
CmoCh18G003450 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCAACCATCCATCTTCTTCAACTGTTCCCCACCACTCATCTGTGATTATTGCAAGAAAAATCTTCTCCACCACCGCCACTAACAAGATGAAGAGCGCCACAAATGCAGAATCCAGAAGCCGAGTAAGATCGTAAACCTGTAGATTCTCTAATTTCTTCACGAACATGGCTTGTGGCGTTGTTTCCATGACGATCGTACCTCTAAGTTCAAGTTCAAGTTACAGCTCCTGCTTATCGTATGTTCGGAAGCGTCCTTTGCTCCGTAGTCTTTCCGTTGGAGTTCACTGCTCAAGTATTAGCCGAGATTTGTCTCTAACCACCGGTAATATTATCGATTCCTCTGTTTTCTTCTCTTGTTCTTCAACTGTTCTATGAATTCATGGTGCAAGAGTTTGAAGAATGTATGTATTTCAATGGCTTATGATTGCTTGTTAGTTAACATGGCCTTGGATAACTTGTGGCAGAGAGGCTAGGAAATGGTGATGCTATGACTGGAGGAGCTTTTGATTTTTATAAAGCAACTACATCTCTTACTGAAAGGTCGATCTCCACATCAAAGAAGGTCACTCTTGTAAGGCATGGTCTTAGCACTTGGAATGAAGAAAGTAGAGTTCAGGTTTGTAGTGTTCCTACTTTAATCATTGATCTTTTCGACATTGGGGCGTAATGTAGAATACTTGCTCGATTACTCGATTACTCAATACCGGTTTCCATGTGCTTGTCATGTATGTTTGGTTTATGAAATCATATACATGGATGAATCTGTAACCGGTCAAGCCCACGGCTGGTAGATATTGTCCCTAAATGAACTATGGATGATGAAAATTTGAGATTTCTATTTCTGAGGAGACGGTCAAGATTTGAACAACTTTGAACTTGAATGTACAGATTCCATTCTTCTTAGTACATGGATTTAATTTTACATTTAGCCTAATTTTTGTTGAACTAACATGCAGGGAAGCTCGGACTTATCTCTCTTAACAGAAACTGGAGTGCTGCAAGCAGAAAAATGTAGAAGAGCCTTGGCAAACATAAATTTTGATAGATGTTTTGCAAGTCCAATATCACGCGCCAAGGTTGGGTGGCATCCAAATCTCTGTGTGTGTTGTTGAGTATTATTGAAAGCAGTAGTCCCACATTGGCTAATTAAGAGGATGATCATGGGTTTACGAGTAAGGAATACTCTCTTTTTTGGGGAGACCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAATCGTGGTTCCCAACATGGGATCAGAGCCATACCCTTAACTTAGTCATATCAATAGAATACTCGAATGTTGAACAAAAAAGTTGTGAACCTCAAAGGTGTAGTCAAAAGTGACTCACGTATCGAACAAACGGTGTACTTTGTTCAATAGCTTCAGAGAAAGGAGTCAAGCCTCTATTAAGAGGAGGCTGTTCGAGGCTCCATAGGCTTCAGGGAAGGCTCTATGGTGTACTTTGTTCGAAAAGAGGATTGTTGAGAATTATTGAAAGGAGTAGTCAAACATTGGCTAATTACCAATTAAGATGGATGATCATTAGTTTATAAGTACTGAATACTATCTTCATTGGTATGAGGCTTTTTGGAGAAACCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTAAACAATATTATACCATTGTAGAGAGTCGTGATTCCTAAGACGTGTATTCTTTTCTTTTTTCATTATGATATATTGTTTGATTAAATTGCCACTATTTCCTTGAGTGCAGTCAACTGCTGAAGTTTTATGGCAAGGAAGGGAAGAAGAACTGGTTTTTCTTGATTCTCTGAAGGAAGCCCATCTGTTTTTTCTTGAAGGCATGAAAAATGGTCTGTCCCCTGCTTGAGCATACTACAATTTTGATTGCCATTTTACTATGTTATCATGAAGAACATCATGTTTGGAAGTAACTCAAAGTTGAATGTCGCATCAGTTCATATCATGTTTGGAAGTAACTCAAAGTTGAATGTCTCATCAGTTCATATCATGTTTGGAAGTAACTCAAAGTTGAATGTCTCATCAGTTCATATCATGTTTGGAAGTAACTCAAAGTTGAATGTCGCATTAGTTCATATTATATTTGGAAGTAACTCAAAGTTGAATGTAGCATCAGTTCATACATTTAAACAAGCTAAACAGCATCATCCACAAATTCCATTGAAAACGTTTTTGGCGACTGCTCTTTTTTAAATTCTAGGAGATGAACATTTTTTTTCTTTTTGGAACTGGTTTATCTCTTGATTTCTGCATTTGAGATTTGAGACTTGAGACTTCCTTGTAGATCTTAAAATATTGCTTAGAATACGTCCCTCTGTACATTCTGTTTCGATCATAGAAATCATGATTAGAATTTGGAGGCAGTGGATGCTAAGAAGATTTATCCAAAGGAGTACACAACATGGCGAGAAGATCCTGCTAAATTTTGCGTAAATGGCGTCTACCCTCTTCGAAAAATTTGGGTAACAGCAAGAGAAGCTTGGAGGGAAATCTTGTTATCACCTGTGAGATATGTTCATTCAATCTATTCCCATCAATTAGAAGCTTGTCTGGCTGCTTTTTAACTTGTGTTTTGTTGACTATCAGGGAGAGAATTTTGTGGTGGTCACTCACAAATCTATATTGCGGGCACTCATCTGCACAGCCTTGGGGCTTGGCCCTGAGAGGTATGAACATTGTCATGAATATCCTTGTGGACCAAAATGAATTTAGGATTCCTTGTAACAAGTAATCTTCGTTGTTATATATTTAACGCCTTCAAATTCCAAAATGTTGAATAAGTTTGTGTGTTGATGGCTTTCGTGGTTTAGGTTCCGATCGGTCGAGATAAACAATGGCGGGATATCGGTATTCAAGTTCAACGAGAAAGGAGAGGCAATGCTTCAATCTTTGAATATGACAGCACACATGTACAGCGATCACACCTATTTATACTAAAACTAGGAAGTTTGTAGAAATTAGGAGAATGATACTGTATTGTTTTCTTTCTTTTTTTTTTATAAAGATGATAATTTGCATAATGAATCTCAGGCTTGTTTTGTGAGCAATATTGGCCTTTATTTAAATTATTGTGCGGAGCTCTTAGATGTTCGTGAGAGTGTCTTCATTGGTTTAGTGCCCTCTCGTGCTTGGCCAAAAGTACTCTTTTACTTCCATCATTTTTGTCCATCTAGACGTTTCA ATGATCCAACCATCCATCTTCTTCAACTGTTCCCCACCACTCATCTGTGATTATTGCAAGAAAAATCTTCTCCACCACCGCCACTAACAAGATGAAGAGCGCCACAAATGCAGAATCCAGAAGCCGAGTAAGATCGTAAACCTGTAGATTCTCTAATTTCTTCACGAACATGGCTTGTGGCGTTGTTTCCATGACGATCGTACCTCTAAGTTCAAGTTCAAGTTACAGCTCCTGCTTATCGTATGTTCGGAAGCGTCCTTTGCTCCGTAGTCTTTCCGTTGGAGTTCACTGCTCAAGTATTAGCCGAGATTTGTCTCTAACCACCGAGAGGCTAGGAAATGGTGATGCTATGACTGGAGGAGCTTTTGATTTTTATAAAGCAACTACATCTCTTACTGAAAGGTCGATCTCCACATCAAAGAAGGTCACTCTTGTAAGGCATGGTCTTAGCACTTGGAATGAAGAAAGTAGAGTTCAGGGAAGCTCGGACTTATCTCTCTTAACAGAAACTGGAGTGCTGCAAGCAGAAAAATGTAGAAGAGCCTTGGCAAACATAAATTTTGATAGATGTTTTGCAAGTCCAATATCACGCGCCAAGTCAACTGCTGAAGTTTTATGGCAAGGAAGGGAAGAAGAACTGGTTTTTCTTGATTCTCTGAAGGAAGCCCATCTGTTTTTTCTTGAAGGCATGAAAAATGTGGATGCTAAGAAGATTTATCCAAAGGAGTACACAACATGGCGAGAAGATCCTGCTAAATTTTGCGTAAATGGCGTCTACCCTCTTCGAAAAATTTGGGTAACAGCAAGAGAAGCTTGGAGGGAAATCTTGTTATCACCTGGAGAGAATTTTGTGGTGGTCACTCACAAATCTATATTGCGGGCACTCATCTGCACAGCCTTGGGGCTTGGCCCTGAGAGGTTCCGATCGGTCGAGATAAACAATGGCGGGATATCGGTATTCAAGTTCAACGAGAAAGGAGAGGCAATGCTTCAATCTTTGAATATGACAGCACACATGTACAGCGATCACACCTATTTATACTAAAACTAGGAAGTTTGTAGAAATTAGGAGAATGATACTGTATTGTTTTCTTTCTTTTTTTTTTATAAAGATGATAATTTGCATAATGAATCTCAGGCTTGTTTTGTGAGCAATATTGGCCTTTATTTAAATTATTGTGCGGAGCTCTTAGATGTTCGTGAGAGTGTCTTCATTGGTTTAGTGCCCTCTCGTGCTTGGCCAAAAGTACTCTTTTACTTCCATCATTTTTGTCCATCTAGACGTTTCA ATGGCTTGTGGCGTTGTTTCCATGACGATCGTACCTCTAAGTTCAAGTTCAAGTTACAGCTCCTGCTTATCGTATGTTCGGAAGCGTCCTTTGCTCCGTAGTCTTTCCGTTGGAGTTCACTGCTCAAGTATTAGCCGAGATTTGTCTCTAACCACCGAGAGGCTAGGAAATGGTGATGCTATGACTGGAGGAGCTTTTGATTTTTATAAAGCAACTACATCTCTTACTGAAAGGTCGATCTCCACATCAAAGAAGGTCACTCTTGTAAGGCATGGTCTTAGCACTTGGAATGAAGAAAGTAGAGTTCAGGGAAGCTCGGACTTATCTCTCTTAACAGAAACTGGAGTGCTGCAAGCAGAAAAATGTAGAAGAGCCTTGGCAAACATAAATTTTGATAGATGTTTTGCAAGTCCAATATCACGCGCCAAGTCAACTGCTGAAGTTTTATGGCAAGGAAGGGAAGAAGAACTGGTTTTTCTTGATTCTCTGAAGGAAGCCCATCTGTTTTTTCTTGAAGGCATGAAAAATGTGGATGCTAAGAAGATTTATCCAAAGGAGTACACAACATGGCGAGAAGATCCTGCTAAATTTTGCGTAAATGGCGTCTACCCTCTTCGAAAAATTTGGGTAACAGCAAGAGAAGCTTGGAGGGAAATCTTGTTATCACCTGGAGAGAATTTTGTGGTGGTCACTCACAAATCTATATTGCGGGCACTCATCTGCACAGCCTTGGGGCTTGGCCCTGAGAGGTTCCGATCGGTCGAGATAAACAATGGCGGGATATCGGTATTCAAGTTCAACGAGAAAGGAGAGGCAATGCTTCAATCTTTGAATATGACAGCACACATGTACAGCGATCACACCTATTTATACTAA MACGVVSMTIVPLSSSSSYSSCLSYVRKRPLLRSLSVGVHCSSISRDLSLTTERLGNGDAMTGGAFDFYKATTSLTERSISTSKKVTLVRHGLSTWNEESRVQGSSDLSLLTETGVLQAEKCRRALANINFDRCFASPISRAKSTAEVLWQGREEELVFLDSLKEAHLFFLEGMKNVDAKKIYPKEYTTWREDPAKFCVNGVYPLRKIWVTAREAWREILLSPGENFVVVTHKSILRALICTALGLGPERFRSVEINNGGISVFKFNEKGEAMLQSLNMTAHMYSDHTYLY Homology
BLAST of CmoCh18G003450 vs. ExPASy Swiss-Prot
Match: Q9FNJ9 (Probable 2-carboxy-D-arabinitol-1-phosphatase OS=Arabidopsis thaliana OX=3702 GN=At5g22620 PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.6e-46 Identity = 91/217 (41.94%), Postives = 141/217 (64.98%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy Swiss-Prot
Match: W5EP13 (2-carboxy-D-arabinitol-1-phosphatase OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.1e-39 Identity = 75/187 (40.11%), Postives = 121/187 (64.71%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy Swiss-Prot
Match: D3DFG8 (Phosphoserine phosphatase 1 OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=pspA PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.4e-16 Identity = 58/200 (29.00%), Postives = 95/200 (47.50%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy Swiss-Prot
Match: B7MNK4 (Probable phosphoglycerate mutase GpmB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=gpmB PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-12 Identity = 58/191 (30.37%), Postives = 88/191 (46.07%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy Swiss-Prot
Match: B7NW76 (Probable phosphoglycerate mutase GpmB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=gpmB PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-12 Identity = 58/191 (30.37%), Postives = 88/191 (46.07%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy TrEMBL
Match: A0A6J1GRV9 (probable 2-carboxy-D-arabinitol-1-phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111456886 PE=4 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 1.2e-161 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy TrEMBL
Match: A0A6J1JVU0 (probable 2-carboxy-D-arabinitol-1-phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111490159 PE=4 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 7.0e-159 Identity = 286/291 (98.28%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy TrEMBL
Match: A0A6J1CGN9 (probable 2-carboxy-D-arabinitol-1-phosphatase OS=Momordica charantia OX=3673 GN=LOC111010666 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149 Identity = 267/294 (90.82%), Postives = 281/294 (95.58%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy TrEMBL
Match: A0A5D3DRY6 (Putative 2-carboxy-D-arabinitol-1-phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00800 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.9e-146 Identity = 264/294 (89.80%), Postives = 280/294 (95.24%), Query Frame = 0
BLAST of CmoCh18G003450 vs. ExPASy TrEMBL
Match: A0A1S3B5H6 (probable 2-carboxy-D-arabinitol-1-phosphatase OS=Cucumis melo OX=3656 GN=LOC103486394 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.9e-146 Identity = 264/294 (89.80%), Postives = 280/294 (95.24%), Query Frame = 0
BLAST of CmoCh18G003450 vs. NCBI nr
Match: XP_022954708.1 (probable 2-carboxy-D-arabinitol-1-phosphatase [Cucurbita moschata]) HSP 1 Score: 578.9 bits (1491), Expect = 2.4e-161 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CmoCh18G003450 vs. NCBI nr
Match: KAG6573263.1 (putative 2-carboxy-D-arabinitol-1-phosphatase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159 Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0
BLAST of CmoCh18G003450 vs. NCBI nr
Match: XP_023542728.1 (probable 2-carboxy-D-arabinitol-1-phosphatase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 572.0 bits (1473), Expect = 2.9e-159 Identity = 288/291 (98.97%), Postives = 289/291 (99.31%), Query Frame = 0
BLAST of CmoCh18G003450 vs. NCBI nr
Match: XP_022994437.1 (probable 2-carboxy-D-arabinitol-1-phosphatase [Cucurbita maxima]) HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158 Identity = 286/291 (98.28%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CmoCh18G003450 vs. NCBI nr
Match: XP_022139853.1 (probable 2-carboxy-D-arabinitol-1-phosphatase [Momordica charantia]) HSP 1 Score: 538.5 bits (1386), Expect = 3.6e-149 Identity = 267/294 (90.82%), Postives = 281/294 (95.58%), Query Frame = 0
BLAST of CmoCh18G003450 vs. TAIR 10
Match: AT5G22620.1 (phosphoglycerate/bisphosphoglycerate mutase family protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.9e-47 Identity = 91/217 (41.94%), Postives = 141/217 (64.98%), Query Frame = 0
BLAST of CmoCh18G003450 vs. TAIR 10
Match: AT5G22620.2 (phosphoglycerate/bisphosphoglycerate mutase family protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.9e-47 Identity = 91/217 (41.94%), Postives = 141/217 (64.98%), Query Frame = 0
BLAST of CmoCh18G003450 vs. TAIR 10
Match: AT5G22620.3 (phosphoglycerate/bisphosphoglycerate mutase family protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.9e-47 Identity = 91/217 (41.94%), Postives = 141/217 (64.98%), Query Frame = 0
BLAST of CmoCh18G003450 vs. TAIR 10
Match: AT3G50520.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 69.3 bits (168), Expect = 5.7e-12 Identity = 56/204 (27.45%), Postives = 100/204 (49.02%), Query Frame = 0
BLAST of CmoCh18G003450 vs. TAIR 10
Match: AT5G04120.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 55.5 bits (132), Expect = 8.5e-08 Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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