CmoCh18G002780 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G002780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polyadenylate-binding protein RBP45-like
Location	Cmo_Chr18: 1831121 .. 1835104 (-)
RNA-Seq Expression	CmoCh18G002780
Synteny	CmoCh18G002780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCTCGCGGCTTGCCTGCTTCAGACTGCTAGGGTTAGGGTTTCTCCGATATCAACGAGATCCCCAAATTCCCCACATTTAACCAAATTCTTTCGTTGAACCGACGATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCCCCTTACATGATGATGCCGCCTCAAGCCCAGCCTGTCCCTCAGATGTGGCCTCAGCAACCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTATGTTAAAGAACACCGCATCTCCCCCATTTGAAATCATGCATGTATGATTTATTTTTCTTCTTTGTTAGCGGAAGATGTTGGAGTTTCTTGTATTATTATTTGTGGGAACGTTTGTTATTGCAATGTAATCTTTGTGGATAAGAATTGGATACGATTTTTGTTTTTAATTTCATATATAGAACTAATGAGATTTGTATCCCCAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAGAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAATACTTCTGGCGGTCAGCAATATGCGAAAAGTAAATACCACTCTGCCCCCAAAGGGGAAATTTTCCTTTTATCTTTTTAATGAAAAACAGAAGTTCGATTTTCTATGGATTATATTCTGCACTATTCACTCATTGTATGTTTCCGATTGTGTTTAGAGCTTGGGTCTGCATCTTGCTTTCAATATGTCAAGATGAATTCCAACCTTCTTTATTTTCTGTTGGACTCTTCTCCTCTCCGTTACTTTTATTTTTTAGTTTCCTAGCATTTAAATTTCCCTCTGGTTATACCTTGGAAGATTAGTAGCCTTTCATGCCTTTTCCTTCAGTGTACTTCCAATTCGAACTTTGGTCACTGTAACTACTGTAAAAAAGATTCGTAAACTTATAGAACTCCTCTTTTCTCTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTTCCCGCAAATGTCTTACCCTTTACTTTCTATGTAGCATATTTATGCTACGTTTTTTAATTCACCTTTAGTTCTGCAATGTTGAGTTTTTCCTTTCATTTGCGTAGGTATTTTTTTTCCCTGTCCCTGGCATTTTTCACTATAGCTAACTCCATTAGATTTTTTTTTCCAAGTTTAGGTCACTTAGGTTCTTTAGCTAGATGAATTATCAAAATTTCCAATAACTGGGATAGCAGGCTAGTTTGATTCTGAACTGTCCTTCTACAACAGCTGCAGCAGGCCGCATAGGCTGTGCTTGTTCTTCACCTCCTAGTATTTAGGGTTTATGGGATTTACTGTCCTATGTTTTCATCTCAGTATGTAGTGGTTGGGTTCCATATATGTAGACGAATCCACTACCTACCGAAGAATTTTGATACGTTTCTCGATCTGCATGGGTCCTCATTTCTTATTAGCTTTGCGTTCTGTGTCTTGATACTTTGTATTGATATTGTTTGGAATATTCTCTTCTTATTTCATTGTATTGAACTTATTTATTTTCATTTATACTTTGTATGTGCCTCTTATGTGAATAGGATTCTATTCATTGATCTTCACTGATTTAATAGGTGGCTACCTTAACCTCCTGTAGTGTTTTAGTGGGCAGGATTTTCAATATGGCATAATAGGGTTGCCTTGAGTCAAAAGTTAGGGAGGCTATTTGTGATATTTAGTTCTTTAGGTTGTGAAGCTTTATAATATCCCCTTTTTTTTGTATTACTCTGTATTATTATGTGTGGATTTTTTCTCATCTGCTGTGGGCATAATATGGAATCACTTTATTTCCTATTTTGCATTCATTATGTTCAGTACGCATGTCTTCTTTTCTTTATATTTTGGCCTTCATTTGAATGTTTTTGTAATTTCAATGCTTACATCTCTTGTCAAATAAAAGAAGGCCTATGCTTTTAATGACAGAGGCTTGCGCCTCTGGGTTTCTTCCGCATGTGTGATTTTGAACATGTAAGCCTCAGTGAAAGCTAGGTTTTAGACAAATTAATTAAAGCAATTTTAAGATGTGGGATGTGTTCTACTTCCAATTAAATAATGTTTGTGTTGTTTTTCCATGTATCTTGGTTTTCTATTCATTTGAATTTATTTTGTTTTAGTATTGCATATTTTTATAGCTATTATTCACCATGGTGATGTTTTGATATGACTCCATTAAGTTTACATGTCATAGGAAACAGTGTCTTTTTTTAGGAAAAATGACACTGCTCTGGAATTTCTCAGTTCAATATTTGTTAAAAGGTGTCATTTTAGTTTAATATTTGCAAATGCAGCTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCAGTAATTTTCTATAGCAATATAATCTCATGGACATGTTTGTGAGTTGTTATTTGATCTTGTTCCAGATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTACGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTCGTTCAATTTTCAGACAGGTTGGCATTTTCGAAAACTTTTATGAACCAACCCCCTCCCAAACTCTTGGTGTTTGCTGACAAGTAGTTATTTTGTTTTCCTCAATACCTATTTTAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGGTAGTAGTATTGTTGTACTTCACTTATTATCAAGGATTGATTTATATTGAAACAAATAGTTATGATCCTGTAATGCAAATTTGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACAGTGGCTATGGCGGTGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATACATGTAGATGACGAAGCTGTAATTCTTGTGTCCCGCCTCTGCTCGAACACAAGACCCTTGAACTTCTACTTGGCATTAGTAGAAGATTTTGGGGATGTTACTCATCTATTCTGAACATTCTGTGTATGTGACTCTGATGACATGTTGTCACTTGTGTGTTGTATTTGGTGTTAGAAGGTTTTGCGTGTCGTGTCGTGTTATTTGTTCTATTGTAGGATCATATCTATCCAAGAAGCGAGCTGAATTATCGGATGGTAATTTTCTGAAAAATCCTTGCTGAAAAAGCTCCTACGTGGGTGAAGTGCTGCTACTCCTTTTCTTGTTGGCCTTGCTAATTTCACTTATTCTGCCATCAATTTGTTTGATTTACACTCGTAGTTGCAGTATTCACAGGGCAATTGACAATTTACAATAGAC

mRNA sequence

TCGCTCGCGGCTTGCCTGCTTCAGACTGCTAGGGTTAGGGTTTCTCCGATATCAACGAGATCCCCAAATTCCCCACATTTAACCAAATTCTTTCGTTGAACCGACGATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCCCCTTACATGATGATGCCGCCTCAAGCCCAGCCTGTCCCTCAGATGTGGCCTCAGCAACCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAGAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAATACTTCTGGCGGTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTACGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTCGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACAGTGGCTATGGCGGTGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATACATGTAGATGACGAAGCTGTAATTCTTGTGTCCCGCCTCTGCTCGAACACAAGACCCTTGAACTTCTACTTGGCATTAGTAGAAGATTTTGGGGATGTTACTCATCTATTCTGAACATTCTGTGTATGTGACTCTGATGACATGTTGTCACTTGTGTGTTGTATTTGGTGTTAGAAGGTTTTGCGTGTCGTGTCGTGTTATTTGTTCTATTGTAGGATCATATCTATCCAAGAAGCGAGCTGAATTATCGGATGGTAATTTTCTGAAAAATCCTTGCTGAAAAAGCTCCTACGTGGGTGAAGTGCTGCTACTCCTTTTCTTGTTGGCCTTGCTAATTTCACTTATTCTGCCATCAATTTGTTTGATTTACACTCGTAGTTGCAGTATTCACAGGGCAATTGACAATTTACAATAGAC

Coding sequence (CDS)

ATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCCCCTCAGTACCAGCAACAGCAACCCCCTTACATGATGATGCCGCCTCAAGCCCAGCCTGTCCCTCAGATGTGGCCTCAGCAACCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAGAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAATACTTCTGGCGGTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTACGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTCGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACAGTGGCTATGGCGGTGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATACATGTAG

Protein sequence

MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM

Homology

[Close]

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 4.3e-140
Identity = 274/415 (66.02%), Postives = 307/415 (73.98%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAP------QYQQQQPP-----YMMMPPQAQPVPQM-------WPQ 60
           M P  GVA    P  AP      QYQQQ PP       MMPPQ    PQ        W Q
Sbjct: 1   MMPQSGVA---QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 61  QPQ-----AVSPQGQPPQP-ANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIR 120
           QP      A++     P P  N +EVR+LWIGDLQYWMDENYL  CF HTGE+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 121 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYT 180
           NKQTGQSEGYGF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 181 IFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTE 240
           IFVGDLA DVTDY+LQETF++ Y+S++GAKVV DR+TGR+KGYGFVKF DE+EQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240

Query: 241 MNGVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTD 300
           MNGVLCS+RPMRIGPAANK   G  Q  K +YQNPQ TQ E+DPNNTTIFVG LD  V +
Sbjct: 241 MNGVLCSTRPMRIGPAANKKPVGTPQ--KATYQNPQATQGESDPNNTTIFVGGLDPTVAE 300

Query: 301 EHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSP 360
           EHLRQVFS YGELVHVKI AGKRCGFVQF  R+ AE+AL  LNGTQ+GGQ+IRLSWGRSP
Sbjct: 301 EHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSP 360

Query: 361 SNKQPQADPNQWNG-GGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQP 390
           S+K  Q D  QW G GG YYGYGQGYE Y YAP AQDPNM+Y  Y  GY NYQQP
Sbjct: 361 SSK--QTDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNY-PGYANYQQP 407

[Close]

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-134
Identity = 273/415 (65.78%), Postives = 309/415 (74.46%), Query Frame = 0


Query: 2   QPAPGVALHNMPHQAP------QYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQ 61
           QP PG  L   PH AP      QY  QQP    +   A P PQMW   PQA +P     Q
Sbjct: 4   QPPPGGIL---PHHAPPPSAQQQYGYQQP--YGIAGAAPPPPQMW--NPQAAAPPS--VQ 63

Query: 62  PANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRP 121
           P  ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  
Sbjct: 64  PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHA 123

Query: 122 AAERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQE 181
           AAERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L E
Sbjct: 124 AAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLE 183

Query: 182 TFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAA 241
           TFRA Y S+KGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA
Sbjct: 184 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 243

Query: 242 NKNTSGGQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHV 301
           +K    GQ   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHV
Sbjct: 244 SKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHV 303

Query: 302 KIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGG 361
           KIPAGKRCGFVQFS++SCAEEALRMLNG Q+GG  +RLSWGRSPSNKQ   DP+Q+    
Sbjct: 304 KIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY--- 363

Query: 362 GYYGYGQGYENYSYAPAAQDPNMFYSGY-GGGY-GNYQ------QPAPQQPSQQQ 399
            Y GYGQG E Y Y    QDPN +Y GY GGGY G YQ      Q  PQQP QQQ
Sbjct: 364 -YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 399

[Close]

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.0e-133
Identity = 261/393 (66.41%), Postives = 296/393 (75.32%), Query Frame = 0


Query: 13  PHQAPQYQQQQPPYMM-MPPQAQPVPQMWPQQPQAVSPQGQP-PQPANADEVRTLWIGDL 72
           PHQ      QQPP M   PP      Q+ P QP   +P  Q  P PA ADEV+TLWIGDL
Sbjct: 38  PHQYGAPPPQQPPAMWGQPPPQAHYGQVPPPQPYYAAPPPQAMPAPAAADEVKTLWIGDL 97

Query: 73  QYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMP 132
           Q WMDE+Y++NCFA TGEV SVK+IR+KQ+GQ +GYGF+EF +R AA+R+LQTYNG  MP
Sbjct: 98  QPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNGQMMP 157

Query: 133 NGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDR 192
           N    FRLNWASAGEKR DD+PDYTIFVGDLA DVTDY+LQETFR  Y S+KGAKVV D+
Sbjct: 158 NVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDK 217

Query: 193 LTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNP 252
           +T R+KGYGFVKFGD TEQ RAMTEMNG+LCSSRPMRIGPAANK T+G Q+       N 
Sbjct: 218 MTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE----RVPNA 277

Query: 253 QGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCA 312
           QG Q+ENDPNNTTIFVG LD NVT++ L+QVF+ YGE+VHVKIP GKRCGFVQ+ +R  A
Sbjct: 278 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSA 337

Query: 313 EEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGYY-GYGQGYENYSYA 372
           E+AL +L GT IGGQN+RLSWGRS SNKQPQ D NQW    G GGYY GYGQGYE Y   
Sbjct: 338 EQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQGYEAYGGY 397

Query: 373 PAAQDPNMFYSGYGGGYGNYQQP--APQQPSQQ 398
              QDPNM+  G   GY NYQQ   A QQP QQ
Sbjct: 398 AQPQDPNMYGYGAYAGYPNYQQQQVAQQQPPQQ 425

[Close]

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 3.1e-130
Identity = 251/400 (62.75%), Postives = 292/400 (73.00%), Query Frame = 0


Query: 12  MPHQAPQYQQQQPPYMMMPPQAQ--PVPQMWPQQ--PQAVSPQ------GQPPQPANADE 71
           +P     Y QQQ  +MM   Q Q    P  W QQ  P +  PQ      G    P +A E
Sbjct: 19  IPSDQQAYLQQQQSWMMQHQQQQQGQPPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGE 78

Query: 72  VRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 131
           +R+LWIGDLQ WMDENYL N F  TGE ++ KVIRNKQ G SEGYGFIEF+    AER L
Sbjct: 79  IRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNL 138

Query: 132 QTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYT 191
           QTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+A Y+
Sbjct: 139 QTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYS 198

Query: 192 SLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGG 251
           S+KGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSSRPMR GPAANK     
Sbjct: 199 SVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTM 258

Query: 252 QQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRC 311
           Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VF Q+GELVHVKIPAGKRC
Sbjct: 259 Q---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC 318

Query: 312 GFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGY-GQ 371
           GFVQ+++R+CAE+AL +LNGTQ+GGQ+IRLSWGRSPSNKQ Q D  Q+ GGGGYYGY  Q
Sbjct: 319 GFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQ 378

Query: 372 GYENYSYAPAAQDPNMFYSGY-GGGYGNYQQPAPQQPSQQ 398
           GYE Y YAP  QDPN +Y GY GGGYGNYQQP   Q  QQ
Sbjct: 379 GYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 6.1e-118
Identity = 232/375 (61.87%), Postives = 274/375 (73.07%), Query Frame = 0


Query: 22  QQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQ-PANADEVRTLWIGDLQYWMDENYLF 81
           QQ  +MMM  Q Q         P      G   Q P +A +V++LWIGDLQ WMDENY+ 
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIM 77

Query: 82  NCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNW 141
           + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG PMP+  Q FRLNW
Sbjct: 78  SVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNW 137

Query: 142 --ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKG 201
             A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y S+KGAKVV+DR TGR+KG
Sbjct: 138 AQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKG 197

Query: 202 YGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNPQGTQ-NE 261
           YGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQN QG    +
Sbjct: 198 YGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGANAGD 257

Query: 262 NDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRM 321
           NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++ AE AL +
Sbjct: 258 NDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSV 317

Query: 322 LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGY---GQGYENYSYAPAAQDPN 381
           LNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN GGGYYGY    QG   Y+  P  QDPN
Sbjct: 318 LNGTQLGGQSIRLSWGRSPNK---QSDQAQWN-GGGYYGYPPQPQGGYGYAAQPPTQDPN 377

Query: 382 MFYSGYGGGYGNYQQ 389
            +Y GY  GYGNYQQ
Sbjct: 378 AYYGGY-TGYGNYQQ 384

[Close]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL
Match: A0A6J1GRK0 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456823 PE=4 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 6.3e-235
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360

Query: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 402

[Close]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL
Match: A0A6J1JV65 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490024 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 1.8e-234
Identity = 401/402 (99.75%), Postives = 401/402 (99.75%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360

Query: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           ENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 ENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYM 402

[Close]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL
Match: A0A6J1GRE4 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456823 PE=4 SV=1)

HSP 1 Score: 818.1 bits (2112), Expect = 1.6e-233
Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ-PQADPNQWNGGGGYYGYGQG 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ PQADPNQWNGGGGYYGYGQG
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGGYYGYGQG 360

Query: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403

[Close]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL
Match: A0A6J1JYI0 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490024 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 4.5e-233
Identity = 401/403 (99.50%), Postives = 401/403 (99.50%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ-PQADPNQWNGGGGYYGYGQG 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ PQADPNQWNGGGGYYGYGQG
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGGYYGYGQG 360

Query: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           YENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 YENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYM 403

[Close]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL
Match: A0A5A7UNS2 (Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005850 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.2e-220
Identity = 386/408 (94.61%), Postives = 392/408 (96.08%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMM---PPQAQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVA HNMPHQAPQYQQQQPPYMMM   PPQAQPVPQMWPQQPQA SPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPA 60

Query: 61  NADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           N DEVRTLWIGDLQYWMDENY+FNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGT MPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           Y S+KGAKVVIDRLTGRTKGYGFVKFGDE+EQ+RAMTEMNGV CSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           G QQ++KTSYQNP GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGYY 360
           RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN   GGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           GYGQGYENYSYAPAAQDPNMFYSGY GGYGNYQQPA QQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYSGY-GGYGNYQQPAAQQPSQQQGGYM 407

[Close]

BLAST of CmoCh18G002780 vs. NCBI nr
Match: XP_022954608.1 (polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata] >XP_023542693.1 polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573195.1 Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 822.8 bits (2124), Expect = 1.3e-234
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360

Query: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 402

[Close]

BLAST of CmoCh18G002780 vs. NCBI nr
Match: XP_022994222.1 (polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 821.2 bits (2120), Expect = 3.8e-234
Identity = 401/402 (99.75%), Postives = 401/402 (99.75%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGY 360

Query: 361 ENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           ENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 ENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYM 402

[Close]

BLAST of CmoCh18G002780 vs. NCBI nr
Match: XP_022954607.1 (polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita moschata] >XP_023542692.1 polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 818.1 bits (2112), Expect = 3.2e-233
Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ-PQADPNQWNGGGGYYGYGQG 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ PQADPNQWNGGGGYYGYGQG
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGGYYGYGQG 360

Query: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403

[Close]

BLAST of CmoCh18G002780 vs. NCBI nr
Match: XP_022994221.1 (polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 816.6 bits (2108), Expect = 9.4e-233
Identity = 401/403 (99.50%), Postives = 401/403 (99.50%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300
           QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG
Sbjct: 241 QYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCG 300

Query: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ-PQADPNQWNGGGGYYGYGQG 360
           FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQ PQADPNQWNGGGGYYGYGQG
Sbjct: 301 FVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGGYYGYGQG 360

Query: 361 YENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           YENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 YENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYM 403

[Close]

BLAST of CmoCh18G002780 vs. NCBI nr
Match: XP_038894239.1 (polyadenylate-binding protein RBP45-like isoform X2 [Benincasa hispida])

HSP 1 Score: 783.9 bits (2023), Expect = 6.7e-223
Identity = 389/408 (95.34%), Postives = 395/408 (96.81%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMM---PPQAQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVA HNMPHQAPQYQQQQPPYMMM   PPQ QPVPQMWPQQPQAVSPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAVSPQGQPPQPA 60

Query: 61  NADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           +ADEVRTLWIGDLQYWMDENYLFNCFAHTGE+SSVKVIRNKQTGQSEGYGF+EFLTRPAA
Sbjct: 61  SADEVRTLWIGDLQYWMDENYLFNCFAHTGEISSVKVIRNKQTGQSEGYGFLEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           YTS+KGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240

Query: 241 GGQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           G QQYAKTSYQ+  GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GSQQYAKTSYQSTPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN---GGGGYY 360
           RCGFVQFSDRSCAEEALR+LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWN   GGGGYY
Sbjct: 301 RCGFVQFSDRSCAEEALRILNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGYY 360

Query: 361 GYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQQGGYM 403
           GYGQGYENYSYAPAAQDPNMFY GY GGYGNYQQPAPQQPSQQQGGYM
Sbjct: 361 GYGQGYENYSYAPAAQDPNMFYGGY-GGYGNYQQPAPQQPSQQQGGYM 407

[Close]

BLAST of CmoCh18G002780 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 481.1 bits (1237), Expect = 8.7e-136
Identity = 273/415 (65.78%), Postives = 309/415 (74.46%), Query Frame = 0


Query: 2   QPAPGVALHNMPHQAP------QYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQ 61
           QP PG  L   PH AP      QY  QQP    +   A P PQMW   PQA +P     Q
Sbjct: 4   QPPPGGIL---PHHAPPPSAQQQYGYQQP--YGIAGAAPPPPQMW--NPQAAAPPS--VQ 63

Query: 62  PANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRP 121
           P  ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  
Sbjct: 64  PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHA 123

Query: 122 AAERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQE 181
           AAERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L E
Sbjct: 124 AAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLE 183

Query: 182 TFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAA 241
           TFRA Y S+KGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA
Sbjct: 184 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 243

Query: 242 NKNTSGGQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHV 301
           +K    GQ   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHV
Sbjct: 244 SKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHV 303

Query: 302 KIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGG 361
           KIPAGKRCGFVQFS++SCAEEALRMLNG Q+GG  +RLSWGRSPSNKQ   DP+Q+    
Sbjct: 304 KIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY--- 363

Query: 362 GYYGYGQGYENYSYAPAAQDPNMFYSGY-GGGY-GNYQ------QPAPQQPSQQQ 399
            Y GYGQG E Y Y    QDPN +Y GY GGGY G YQ      Q  PQQP QQQ
Sbjct: 364 -YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 399

[Close]

BLAST of CmoCh18G002780 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 466.5 bits (1199), Expect = 2.2e-131
Identity = 251/400 (62.75%), Postives = 292/400 (73.00%), Query Frame = 0


Query: 12  MPHQAPQYQQQQPPYMMMPPQAQ--PVPQMWPQQ--PQAVSPQ------GQPPQPANADE 71
           +P     Y QQQ  +MM   Q Q    P  W QQ  P +  PQ      G    P +A E
Sbjct: 19  IPSDQQAYLQQQQSWMMQHQQQQQGQPPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGE 78

Query: 72  VRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 131
           +R+LWIGDLQ WMDENYL N F  TGE ++ KVIRNKQ G SEGYGFIEF+    AER L
Sbjct: 79  IRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNL 138

Query: 132 QTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYT 191
           QTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+A Y+
Sbjct: 139 QTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYS 198

Query: 192 SLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGG 251
           S+KGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSSRPMR GPAANK     
Sbjct: 199 SVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTM 258

Query: 252 QQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRC 311
           Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VF Q+GELVHVKIPAGKRC
Sbjct: 259 Q---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC 318

Query: 312 GFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGY-GQ 371
           GFVQ+++R+CAE+AL +LNGTQ+GGQ+IRLSWGRSPSNKQ Q D  Q+ GGGGYYGY  Q
Sbjct: 319 GFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQ 378

Query: 372 GYENYSYAPAAQDPNMFYSGY-GGGYGNYQQPAPQQPSQQ 398
           GYE Y YAP  QDPN +Y GY GGGYGNYQQP   Q  QQ
Sbjct: 379 GYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of CmoCh18G002780 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 425.6 bits (1093), Expect = 4.3e-119
Identity = 232/375 (61.87%), Postives = 274/375 (73.07%), Query Frame = 0


Query: 22  QQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQ-PANADEVRTLWIGDLQYWMDENYLF 81
           QQ  +MMM  Q Q         P      G   Q P +A +V++LWIGDLQ WMDENY+ 
Sbjct: 18  QQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIM 77

Query: 82  NCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNW 141
           + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG PMP+  Q FRLNW
Sbjct: 78  SVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNW 137

Query: 142 --ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKG 201
             A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y S+KGAKVV+DR TGR+KG
Sbjct: 138 AQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKG 197

Query: 202 YGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNPQGTQ-NE 261
           YGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQN QG    +
Sbjct: 198 YGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGANAGD 257

Query: 262 NDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRM 321
           NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++ AE AL +
Sbjct: 258 NDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSV 317

Query: 322 LNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGY---GQGYENYSYAPAAQDPN 381
           LNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN GGGYYGY    QG   Y+  P  QDPN
Sbjct: 318 LNGTQLGGQSIRLSWGRSPNK---QSDQAQWN-GGGYYGYPPQPQGGYGYAAQPPTQDPN 377

Query: 382 MFYSGYGGGYGNYQQ 389
            +Y GY  GYGNYQQ
Sbjct: 378 AYYGGY-TGYGNYQQ 384

[Close]

BLAST of CmoCh18G002780 vs. TAIR 10
Match: AT1G11650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 386.7 bits (992), Expect = 2.2e-107
Identity = 212/316 (67.09%), Postives = 243/316 (76.90%), Query Frame = 0


Query: 2   QPAPGVALHNMPHQAP------QYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQ 61
           QP PG  L   PH AP      QY  QQP    +   A P PQMW   PQA +P     Q
Sbjct: 4   QPPPGGIL---PHHAPPPSAQQQYGYQQP--YGIAGAAPPPPQMW--NPQAAAPPS--VQ 63

Query: 62  PANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRP 121
           P  ADE+RTLWIGDLQYWMDEN+L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  
Sbjct: 64  PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHA 123

Query: 122 AAERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQE 181
           AAERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L E
Sbjct: 124 AAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLE 183

Query: 182 TFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAA 241
           TFRA Y S+KGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA
Sbjct: 184 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 243

Query: 242 NKNTSGGQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHV 301
           +K    GQ   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHV
Sbjct: 244 SKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHV 303

Query: 302 KIPAGKRCGFVQFSDR 308
           KIPAGKRCGFVQFS++
Sbjct: 304 KIPAGKRCGFVQFSEK 306

[Close]

BLAST of CmoCh18G002780 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 375.9 bits (964), Expect = 3.9e-104
Identity = 208/374 (55.61%), Postives = 250/374 (66.84%), Query Frame = 0


Query: 39  MWPQQPQAVSPQGQPPQPANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNK 98
           M P QP    PQG    P   +EVRTLWIGDLQYW+DENYL +CF+ TGE+ SVKVIRNK
Sbjct: 4   MHPPQP----PQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNK 63

Query: 99  QTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYTIF 158
            TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IF
Sbjct: 64  ITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIF 123

Query: 159 VGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMN 218
           VGDLA DVTDY+LQETFR  Y+S++GAKVV D  TGR+KGYGFVKF +E+E+ RAM EMN
Sbjct: 124 VGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMN 183

Query: 219 GVLCSSRPMRIGPAANKNTSGGQQYAKTSYQNPQG---------TQNENDPNNTTIFVGN 278
           G+ CS+RPMRI  A  K   G QQ   T    P              E+D   TTI V N
Sbjct: 184 GLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVAN 243

Query: 279 LDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIR 338
           LD NVT+E L++ FSQ GE+++VKIPA K  G+VQF  R  AEEA++ + G  IG Q +R
Sbjct: 244 LDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVR 303

Query: 339 LSWGRSPSNK--QPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMF-YSGYGGGYGN 398
           +SW ++P       QADPNQWN   GYYGYGQGY+ Y+Y  A QDP+++ Y GYG     
Sbjct: 304 ISWSKNPGQDGWVTQADPNQWN---GYYGYGQGYDAYAYG-ATQDPSVYAYGGYG----- 360

Query: 399 YQQPAPQQPSQQQG 400
                PQ P Q +G
Sbjct: 364 ----YPQYPQQGEG 360

The following BLAST results are available for this feature:

BLAST of CmoCh18G002780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB4	4.3e-140	66.02	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SAB3	1.2e-134	65.78	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
Q0J9Y2	1.0e-133	66.41	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q93W34	3.1e-130	62.75	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]
Q9FPJ8	6.1e-118	61.87	Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P...	[more]

BLAST of CmoCh18G002780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRK0	6.3e-235	100.00	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JV65	1.8e-234	99.75	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GRE4	1.6e-233	99.75	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JYI0	4.5e-233	99.50	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A5A7UNS2	1.2e-220	94.61	Polyadenylate-binding protein RBP45-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CmoCh18G002780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954608.1	1.3e-234	100.00	polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata] >XP_023...	[more]
XP_022994222.1	3.8e-234	99.75	polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita maxima]	[more]
XP_022954607.1	3.2e-233	99.75	polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita moschata] >XP_023...	[more]
XP_022994221.1	9.4e-233	99.50	polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita maxima]	[more]
XP_038894239.1	6.7e-223	95.34	polyadenylate-binding protein RBP45-like isoform X2 [Benincasa hispida]	[more]

BLAST of CmoCh18G002780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11650.2	8.7e-136	65.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G27000.1	2.2e-131	62.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	4.3e-119	61.87	RNA-binding protein 45A	[more]
AT1G11650.1	2.2e-107	67.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	3.9e-104	55.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 155..229 e-value: 9.5E-17 score: 71.6 coord: 64..139 e-value: 3.3E-14 score: 63.2 coord: 263..330 e-value: 2.4E-24 score: 96.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 156..224 e-value: 7.9E-11 score: 41.6 coord: 264..328 e-value: 3.0E-18 score: 65.4 coord: 65..129 e-value: 1.5E-12 score: 47.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 262..334 score: 18.308004
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 63..143 score: 15.869082
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 154..233 score: 15.732639
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 9..153 e-value: 1.7E-24 score: 88.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 154..229 e-value: 5.9E-19 score: 70.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 238..401 e-value: 2.8E-29 score: 104.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR47640:SF48	POLYADENYLATE-BINDING PROTEIN RBP45B	coord: 17..394
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 17..394
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 153..232 e-value: 9.68858E-48 score: 155.515
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 261..332 e-value: 2.18827E-38 score: 130.886
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 64..142 e-value: 3.8285E-47 score: 153.958
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 61..236
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 245..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G002780.1	CmoCh18G002780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding