+  FF E
Sbjct: 301 RKRHWKPSENMPFDMMDD-SNETFFTE 310

[Close]

BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.7e-71
Identity = 137/252 (54.37%), Postives = 177/252 (70.24%), Query Frame = 0


Query: 77  DMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAVTTCLGV 136
           D+  ++KA+I+ HP YP LL AYI+C+KVGAPP ++ LL+ I +E            +GV
Sbjct: 38  DLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGV 97

Query: 137 DPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFS-----RSLSDE 196
           DPELDEFME YC +LV+YK +L RPFDEA +FL+ I+ QLSNLC+GA S      + SDE
Sbjct: 98  DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDE 157

Query: 197 GAVSSDEELSGGEMEAVE--AETQTKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKL 256
              SSDE+   GE + ++   E  ++    +LK+ LL+++   +S L+ EF KK+KKGKL
Sbjct: 158 MVGSSDEDQCSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKL 217

Query: 257 PKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQ- 316
           PK+AR  LLEWWN HY+WPYPTE DK+ LA RTGLD KQINNWFINQRKRHWKPS+ M+ 
Sbjct: 218 PKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRF 277

Query: 317 --LEGVDELSSG 319
             +EGV   SSG
Sbjct: 278 ALMEGVAGGSSG 289

[Close]

BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot
Match: Q41330 (Homeotic protein knotted-1 OS=Solanum lycopersicum OX=4081 GN=KN1 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.2e-69
Identity = 137/245 (55.92%), Postives = 174/245 (71.02%), Query Frame = 0


Query: 77  DMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAVT-TCLG 136
           +++  +KAKI +HP    LLDAY+DCQKVGAPP ++  L  +RQE +   R ++T   + 
Sbjct: 89  EVIEALKAKIIAHPQCSNLLDAYMDCQKVGAPPEVAARLSAVRQEFEARQRRSLTDRDVS 148

Query: 137 VDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNG---AFSRSLSDEG 196
            DPELD+FME Y DMLVKY+ +L RP  EA  F+ KIE QL+ L N     F+     EG
Sbjct: 149 KDPELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGNAPVRIFNSEDKCEG 208

Query: 197 AVSS--DEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKLP 256
             SS  D++ SGGE E  E +   + E R+LK+ LLR++  ++SSLK E SKKKKKGKLP
Sbjct: 209 VGSSEEDQDNSGGETELPEID--PRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLP 268

Query: 257 KEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQLE 316
           K+ARQ L+ WW +HYKWPYP+E++KVALAE TGLDQKQINNWFINQRKRHWKPSE+MQ  
Sbjct: 269 KDARQKLITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFM 328

[Close]

BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot
Match: P46639 (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.0e-67
Identity = 135/246 (54.88%), Postives = 168/246 (68.29%), Query Frame = 0


Query: 79  VNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAV--TTCLGV 138
           V  +KAKI +HP Y  LL AY+DCQK+GAPP +   +   RQ+ +   + +    +    
Sbjct: 131 VEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR 190

Query: 139 DPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSDEGAV-- 198
           DPELD+FME YCDMLVKY+ +L RP  EA  F+ +IE QLS LC        + +G    
Sbjct: 191 DPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDN 250

Query: 199 --SSDEEL---SGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKL 258
             SSDEE    SGGE E  E +   + E R+LK+ LL+++  ++SSLK E SKKKKKGKL
Sbjct: 251 MGSSDEEQENNSGGETELPEID--PRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 310

Query: 259 PKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQL 316
           PKEARQ LL WW +HYKWPYP+E++KVALAE TGLDQKQINNWFINQRKRHWKPSE+MQ 
Sbjct: 311 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 370

[Close]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL
Match: A0A6J1FZF4 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111449314 PE=3 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 6.5e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI
Sbjct: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60

Query: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120
           SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ
Sbjct: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120

Query: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180
           ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC
Sbjct: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180

Query: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240
           NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF
Sbjct: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240

Query: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300
           SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH
Sbjct: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300

Query: 301 WKPSENMQLEGVDELSSGRFFRED 325
           WKPSENMQLEGVDELSSGRFFRED
Sbjct: 301 WKPSENMQLEGVDELSSGRFFRED 324

[Close]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL
Match: A0A6J1HQ39 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111466351 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.1e-180
Identity = 320/324 (98.77%), Postives = 322/324 (99.38%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI
Sbjct: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60

Query: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120
           SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ
Sbjct: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120

Query: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180
           ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC
Sbjct: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180

Query: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240
           NGAFSRSLSDEGA SSDEELSGGEMEAVEAE QTKGEKRDLKDKLLRRFGSHISSLKLEF
Sbjct: 181 NGAFSRSLSDEGAASSDEELSGGEMEAVEAEAQTKGEKRDLKDKLLRRFGSHISSLKLEF 240

Query: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300
           SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH
Sbjct: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300

Query: 301 WKPSENMQLEGVDELSSGRFFRED 325
           WKPSE+MQLEG+DELSSGRFFRED
Sbjct: 301 WKPSESMQLEGMDELSSGRFFRED 324

[Close]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL
Match: A0A0A0KVK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600390 PE=3 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.1e-172
Identity = 306/324 (94.44%), Postives = 314/324 (96.91%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           MEEMYGLQS+AEYSDKALMSPENLILPPDYQSLLV+SGEFRDRIPVFGSNELLSAAAS I
Sbjct: 1   MEEMYGLQSSAEYSDKALMSPENLILPPDYQSLLVSSGEFRDRIPVFGSNELLSAAASAI 60

Query: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120
           SEAEAASIT +IQ EEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPP I+HLLEGIRQ
Sbjct: 61  SEAEAASITPDIQREEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPEIAHLLEGIRQ 120

Query: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180
           ESD+CNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC
Sbjct: 121 ESDLCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180

Query: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240
           NGAFSRSLSD+GAVSSDEELSGGEME VEAE QTKGE RDLKDKLLRRFGSHIS+LKLEF
Sbjct: 181 NGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRDLKDKLLRRFGSHISTLKLEF 240

Query: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300
           SKKKKKGKLPKEARQTL EWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH
Sbjct: 241 SKKKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300

Query: 301 WKPSENMQLEGVDELSSGRFFRED 325
           WKPSENMQ EG+D LSSGRFFRED
Sbjct: 301 WKPSENMQFEGMDGLSSGRFFRED 324

[Close]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL
Match: A0A5D3CW74 (Homeobox protein knotted-1-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001170 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.8e-171
Identity = 305/325 (93.85%), Postives = 313/325 (96.31%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           M+EMYGLQSTAEYSDKALMSPENLI+PPDYQSLLV+SGEFRDRIPVFGSNELLSAAAS I
Sbjct: 1   MDEMYGLQSTAEYSDKALMSPENLIIPPDYQSLLVSSGEFRDRIPVFGSNELLSAAASAI 60

Query: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120
           SEAEAASIT +IQ EEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPP I+HLLEGIRQ
Sbjct: 61  SEAEAASITPDIQREEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPEIAHLLEGIRQ 120

Query: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180
           ESD CNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC
Sbjct: 121 ESDFCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180

Query: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240
           NGAFSRSLSD+GAVSSDEELSGGEME VEAE QTKGE RDLKDKLLRRFGSHIS+LKLEF
Sbjct: 181 NGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRDLKDKLLRRFGSHISTLKLEF 240

Query: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300
           SKKKKKGKLPKEARQTL EWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH
Sbjct: 241 SKKKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300

Query: 301 WKPSENMQLEGVDE-LSSGRFFRED 325
           WKPSENMQ EG+D  LSSGRFFRED
Sbjct: 301 WKPSENMQFEGMDNGLSSGRFFRED 325

[Close]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL
Match: A0A1S3BFA4 (homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103488991 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.8e-171
Identity = 305/325 (93.85%), Postives = 313/325 (96.31%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           M+EMYGLQSTAEYSDKALMSPENLI+PPDYQSLLV+SGEFRDRIPVFGSNELLSAAAS I
Sbjct: 1   MDEMYGLQSTAEYSDKALMSPENLIIPPDYQSLLVSSGEFRDRIPVFGSNELLSAAASAI 60

Query: 61  SEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQ 120
           SEAEAASIT +IQ EEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPP I+HLLEGIRQ
Sbjct: 61  SEAEAASITPDIQREEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPEIAHLLEGIRQ 120

Query: 121 ESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180
           ESD CNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC
Sbjct: 121 ESDFCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLC 180

Query: 181 NGAFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEF 240
           NGAFSRSLSD+GAVSSDEELSGGEME VEAE QTKGE RDLKDKLLRRFGSHIS+LKLEF
Sbjct: 181 NGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRDLKDKLLRRFGSHISTLKLEF 240

Query: 241 SKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300
           SKKKKKGKLPKEARQTL EWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH
Sbjct: 241 SKKKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRH 300

Query: 301 WKPSENMQLEGVDE-LSSGRFFRED 325
           WKPSENMQ EG+D  LSSGRFFRED
Sbjct: 301 WKPSENMQFEGMDNGLSSGRFFRED 325

[Close]

BLAST of CmoCh18G007890 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-114
Identity = 216/330 (65.45%), Postives = 260/330 (78.79%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKA--LMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAAS 60
           M+ MY   S  +YSDK+  +MSPE+L+ P DYQ+LL +S        VFGS+ELLS A S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 61  VISEAEAASITMEIQCEEDMVN--VIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLE 120
            +S +EAASI  EI+  +D V+  VIKAKI+ HP+YPRLL AYIDCQKVGAPP I+ LLE
Sbjct: 61  ALS-SEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE 120

Query: 121 GIRQESDICNRHAV-TTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQ 180
            I++ESD+  +  V ++C G DPELDEFMETYCD+LVKYKSDL RPFDEAT FLNKIE+Q
Sbjct: 121 EIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQ 180

Query: 181 LSNLCNGAFS-RSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHIS 240
           L NLC G  S R +S++G +SSDEELSGG+ E  E + + + E RDLKD+LLR+FGS IS
Sbjct: 181 LRNLCTGVESARGVSEDGVISSDEELSGGDHEVAE-DGRQRCEDRDLKDRLLRKFGSRIS 240

Query: 241 SLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFI 300
           +LKLEFSKKKKKGKLP+EARQ LL+WWN+HYKWPYPTE DK+ALA+ TGLDQKQINNWFI
Sbjct: 241 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI 300

Query: 301 NQRKRHWKPSENMQLEGVDELSSGRFFRED 325
           NQRKRHWKPSENM    +D+ SSG FF E+
Sbjct: 301 NQRKRHWKPSENMPFAMMDD-SSGSFFTEE 327

[Close]

BLAST of CmoCh18G007890 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 405.6 bits (1041), Expect = 3.7e-113
Identity = 216/332 (65.06%), Postives = 260/332 (78.31%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKA--LMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAAS 60
           M+ MY   S  +YSDK+  +MSPE+L+ P DYQ+LL +S        VFGS+ELLS A S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 61  VISEAEAASITMEIQCEEDMVN--VIKAKISSHPTYPRLLDAYIDCQK--VGAPPAISHL 120
            +S +EAASI  EI+  +D V+  VIKAKI+ HP+YPRLL AYIDCQK  VGAPP I+ L
Sbjct: 61  ALS-SEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACL 120

Query: 121 LEGIRQESDICNRHAV-TTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIE 180
           LE I++ESD+  +  V ++C G DPELDEFMETYCD+LVKYKSDL RPFDEAT FLNKIE
Sbjct: 121 LEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIE 180

Query: 181 LQLSNLCNGAFS-RSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSH 240
           +QL NLC G  S R +S++G +SSDEELSGG+ E  E + + + E RDLKD+LLR+FGS 
Sbjct: 181 MQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAE-DGRQRCEDRDLKDRLLRKFGSR 240

Query: 241 ISSLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNW 300
           IS+LKLEFSKKKKKGKLP+EARQ LL+WWN+HYKWPYPTE DK+ALA+ TGLDQKQINNW
Sbjct: 241 ISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNW 300

Query: 301 FINQRKRHWKPSENMQLEGVDELSSGRFFRED 325
           FINQRKRHWKPSENM    +D+ SSG FF E+
Sbjct: 301 FINQRKRHWKPSENMPFAMMDD-SSGSFFTEE 329

[Close]

BLAST of CmoCh18G007890 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 366.3 bits (939), Expect = 2.5e-101
Identity = 197/327 (60.24%), Postives = 245/327 (74.92%), Query Frame = 0


Query: 1   MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVTSGEFRDRIPVFGSNELLSAAASVI 60
           M+ M G +ST +YS+KA      L++P DYQSL+ ++     R+  FGS+EL +A +S  
Sbjct: 1   MDRMCGFRSTEDYSEKA-----TLMMPSDYQSLICSTTGDNQRL--FGSDELATALSS-- 60

Query: 61  SEAEAASITMEIQCEED--MVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGI 120
                  +   I+  ED   ++VIK+KI+SHP YPRLL  YIDCQKVGAP  I+ +LE I
Sbjct: 61  ------ELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEI 120

Query: 121 RQESDICNRH-AVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLS 180
           ++E+ +  R  A  +C G DPELDEFMETYCD+LVKYK+DL RPFDEATTF+NKIE+QL 
Sbjct: 121 QRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQ 180

Query: 181 NLCNG-AFSRSLSDEGAVSSDEELSGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSL 240
           NLC G A + +LSD+GAVSSDEEL   +  A + ++Q +   RDLKD+LLR+FGSHISSL
Sbjct: 181 NLCTGPASATALSDDGAVSSDEELREDDDIAAD-DSQQRSNDRDLKDQLLRKFGSHISSL 240

Query: 241 KLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQ 300
           KLEFSKKKKKGKLP+EARQ LL+WWNVH KWPYPTE DK++LAE TGLDQKQINNWFINQ
Sbjct: 241 KLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQ 300

Query: 301 RKRHWKPSENMQLEGVDELSSGRFFRE 324
           RKRHWKPSENM  + +D+ S+  FF E
Sbjct: 301 RKRHWKPSENMPFDMMDD-SNETFFTE 310

[Close]

BLAST of CmoCh18G007890 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 258.5 bits (659), Expect = 7.4e-69
Identity = 135/246 (54.88%), Postives = 168/246 (68.29%), Query Frame = 0


Query: 79  VNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAV--TTCLGV 138
           V  +KAKI +HP Y  LL AY+DCQK+GAPP +   +   RQ+ +   + +    +    
Sbjct: 131 VEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR 190

Query: 139 DPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSDEGAV-- 198
           DPELD+FME YCDMLVKY+ +L RP  EA  F+ +IE QLS LC        + +G    
Sbjct: 191 DPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDN 250

Query: 199 --SSDEEL---SGGEMEAVEAETQTKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKL 258
             SSDEE    SGGE E  E +   + E R+LK+ LL+++  ++SSLK E SKKKKKGKL
Sbjct: 251 MGSSDEEQENNSGGETELPEID--PRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 310

Query: 259 PKEARQTLLEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQL 316
           PKEARQ LL WW +HYKWPYP+E++KVALAE TGLDQKQINNWFINQRKRHWKPSE+MQ 
Sbjct: 311 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 370

[Close]

BLAST of CmoCh18G007890 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 252.3 bits (643), Expect = 5.3e-67
Identity = 128/247 (51.82%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 82  IKAKISSHPTYPRLLDAYIDCQKVGAPP-AISHLLEGIRQESDICNRHAVTTCLGVDPEL 141
           +KAKI +HP Y RLL AY++CQKVGAPP  ++ L E     +        T CLG DP L
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGL 180

Query: 142 DEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSDEGAVSSDEEL 201
           D+FME YC+MLVKY+ +L +PF EA  FL ++E Q  +L   + S S S  G  + D   
Sbjct: 181 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPS-SFSGYGETAIDRNN 240

Query: 202 SGGEMEAVEAETQ---TKGEKRDLKDKLLRRFGSHISSLKLEFSKKKKKGKLPKEARQTL 261
           +G   E V+   +    + E R+LK +LLR++  ++ SLK EF KK+KKGKLPKEARQ L
Sbjct: 241 NGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 300

Query: 262 LEWWNVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQLEGVDELSS 321
           L+WW+ HYKWPYP+E  K+ALAE TGLDQKQINNWFINQRKRHWKPSE+MQ   +D    
Sbjct: 301 LDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP 360

Query: 322 GRFFRED 325
             +F ++
Sbjct: 361 HHYFMDN 366

The following BLAST results are available for this feature:

BLAST of CmoCh18G007890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	1.6e-113	65.45	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	3.5e-100	60.24	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q9FP29	7.7e-71	54.37	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
Q41330	3.2e-69	55.92	Homeotic protein knotted-1 OS=Solanum lycopersicum OX=4081 GN=KN1 PE=2 SV=1	[more]
P46639	1.0e-67	54.88	Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 ...	[more]

BLAST of CmoCh18G007890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZF4	6.5e-182	100.00	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111449314 ...	[more]
A0A6J1HQ39	6.1e-180	98.77	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111466351 PE...	[more]
A0A0A0KVK5	2.1e-172	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600390 PE=3 SV=1	[more]
A0A5D3CW74	6.8e-171	93.85	Homeobox protein knotted-1-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BFA4	6.8e-171	93.85	homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103488991 PE=3 S...	[more]

BLAST of CmoCh18G007890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	1.2e-114	65.45	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	3.7e-113	65.06	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	2.5e-101	60.24	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT4G08150.1	7.4e-69	54.88	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G62360.1	5.3e-67	51.82	KNOX/ELK homeobox transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 130..181 e-value: 8.9E-27 score: 105.0
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 134..180 e-value: 1.2E-24 score: 85.6
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 220..241 e-value: 5.1E-5 score: 32.7
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 220..241 e-value: 1.4E-7 score: 31.4
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 220..240 score: 9.480852
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 80..124 e-value: 4.7E-18 score: 76.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 82..123 e-value: 5.2E-19 score: 67.7
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 242..307 e-value: 5.1E-13 score: 59.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 240..303 score: 12.875687
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 252..304 e-value: 7.54522E-13 score: 60.72
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 260..299 e-value: 1.4E-17 score: 63.3
None	No IPR available	GENE3D	1.10.10.60		coord: 238..312 e-value: 1.1E-27 score: 97.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..217
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 1..310
None	No IPR available	PANTHER	PTHR11850:SF287	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6	coord: 1..310
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 278..301
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 241..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G007890.1	CmoCh18G007890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding