CmoCh18G003660 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G003660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein yippee-like
Location	Cmo_Chr18: 2391497 .. 2395031 (-)
RNA-Seq Expression	CmoCh18G003660
Synteny	CmoCh18G003660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAACGGCTACTGACATTTGGCAAACCGAGCAGGCAGGGCGATGTTTTGGAGTTCGAAACTGGTGGATGAAAGGGGGAAGGAATAATTGAGTATGAGATTGTGAGAGGTTAGGTCTTGAATTTGGGATTTTAGGGTTTAAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAACGTTGCTCTTGCCGATGACATCCTCTCTCGGGTACTTTCACTCTATATCTAATCCGTTTTATATGCTCTCCGAATCCTCGATCTTGTTTCTGATTCCTCAGCGATTAATTTCGCCATGCGATGCTAGAATTTTGTTTGTTGAGATTGTGGAATTGGATTTCTGAACAAATTGGAGTGAAATCGGGAGTTTATTTAGTCCTTGAATTGTAGTTTTGCATGAAGATGGATTGTTTTGGCTTGTATAATCGTTATGCTTTCTTTTTGTGTAATAGGTTGCTGGTTTAATTGCTCCAGTGATATCTATTTTCGAAGTTATTATATACCGGTTAATCATTGTGTTGATTATTATCATCATATCGTGCATGTATTTCGCTCTTTTTTTGCATATTTAATCGGCCATGAAGTTAATATTGTTCAATTTTGATGAATTTTTATTGTTCTATTATTGTCCCAGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGTGTGTAAGTTGCATTGTTGTTATTTAAAATTTTTCGTTTCGAGCTTCAAATCCAAATGTCTAGATTGTTGTTATTTTAAATTTGCATTGTACAATTGTTAGTTATCCTCAATTTTTTTCTTATTCCTCCTCATTGGCATTTCTGTTCTACAGATTGAGATGAAATGACCTTATTTTGATCTGTTTCTGATCTCGCATCTAGATTTTACATGAATTGAAATACTTTTACCTTTTTCCAGAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAAGCTTTCTTCTCTGACTATCTATGCAATAGAACTGAAAACTGTTCAATAGGAATCATGATGAACTGGCTGAACGGTCAAAGGAGCTTGTTATAACTTGTATATTTCAGTGTGTGGTTCTGTTATCAGCTACCTATCCTTTGCACATTTCAACTTTCGAACCTATAATATGAAGATAATCTCCTGAAACTAGTTCAGGTGAGCAAAAGTTTGTTTGATGCCCTCAAGTATCAAATGCATCATCAGTAGTAATGATCTATTAAGAGTGGACATGGATTCTATGAGACCCTCAATATTGCATACATATGTTAGAAGGTGCAAAGAAAGTAATTCACAGGTCCAGCAGTTAGTTGTCGTGGGAATTTAAATAGTTTTTGTGTTTTGAGTGGGTTATGTTATGTTTTGAGTTGTTAGCCTGTGAGCTACAATTTTCCATGACGCGGGTCTTCAGACACGGGTTATGCTGTGGTGGGAATTTAAAGTACCCAACCAGACATGGGTCTTCTTCCATGGTTGTCACGTTTTTGCCCAGAGTACGTGGACACAGAGGAGAAGATGGTTCAAAAGCTCATATTAGGGCTCAGACTTCAGATATAGGGCACCGTGGGGGCTATTGCACCTGCCACTTTTGCAGCAGCTCTCCATGCAGCCACCATGATGGATGCTCAATTGCAGAAAGCATGTAGAAAATCTGGGGATCAGAGGAATTTTCAGGGTAAGAGAGAATGGAATGAGCGGTCAGACAGATCATTGCGGTACGGGAGTAAAAGTCGATCGCATAGGCCACCTCCAGCAGAGAGATATTAGGGCGTTAGAATTGAGGCCCCCAGCGCAGAGAGACCTATTTGCCTCACTTGCGGTACTCGTCATTCGGGGGAGTGTAGGACAGGCACTGACGCGTGCTTCCACTACGACAAGAGTGATCACAGGAAGGTTGATTGCCCTCACAGGAGACGCTAGGATGAGAACATAGTATCTGGATCAGGGCAAGGTAGCCAAGGGGGCATGGCGCAATATCTACTAGCAGTTTACTTTATTGTTACAAATGGTATCACAGCCAGACACCGAGTGGTGTGCCAGCAAAGACGCTGGCCCCTAAGGGGAGTGGATTGTGAGATCCCACATTGCTTGGAGAGGGAACGAAGTATTCCTTATAAGTGTGTAAAAACCTCTTCCTTGTAGACGCGTTTTAAAACCTTGAGTGAAAGCCCAAAAGGGAAAACCCATAAAGGACAATATCTGTTAGCAGTGGGCTTGAGCTATTACAATATAGGAATAAACTGAGTTTAATTTTAACATAGGAAAGATAGCTAAATGTAGGAGGGTGAAGTGGTTATCTTGTGAAAATAGCAGAGGTGCACAAGCTAGTTTGGACACTCACGTACAATAAAAAATATGCTTGAAATCCTGAAACTACATTAAACTAGAGGTGATAATAGTGTAATTTATGTATTGTGTCTAAAATCATTTGATGGTTTGTGCGTTTATATGAAAAGTTTTTCTCTAAAATTTTGTTGATTTGCAGTCTTAGATTTGTTTAACTGATGTTGCTGCACTTAGGTAACTACACACGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGGTAGTCGGACATTTTCATTCTTTCAACTTTCCAAATAACATAAGGTTTGCTATAAATGTGGTATTAGTCCTGGGTTTATTCATTCCTTTGACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTGCCATATTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGCTTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAACCCCTTTTTACATGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTAAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCGTAACAGTTTTACGTGAACTCGTATTAGTTCGGTCTGAACTTATTCATGTCTTCTGTGAAGTTGATGGGAAGAAAAGGAAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTTTTGATTATGTGGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGTTCGTGATTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAATAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGTGGCGTATTGCTTGCTGCTGTTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGTGAGGCGGGCTCATTTAAAATGTTATGAATTAGTAAAAGGGGGAATGAATGATCAAATATGAATTATGATATGAATGAATGAAT

mRNA sequence

AGGAAACGGCTACTGACATTTGGCAAACCGAGCAGGCAGGGCGATGTTTTGGAGTTCGAAACTGGTGGATGAAAGGGGGAAGGAATAATTGAGTATGAGATTGTGAGAGGTTAGGTCTTGAATTTGGGATTTTAGGGTTTAAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAACGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGTGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTGCCATATTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGCTTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAACCCCTTTTTACATGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTAAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCGTAACAGTTTTACGTGAACTCGTATTAGTTCGGTCTGAACTTATTCATGTCTTCTGTGAAGTTGATGGGAAGAAAAGGAAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTTTTGATTATGTGGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGTTCGTGATTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAATAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGTGGCGTATTGCTTGCTGCTGTTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGTGAGGCGGGCTCATTTAAAATGTTATGAATTAGTAAAAGGGGGAATGAATGATCAAATATGAATTATGATATGAATGAATGAAT

Coding sequence (CDS)

ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAACGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGTGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAG

Protein sequence

MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSDMDNP

Homology

[Close]

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-43
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAY 119
           LSGMHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVLER RIV+E+  DL+ E Y
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEI--DLSTEVY 116

[Close]

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35
Identity = 62/105 (59.05%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F++ LEG+ YSC++C  ++AL+++I+S++F+C  G+A+LF+ VVNVTSG  E R+M
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMHTV DIFC CCG ++GWKY T H+K QKYKEGK VLER++I
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKI 105

[Close]

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 4.6e-35
Identity = 61/106 (57.55%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-33
Identity = 60/105 (57.14%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+FLV LEG+SYSC++C  N+AL DD++S++F    G+A+LF+ VVNV +G KE+R+M
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-31
Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVF+V+LEG  Y C+ C  +++   DI+S++F C  GRA+LFN+VVNV+ G KE+R+M
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VLE ++I
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI 105

[Close]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL
Match: A0A6J1K1C3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS
Sbjct: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120

Query: 121 SSDMDNP 128
           SSDMDNP
Sbjct: 121 SSDMDNP 127

[Close]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL
Match: A0A6J1GSW9 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS
Sbjct: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120

Query: 121 SSDMDNP 128
           SSDMDNP
Sbjct: 121 SSDMDNP 127

[Close]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 114/127 (89.76%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P 
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 114/127 (89.76%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P 
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.1e-63
Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN +A+P 
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. NCBI nr
Match: XP_022955197.1 (protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955199.1 protein yippee-like At5g53940 isoform X2 [Cucurbita moschata] >XP_022994493.1 protein yippee-like At5g53940 isoform X1 [Cucurbita maxima] >XP_022994495.1 protein yippee-like At5g53940 isoform X2 [Cucurbita maxima] >XP_023543017.1 protein yippee-like At5g53940 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543018.1 protein yippee-like At5g53940 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573285.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012450.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 2.7e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS
Sbjct: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120

Query: 121 SSDMDNP 128
           SSDMDNP
Sbjct: 121 SSDMDNP 127

[Close]

BLAST of CmoCh18G003660 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64
Identity = 114/127 (89.76%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P 
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia])

HSP 1 Score: 250.4 bits (638), Expect = 8.5e-63
Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN +A+P 
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. NCBI nr
Match: XP_004146613.1 (protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypothetical protein Csa_013910 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P 
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. NCBI nr
Match: XP_008442812.1 (PREDICTED: protein yippee-like At5g53940 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 111/127 (87.40%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+FLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLM
Sbjct: 1   MGRIFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPS 120
           LSGMH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P 
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMDNP 128
           SSDM+NP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CmoCh18G003660 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-44
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAY 119
           LSGMHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVLER RIV+E+  DL+ E Y
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEI--DLSTEVY 116

[Close]

BLAST of CmoCh18G003660 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-36
Identity = 61/106 (57.55%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmoCh18G003660 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-36
Identity = 61/106 (57.55%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmoCh18G003660 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 145.2 bits (365), Expect = 3.6e-35
Identity = 61/105 (58.10%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G HTV DIFC  CG ++GWKY T H+K QKYKEGK VLER++I
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKI 105

[Close]

BLAST of CmoCh18G003660 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-34
Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLM 60
           MGR+F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  LSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERW 104
           ++G HTV DIFC  CG ++GWKY T H+K QKYKEGK VLER+
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERF 103

The following BLAST results are available for this feature:

BLAST of CmoCh18G003660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN32	3.5e-43	66.10	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]
P59234	1.2e-35	59.05	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9SR97	4.6e-35	57.55	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9C777	4.3e-33	57.14	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9LY56	4.0e-31	55.24	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]

BLAST of CmoCh18G003660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1C3	1.3e-69	100.00	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1	[more]
A0A6J1GSW9	1.3e-69	100.00	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1	[more]
A0A6J1KNK6	1.3e-64	89.76	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1	[more]
A0A6J1EGK2	1.3e-64	89.76	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1	[more]
A0A6J1CHK2	4.1e-63	88.19	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1	[more]

BLAST of CmoCh18G003660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955197.1	2.7e-69	100.00	protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 pr...	[more]
XP_022927222.1	2.6e-64	89.76	protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippe...	[more]
XP_022140248.1	8.5e-63	88.19	protein yippee-like At5g53940 [Momordica charantia]	[more]
XP_004146613.1	1.9e-62	88.19	protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypotheti...	[more]
XP_008442812.1	2.5e-62	87.40	PREDICTED: protein yippee-like At5g53940 [Cucumis melo]	[more]

BLAST of CmoCh18G003660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53940.1	2.5e-44	66.10	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	3.2e-36	57.55	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	3.2e-36	57.55	Yippee family putative zinc-binding protein	[more]
AT2G40110.1	3.6e-35	58.10	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	2.3e-34	58.25	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 14..105 e-value: 1.3E-12 score: 47.9
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..120
None	No IPR available	PANTHER	PTHR13848:SF74	PROTEIN YIPPEE-LIKE	coord: 1..120
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..109 score: 46.969284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G003660.1	CmoCh18G003660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding