CmoCh17G013070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G013070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	maternal effect embryo arrest 60
Location	Cmo_Chr17: 10241375 .. 10242044 (-)
RNA-Seq Expression	CmoCh17G013070
Synteny	CmoCh17G013070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGTAAGCTCAATTTCTCTTCGATTCCCCCTTCTTTTTCTTTTCATTTTCAGCTCATTTTCCTGTTTCTGATCAGATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGTACTTCATCGGCGTTGTCTTCTTCGTCGACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGACGTCGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATCTGAAGGTGCTGAGATTAGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

mRNA sequence

ATGGACGAATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGTACTTCATCGGCGTTGTCTTCTTCGTCGACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGACGTCGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATCTGAAGGTGCTGAGATTAGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

Coding sequence (CDS)

ATGGACGAATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGTACTTCATCGGCGTTGTCTTCTTCGTCGACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGACGTCGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATCTGAAGGTGCTGAGATTAGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

Protein sequence

MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH

Homology

[Close]

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL
Match: A0A6J1GPF8 (uncharacterized protein LOC111455936 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455936 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.3e-95
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 181 VTSALLVYISTAIYAFLH 198

[Close]

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL
Match: A0A6J1JM46 (uncharacterized protein LOC111488123 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488123 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.1e-94
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           M+ESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 76  MNESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 135

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 136 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 195

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVL
Sbjct: 196 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVL 255

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 256 VTSALLVYISTAIYAFLH 273

[Close]

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL
Match: A0A6J1GN18 (uncharacterized protein LOC111455936 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455936 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.2e-89
Identity = 186/189 (98.41%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 181 VTSALLVYI 190
           VTSALL+++
Sbjct: 181 VTSALLLHV 189

[Close]

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL
Match: A0A6J1JT84 (uncharacterized protein LOC111488123 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488123 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.5e-88
Identity = 184/189 (97.35%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           M+ESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 76  MNESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 135

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 136 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 195

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVL
Sbjct: 196 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVL 255

Query: 181 VTSALLVYI 190
           VTSALL+++
Sbjct: 256 VTSALLLHV 264

[Close]

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL
Match: A0A6J1GN57 (uncharacterized protein LOC111455936 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455936 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.2e-86
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of CmoCh17G013070 vs. NCBI nr
Match: XP_023547454.1 (uncharacterized protein LOC111806395 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 85  MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 144

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 145 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 204

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 205 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 264

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 265 VTSALLVYISTAIYAFLH 282

[Close]

BLAST of CmoCh17G013070 vs. NCBI nr
Match: XP_022953364.1 (uncharacterized protein LOC111455936 isoform X3 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 181 VTSALLVYISTAIYAFLH 198

[Close]

BLAST of CmoCh17G013070 vs. NCBI nr
Match: KAG7014577.1 (hypothetical protein SDJN02_24755 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSA+SSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSAMSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 181 VTSALLVYISTAIYAFLH 198

[Close]

BLAST of CmoCh17G013070 vs. NCBI nr
Match: KAG6576060.1 (hypothetical protein SDJN03_26699, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           MDESETYPKEYYNDRSRADGIRTSSA+SSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 76  MDESETYPKEYYNDRSRADGIRTSSAMSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 135

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 136 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 195

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 196 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 255

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 256 VTSALLVYISTAIYAFLH 273

[Close]

BLAST of CmoCh17G013070 vs. NCBI nr
Match: XP_022991542.1 (uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60
           M+ESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 76  MNESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 135

Query: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 136 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 195

Query: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVL
Sbjct: 196 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVL 255

Query: 181 VTSALLVYISTAIYAFLH 199
           VTSALLVYISTAIYAFLH
Sbjct: 256 VTSALLVYISTAIYAFLH 273

[Close]

BLAST of CmoCh17G013070 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 5.3e-70
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 24  SSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARK 83
           +S+ SS +TTSVHV+ALDGLVNVNSLFTIAVFVGLSL TPGQHSL+  S CDA  DVA+K
Sbjct: 15  ASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKK 74

Query: 84  LLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVM 143
           LLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVM
Sbjct: 75  LLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVM 134

Query: 144 GCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 199
           GCLFLMLSMVNVIQIRLG+LSCGSKSA  AV  L+ LV+SALL+YISTAIYAF H
Sbjct: 135 GCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

[Close]

BLAST of CmoCh17G013070 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 5.3e-70
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 24  SSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARK 83
           +S+ SS +TTSVHV+ALDGLVNVNSLFTIAVFVGLSL TPGQHSL+  S CDA  DVA+K
Sbjct: 15  ASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKK 74

Query: 84  LLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVM 143
           LLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVM
Sbjct: 75  LLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVM 134

Query: 144 GCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 199
           GCLFLMLSMVNVIQIRLG+LSCGSKSA  AV  L+ LV+SALL+YISTAIYAF H
Sbjct: 135 GCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

[Close]

BLAST of CmoCh17G013070 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51
Identity = 107/174 (61.49%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 23  TSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVAR 82
           ++++ S++STTSVHVTALDG+V+ NSLFT+AVFVG+S   P   +L + + C AG DV R
Sbjct: 16  SNTSHSTTSTTSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLTLTDRTECSAGRDVER 75

Query: 83  KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSV 142
            L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ DE F+A+IN  VLR G++ +A GS+
Sbjct: 76  DLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSI 135

Query: 143 MGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAF 197
           +GC+FL+LS+V+VIQ+RLG+LSCG+  A+H V  L+VLV+SAL VYI T  Y+F
Sbjct: 136 LGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

[Close]

BLAST of CmoCh17G013070 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 131.3 bits (329), Expect = 8.3e-31
Identity = 82/172 (47.67%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 32  TTSVHVTALDGLVNVNSLFTIAVFVGLSLT-TPGQHSLQNSSVCDAGIDVARKLLVFEVV 91
           TTS+H+TALDG+VNVNSLFT+AVF+GL+   T   +SL     C     +A  L+ F V 
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVY 61

Query: 92  SFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRLGMLASAVGSVMGC 151
           SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LR GM+ S +GSV GC
Sbjct: 62  SFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGC 121

Query: 152 LFLMLSMVNVIQIRLGMLSCGSKSAVH-AVTALLVLVTSALLVYISTAIYAF 197
            FLML+++NV+QI+LG L CG+    + AV  L++LV SAL +Y+S  +YAF
Sbjct: 122 GFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of CmoCh17G013070 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-25
Identity = 80/189 (42.33%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 32  TTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS-----------VCDAGIDV 91
           TT +HVTA+DG+VNVNSLF++A+F+G  LTT G  +   SS           +   G  +
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLG--LTTSGNITFPVSSSASENHHLRRCISAKGPAL 77

Query: 92  ARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVL 151
           A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  L
Sbjct: 78  AERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAAL 137

Query: 152 RLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSC-GSKSAVHAVTALLVLVTSALLVYI 199
           R+G++AS V SV+GC FL +++V+++QI+LG L C  S  A+ A+  L+VLV SAL++Y+
Sbjct: 138 RVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYV 197

The following BLAST results are available for this feature:

BLAST of CmoCh17G013070 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G013070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPF8	6.3e-95	100.00	uncharacterized protein LOC111455936 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JM46	9.1e-94	98.99	uncharacterized protein LOC111488123 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GN18	5.2e-89	98.41	uncharacterized protein LOC111455936 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JT84	7.5e-88	97.35	uncharacterized protein LOC111488123 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GN57	3.2e-86	99.45	uncharacterized protein LOC111455936 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh17G013070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547454.1	1.3e-94	100.00	uncharacterized protein LOC111806395 [Cucurbita pepo subsp. pepo]	[more]
XP_022953364.1	1.3e-94	100.00	uncharacterized protein LOC111455936 isoform X3 [Cucurbita moschata]	[more]
KAG7014577.1	2.2e-94	99.49	hypothetical protein SDJN02_24755 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576060.1	2.2e-94	99.49	hypothetical protein SDJN03_26699, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022991542.1	1.9e-93	98.99	uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima]	[more]

BLAST of CmoCh17G013070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07510.1	5.3e-70	82.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	5.3e-70	82.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	3.3e-51	61.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05950.1	8.3e-31	47.67	maternal effect embryo arrest 60	[more]
AT3G46890.1	4.0e-25	42.33	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 1..197
None	No IPR available	PANTHER	PTHR33430:SF6	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013070.1	CmoCh17G013070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane