CmoCh17G012200 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G012200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr17: 9726696 .. 9728627 (-)
RNA-Seq Expression	CmoCh17G012200
Synteny	CmoCh17G012200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCGTATTTTACAACTCAAATGGGATCGTCAATTTTTCAGCTCAACCATCATCAGTCCTCCCAAGATCAATAACATCATGCAAAACAGCCAGAGACTTGAAGCAACTCCACGCTGTTTTCATTAAAACTGGTCAAATTCAAGACCCTCTTACGGCCGCTGAAGTGATCAGATTCTGCGCATTTTCTTCGCAACGCAATATCGATTATGCCCGCTCGGTCTTCCATCAGATGCCGGAACCCAATTGCTTCTGTTGGAACACCATTTTGAGAGTTCTTGCTGAGAGCAACAACGAACATCACCAATCGGAGGCTTTGATGCTCTTTCGCGGGATGTTGTGCGATGGGCGTGTGAAGCCCAATCGGTTCACTTTCCCCTCCGTGTTGAAGGCCTGCGCTAGAGCTTCGAGGCTTCGAGAGGGGAAACAGGTACATGGGTTGATTGTGAAGTTTGGGTTTGATGGGGATGAGTTTGTAATTAGTAATCTCGTTCGGATGTATGTTATGTGTGCGCTCATGGAAGATGCGTATTCTCTGTTTTGTAAGAGTGTTGTTGATTTTGATGGGTCTTGTCAAATGGAAGTAGATAAGAGGAGACAAGATGGGAATGTTGTTTTGTGGAATATAATGATTGATGGCCATGTTAGACTCGGGGATTTCAGAAGTGCTAGAAACCTGTTCGACGAAATGCCTCAAAGAAGTGTGGTATCGTGGAATGTGATGATATCGGGTTATGCACAAAATGGGCATTTCATAGAGGCCATAAACATGTTTCAAGAAATGCAAATTTCCAATATTGATCCAAACTATGTGACTTTGGTGAGTGTTTTGCCTGCCATTTCACGAATTGGTGCACTAGAATTGGGGAAATGGATCCATTTGTATGCAGGAAAGAATAAGATTGAGATCGATGATGTGCTTGGTTCTGCCCTGGTGGACATGTATTCCAAATGTGGGAGCATTGAGAAGGCACTTCAGGTCTTTGAGAGGCTGCCTCAGAGAAATGCCATTACTTGGAATGCCATAATCAGTGCATTTGCGATGCATGGTAGCGCAGAGGATGCAATCAATTACTTCCATTTGATGGAAAAAGCTGGTGTGACACCCAATGATGTTGCTTATATTGGAATTTTGAGTGCCTGCAGCCATGCGGGGCTTGTGGAAGAGGGTAGATCATTCTTCAGCCACATGGTTAAGGTGGTTGGTTTACAGCCAAGAATTGAACACTATGGATGCATGGTCGATTTACTAGGCCGTGCTGGACGTTTGGAAGAGGCTGAGGCACTTATCAAAAACATGCCAATGGCACCAGATGATGTAATATGGAAAGCTTTGCTTGGTGCTTGTAAGATGCACAAGAACATAGAGATGGGTGAGCGTGTGGCTGAGATTTTAATGGAGTTGGCTCCTCATGACAGTGGATCCTATGTTGCTCTGTCAAATATGTATGCTTCATTGGGAAATTGGGAGGCAGTTGCAGGGGTGAGGATGAAGATGAAAGGGATGGACATTAGAAAAGACCCTGGGTGTAGTTGGGTTGAGATCCATGGAATAATCCACGAGTTTCTCGTAGAAGACGATTCCCATCCTAGAGCCAAAGAAATCCAGGCCATGTTGGAAGAAATGTCCACGAAGTTAAGGTTGAATGGCTACAGACCAAACACCTTAGAAGTGTTTCTCAATGCGGATGAAGAACACAAGGCAAGGGCCTTGCAGTATCACAGTGAGAAGATTGCAGTTGCCTTTGGATTAATCAGTACAGCCCCACAATATCCACTTAAGATTGTTAAGAACCTACGTATATGTGAAGATTGTCATGCTTCATTAAAGCTCATCTCCTTGATTTACAAGCGTCGAATCATCGTGCGGGACAGAAAACGATTCCATCATTTTGACCATGGCTCATGTTCATGTATGGATTATTGGTAA

mRNA sequence

ATGAATTCCGTATTTTACAACTCAAATGGGATCGTCAATTTTTCAGCTCAACCATCATCAGTCCTCCCAAGATCAATAACATCATGCAAAACAGCCAGAGACTTGAAGCAACTCCACGCTGTTTTCATTAAAACTGGTCAAATTCAAGACCCTCTTACGGCCGCTGAAGTGATCAGATTCTGCGCATTTTCTTCGCAACGCAATATCGATTATGCCCGCTCGGTCTTCCATCAGATGCCGGAACCCAATTGCTTCTGTTGGAACACCATTTTGAGAGTTCTTGCTGAGAGCAACAACGAACATCACCAATCGGAGGCTTTGATGCTCTTTCGCGGGATGTTGTGCGATGGGCGTGTGAAGCCCAATCGGTTCACTTTCCCCTCCGTGTTGAAGGCCTGCGCTAGAGCTTCGAGGCTTCGAGAGGGGAAACAGGTACATGGGTTGATTGTGAAGTTTGGGTTTGATGGGGATGAGTTTGTAATTAGTAATCTCGTTCGGATGTATGTTATGTGTGCGCTCATGGAAGATGCGTATTCTCTGTTTTGTAAGAGTGTTGTTGATTTTGATGGGTCTTGTCAAATGGAAGTAGATAAGAGGAGACAAGATGGGAATGTTGTTTTGTGGAATATAATGATTGATGGCCATGTTAGACTCGGGGATTTCAGAAGTGCTAGAAACCTGTTCGACGAAATGCCTCAAAGAAGTGTGGTATCGTGGAATGTGATGATATCGGGTTATGCACAAAATGGGCATTTCATAGAGGCCATAAACATGTTTCAAGAAATGCAAATTTCCAATATTGATCCAAACTATGTGACTTTGGTGAGTGTTTTGCCTGCCATTTCACGAATTGGTGCACTAGAATTGGGGAAATGGATCCATTTGTATGCAGGAAAGAATAAGATTGAGATCGATGATGTGCTTGGTTCTGCCCTGGTGGACATGTATTCCAAATGTGGGAGCATTGAGAAGGCACTTCAGGTCTTTGAGAGGCTGCCTCAGAGAAATGCCATTACTTGGAATGCCATAATCAGTGCATTTGCGATGCATGGTAGCGCAGAGGATGCAATCAATTACTTCCATTTGATGGAAAAAGCTGGTGTGACACCCAATGATGTTGCTTATATTGGAATTTTGAGTGCCTGCAGCCATGCGGGGCTTGTGGAAGAGGGTAGATCATTCTTCAGCCACATGGTTAAGGTGGTTGGTTTACAGCCAAGAATTGAACACTATGGATGCATGGTCGATTTACTAGGCCGTGCTGGACGTTTGGAAGAGGCTGAGGCACTTATCAAAAACATGCCAATGGCACCAGATGATGTAATATGGAAAGCTTTGCTTGGTGCTTGTAAGATGCACAAGAACATAGAGATGGGTGAGCGTGTGGCTGAGATTTTAATGGAGTTGGCTCCTCATGACAGTGGATCCTATGTTGCTCTGTCAAATATGTATGCTTCATTGGGAAATTGGGAGGCAGTTGCAGGGGTGAGGATGAAGATGAAAGGGATGGACATTAGAAAAGACCCTGGGTGTAGTTGGGTTGAGATCCATGGAATAATCCACGAGTTTCTCGTAGAAGACGATTCCCATCCTAGAGCCAAAGAAATCCAGGCCATGTTGGAAGAAATGTCCACGAAGTTAAGGTTGAATGGCTACAGACCAAACACCTTAGAAGTGTTTCTCAATGCGGATGAAGAACACAAGGCAAGGGCCTTGCAGTATCACAGTGAGAAGATTGCAGTTGCCTTTGGATTAATCAGTACAGCCCCACAATATCCACTTAAGATTGTTAAGAACCTACGTATATGTGAAGATTGTCATGCTTCATTAAAGCTCATCTCCTTGATTTACAAGCGTCGAATCATCGTGCGGGACAGAAAACGATTCCATCATTTTGACCATGGCTCATGTTCATGTATGGATTATTGGTAA

Coding sequence (CDS)

ATGAATTCCGTATTTTACAACTCAAATGGGATCGTCAATTTTTCAGCTCAACCATCATCAGTCCTCCCAAGATCAATAACATCATGCAAAACAGCCAGAGACTTGAAGCAACTCCACGCTGTTTTCATTAAAACTGGTCAAATTCAAGACCCTCTTACGGCCGCTGAAGTGATCAGATTCTGCGCATTTTCTTCGCAACGCAATATCGATTATGCCCGCTCGGTCTTCCATCAGATGCCGGAACCCAATTGCTTCTGTTGGAACACCATTTTGAGAGTTCTTGCTGAGAGCAACAACGAACATCACCAATCGGAGGCTTTGATGCTCTTTCGCGGGATGTTGTGCGATGGGCGTGTGAAGCCCAATCGGTTCACTTTCCCCTCCGTGTTGAAGGCCTGCGCTAGAGCTTCGAGGCTTCGAGAGGGGAAACAGGTACATGGGTTGATTGTGAAGTTTGGGTTTGATGGGGATGAGTTTGTAATTAGTAATCTCGTTCGGATGTATGTTATGTGTGCGCTCATGGAAGATGCGTATTCTCTGTTTTGTAAGAGTGTTGTTGATTTTGATGGGTCTTGTCAAATGGAAGTAGATAAGAGGAGACAAGATGGGAATGTTGTTTTGTGGAATATAATGATTGATGGCCATGTTAGACTCGGGGATTTCAGAAGTGCTAGAAACCTGTTCGACGAAATGCCTCAAAGAAGTGTGGTATCGTGGAATGTGATGATATCGGGTTATGCACAAAATGGGCATTTCATAGAGGCCATAAACATGTTTCAAGAAATGCAAATTTCCAATATTGATCCAAACTATGTGACTTTGGTGAGTGTTTTGCCTGCCATTTCACGAATTGGTGCACTAGAATTGGGGAAATGGATCCATTTGTATGCAGGAAAGAATAAGATTGAGATCGATGATGTGCTTGGTTCTGCCCTGGTGGACATGTATTCCAAATGTGGGAGCATTGAGAAGGCACTTCAGGTCTTTGAGAGGCTGCCTCAGAGAAATGCCATTACTTGGAATGCCATAATCAGTGCATTTGCGATGCATGGTAGCGCAGAGGATGCAATCAATTACTTCCATTTGATGGAAAAAGCTGGTGTGACACCCAATGATGTTGCTTATATTGGAATTTTGAGTGCCTGCAGCCATGCGGGGCTTGTGGAAGAGGGTAGATCATTCTTCAGCCACATGGTTAAGGTGGTTGGTTTACAGCCAAGAATTGAACACTATGGATGCATGGTCGATTTACTAGGCCGTGCTGGACGTTTGGAAGAGGCTGAGGCACTTATCAAAAACATGCCAATGGCACCAGATGATGTAATATGGAAAGCTTTGCTTGGTGCTTGTAAGATGCACAAGAACATAGAGATGGGTGAGCGTGTGGCTGAGATTTTAATGGAGTTGGCTCCTCATGACAGTGGATCCTATGTTGCTCTGTCAAATATGTATGCTTCATTGGGAAATTGGGAGGCAGTTGCAGGGGTGAGGATGAAGATGAAAGGGATGGACATTAGAAAAGACCCTGGGTGTAGTTGGGTTGAGATCCATGGAATAATCCACGAGTTTCTCGTAGAAGACGATTCCCATCCTAGAGCCAAAGAAATCCAGGCCATGTTGGAAGAAATGTCCACGAAGTTAAGGTTGAATGGCTACAGACCAAACACCTTAGAAGTGTTTCTCAATGCGGATGAAGAACACAAGGCAAGGGCCTTGCAGTATCACAGTGAGAAGATTGCAGTTGCCTTTGGATTAATCAGTACAGCCCCACAATATCCACTTAAGATTGTTAAGAACCTACGTATATGTGAAGATTGTCATGCTTCATTAAAGCTCATCTCCTTGATTTACAAGCGTCGAATCATCGTGCGGGACAGAAAACGATTCCATCATTTTGACCATGGCTCATGTTCATGTATGGATTATTGGTAA

Protein sequence

MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW

Homology

[Close]

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 2.8e-250
Identity = 410/631 (64.98%), Postives = 513/631 (81.30%), Query Frame = 0


Query: 15  SAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSS--QRNIDYA 74
           ++ PSS+ P+ I +C+T RDL Q+HAVFIK+GQ++D L AAE++RFCA S    R++DYA
Sbjct: 20  ASHPSSLFPQ-INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYA 79

Query: 75  RSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKA 134
             +F+QMP+ NCF WNTI+R  +ES +E     A+ LF  M+ D  V+PNRFTFPSVLKA
Sbjct: 80  HKIFNQMPQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 139

Query: 135 CARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSC 194
           CA+  +++EGKQ+HGL +K+GF GDEFV+SNLVRMYVMC  M+DA  LF K++++ D   
Sbjct: 140 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD--M 199

Query: 195 QMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHF 254
            +  D+R++DG +VLWN+MIDG++RLGD ++AR LFD+M QRSVVSWN MISGY+ NG F
Sbjct: 200 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 259

Query: 255 IEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSAL 314
            +A+ +F+EM+  +I PNYVTLVSVLPAISR+G+LELG+W+HLYA  + I IDDVLGSAL
Sbjct: 260 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 319

Query: 315 VDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPND 374
           +DMYSKCG IEKA+ VFERLP+ N ITW+A+I+ FA+HG A DAI+ F  M +AGV P+D
Sbjct: 320 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 379

Query: 375 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIK 434
           VAYI +L+ACSH GLVEEGR +FS MV V GL+PRIEHYGCMVDLLGR+G L+EAE  I 
Sbjct: 380 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 439

Query: 435 NMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEA 494
           NMP+ PDDVIWKALLGAC+M  N+EMG+RVA ILM++ PHDSG+YVALSNMYAS GNW  
Sbjct: 440 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 499

Query: 495 VAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGY 554
           V+ +R++MK  DIRKDPGCS ++I G++HEF+VEDDSHP+AKEI +ML E+S KLRL GY
Sbjct: 500 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 559

Query: 555 RPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKL 614
           RP T +V LN +EE K   L YHSEKIA AFGLIST+P  P++IVKNLRICEDCH+S+KL
Sbjct: 560 RPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 619

Query: 615 ISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           IS +YKR+I VRDRKRFHHF  GSCSCMDYW
Sbjct: 620 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 7.4e-150
Identity = 284/704 (40.34%), Postives = 401/704 (56.96%), Query Frame = 0


Query: 28  SCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQ-RNIDYARSVFHQMPEPNCFC 87
           +CKT + L+ +HA  IK G        +++I FC  S     + YA SVF  + EPN   
Sbjct: 42  NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101

Query: 88  WNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVH 147
           WNT+ R  A S++      AL L+  M+  G + PN +TFP VLK+CA++   +EG+Q+H
Sbjct: 102 WNTMFRGHALSSD---PVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQIH 161

Query: 148 GLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKS----VVDFDGSCQ-------ME 207
           G ++K G D D +V ++L+ MYV    +EDA+ +F KS    VV +    +       +E
Sbjct: 162 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 221

Query: 208 VDKRRQD----GNVVLWNIMIDGHVRLGDFRSARNLFDEM-------------------- 267
             ++  D     +VV WN MI G+   G+++ A  LF +M                    
Sbjct: 222 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 281

Query: 268 --------------------------------------------------PQRSVVSWNV 327
                                                             P + V+SWN 
Sbjct: 282 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 341

Query: 328 MISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNK 387
           +I GY     + EA+ +FQEM  S   PN VT++S+LPA + +GA+++G+WIH+Y  K  
Sbjct: 342 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 401

Query: 388 IEIDDV--LGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINY 447
             + +   L ++L+DMY+KCG IE A QVF  +  ++  +WNA+I  FAMHG A+ + + 
Sbjct: 402 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 461

Query: 448 FHLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLG 507
           F  M K G+ P+D+ ++G+LSACSH+G+++ GR  F  M +   + P++EHYGCM+DLLG
Sbjct: 462 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 521

Query: 508 RAGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVA 567
            +G  +EAE +I  M M PD VIW +LL ACKMH N+E+GE  AE L+++ P + GSYV 
Sbjct: 522 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 581

Query: 568 LSNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAM 627
           LSN+YAS G W  VA  R  +    ++K PGCS +EI  ++HEF++ D  HPR +EI  M
Sbjct: 582 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 641

Query: 628 LEEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKN 644
           LEEM   L   G+ P+T EV    +EE K  AL++HSEK+A+AFGLIST P   L IVKN
Sbjct: 642 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 701

[Close]

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 9.7e-150
Identity = 259/617 (41.98%), Postives = 378/617 (61.26%), Query Frame = 0


Query: 29  CKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQRN-IDYARSVFHQMPEPNCFCW 88
           C    +LKQ+HA  +KTG +QD     + + FC  S+  + + YA+ VF     P+ F W
Sbjct: 24  CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83

Query: 89  NTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVHG 148
           N ++R  + S+       +L+L++ MLC      N +TFPS+LKAC+  S   E  Q+H 
Sbjct: 84  NLMIRGFSCSD---EPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHA 143

Query: 149 LIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSCQMEVDKRRQDGNVVL 208
            I K G++ D + +++L+  Y +    + A+ LF                 R  + + V 
Sbjct: 144 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF----------------DRIPEPDDVS 203

Query: 209 WNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQEMQISNI 268
           WN +I G+V+ G    A  LF +M +++ +SW  MISGY Q     EA+ +F EMQ S++
Sbjct: 204 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 263

Query: 269 DPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIEKALQ 328
           +P+ V+L + L A +++GALE GKWIH Y  K +I +D VLG  L+DMY+KCG +E+AL+
Sbjct: 264 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 323

Query: 329 VFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILSACSHAGL 388
           VF+ + +++   W A+IS +A HG   +AI+ F  M+K G+ PN + +  +L+ACS+ GL
Sbjct: 324 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 383

Query: 389 VEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDDVIWKALL 448
           VEEG+  F  M +   L+P IEHYGC+VDLLGRAG L+EA+  I+ MP+ P+ VIW ALL
Sbjct: 384 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 443

Query: 449 GACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKMKGMDIRK 508
            AC++HKNIE+GE + EIL+ + P+  G YV  +N++A    W+  A  R  MK   + K
Sbjct: 444 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 503

Query: 509 DPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGYRPNTLEVFLN-ADEE 568
            PGCS + + G  HEFL  D SHP  ++IQ+    M  KL  NGY P   E+ L+  D++
Sbjct: 504 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 563

Query: 569 HKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKLISLIYKRRIIVRDR 628
            +   +  HSEK+A+ +GLI T P   ++I+KNLR+C+DCH   KLIS IYKR I++RDR
Sbjct: 564 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 620

Query: 629 KRFHHFDHGSCSCMDYW 644
            RFHHF  G CSC DYW
Sbjct: 624 TRFHHFRDGKCSCGDYW 620

[Close]

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 6.5e-146
Identity = 268/725 (36.97%), Postives = 402/725 (55.45%), Query Frame = 0


Query: 13  NFS--AQPSSVLPRS-----ITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSS 72
           NFS   QP++   RS     I  C + R LKQ H   I+TG   DP +A+++    A SS
Sbjct: 17  NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76

Query: 73  QRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFT 132
             +++YAR VF ++P+PN F WNT++R  A   +      ++  F  M+ + +  PN++T
Sbjct: 77  FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPD---PVLSIWAFLDMVSESQCYPNKYT 136

Query: 133 FPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLF---- 192
           FP ++KA A  S L  G+ +HG+ VK     D FV ++L+  Y  C  ++ A  +F    
Sbjct: 137 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 196

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 197 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 256

Query: 253 ----------------CKSVVDFDGSCQMEVDKRR-----QDGNVVLWNIMIDGHVRLGD 312
                             +++D    C    D +R     ++ + V W  M+DG+    D
Sbjct: 257 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 313 FRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQEMQI-SNIDPNYVTLVSVLP 372
           + +AR + + MPQ+ +V+WN +IS Y QNG   EA+ +F E+Q+  N+  N +TLVS L 
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 373 AISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAIT 432
           A +++GALELG+WIH Y  K+ I ++  + SAL+ MYSKCG +EK+ +VF  + +R+   
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 433 WNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMV 492
           W+A+I   AMHG   +A++ F+ M++A V PN V +  +  ACSH GLV+E  S F  M 
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 493 KVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMG 552
              G+ P  +HY C+VD+LGR+G LE+A   I+ MP+ P   +W ALLGACK+H N+ + 
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 553 ERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGI 612
           E     L+EL P + G++V LSN+YA LG WE V+ +R  M+   ++K+PGCS +EI G+
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 613 IHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGYRPNTLEVF-LNADEEHKARALQYHSEK 644
           IHEFL  D++HP ++++   L E+  KL+ NGY P   +V  +  +EE K ++L  HSEK
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 676

[Close]

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 3.6e-144
Identity = 257/624 (41.19%), Postives = 382/624 (61.22%), Query Frame = 0


Query: 26  ITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQRN-----IDYARSVFHQMP 85
           + SC +  DLK +H   ++T  I D   A+ ++  C   S  N     + YA  +F Q+ 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 86  EPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLR 145
            PN F +N ++R  +        S+A   +  ML   R+ P+  TFP ++KA +    + 
Sbjct: 79  NPNLFVFNLLIRCFSTG---AEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVL 138

Query: 146 EGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSCQMEVDKRR 205
            G+Q H  IV+FGF  D +V ++LV MY  C  +  A  +F        G          
Sbjct: 139 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF--------GQMGFR----- 198

Query: 206 QDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQ 265
              +VV W  M+ G+ + G   +AR +FDEMP R++ +W++MI+GYA+N  F +AI++F+
Sbjct: 199 ---DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 258

Query: 266 EMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCG 325
            M+   +  N   +VSV+ + + +GALE G+  + Y  K+ + ++ +LG+ALVDM+ +CG
Sbjct: 259 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 318

Query: 326 SIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILS 385
            IEKA+ VFE LP+ ++++W++II   A+HG A  A++YF  M   G  P DV +  +LS
Sbjct: 319 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 378

Query: 386 ACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDD 445
           ACSH GLVE+G   + +M K  G++PR+EHYGC+VD+LGRAG+L EAE  I  M + P+ 
Sbjct: 379 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 438

Query: 446 VIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKM 505
            I  ALLGACK++KN E+ ERV  +L+++ P  SG YV LSN+YA  G W+ +  +R  M
Sbjct: 439 PILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMM 498

Query: 506 KGMDIRKDPGCSWVEIHGIIHEFLVEDD-SHPRAKEIQAMLEEMSTKLRLNGYRPNTLEV 565
           K   ++K PG S +EI G I++F + DD  HP   +I+   EE+  K+RL GY+ NT + 
Sbjct: 499 KEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDA 558

Query: 566 FLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKLISLIYKR 625
           F + DEE K  ++  HSEK+A+A+G++ T P   ++IVKNLR+CEDCH   KLIS +Y R
Sbjct: 559 FFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 618

Query: 626 RIIVRDRKRFHHFDHGSCSCMDYW 644
            +IVRDR RFHHF +G CSC DYW
Sbjct: 619 ELIVRDRNRFHHFRNGVCSCRDYW 622

[Close]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL
Match: A0A6J1GQB6 (pentatricopeptide repeat-containing protein At5g48910 OS=Cucurbita moschata OX=3662 GN=LOC111456131 PE=3 SV=1)

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 643/643 (100.00%), Postives = 643/643 (100.00%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL
Sbjct: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 643

[Close]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL
Match: A0A6J1JUY8 (pentatricopeptide repeat-containing protein At5g48910 OS=Cucurbita maxima OX=3661 GN=LOC111488080 PE=3 SV=1)

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 624/643 (97.05%), Postives = 633/643 (98.44%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MN VFYN NG VNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNPVFYNPNGTVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS+R+IDYAR+VF QMPEPNCFCWNTILRVLAESN+EHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSRRDIDYARTVFRQMPEPNCFCWNTILRVLAESNDEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRL+EGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLQEGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRR DGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRHDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITWNAIISAFAMHG AEDAI+YF
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFESLPKRNAITWNAIISAFAMHGRAEDAIDYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAE LIKNMPMAPDDVIWKALLGACKMHKNIEMGERV+EILMELAPHDSGSYVAL
Sbjct: 421 AGRLEEAEELIKNMPMAPDDVIWKALLGACKMHKNIEMGERVSEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEI GIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIQGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMS KLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSMKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCM+YW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMEYW 643

[Close]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL
Match: A0A1S3C6Q9 (pentatricopeptide repeat-containing protein At5g48910 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497532 PE=3 SV=1)

HSP 1 Score: 1168.3 bits (3021), Expect = 0.0e+00
Identity = 563/643 (87.56%), Postives = 605/643 (94.09%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNS  YN N  +N SAQP  +L +++TSCKT RDLKQLHA FIKTGQIQDPLTAAEVI+F
Sbjct: 1   MNSTIYNPNRTLNSSAQPRLILSKALTSCKTPRDLKQLHASFIKTGQIQDPLTAAEVIKF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS R+IDYAR++F QMPEPNCFCWNTILRVLAE+N+EHHQSEALMLF  MLCDGRVK
Sbjct: 61  CAFSS-RDIDYARAIFCQMPEPNCFCWNTILRVLAETNDEHHQSEALMLFSAMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQ+HGLIVKFGF  DEF+IS+LVRMYVMCA++EDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFIISSLVRMYVMCAVIEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           F K+VVDFDGSCQME+DKR+QDGNVVLWNIMIDG VRLGD +SA+NLFDEMPQRSVVSWN
Sbjct: 181 FSKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAIN+FQEMQ SNIDPNYVTLVSVLPAI+RIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITW+AII AFAMHG AEDAI +F
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HL+ KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQP+IEHYGCMVDLLGR
Sbjct: 361 HLLGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPKIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AG LEEAE LI+NMP+ PDDVIWKALLGACKMHKN++MGERVAE LMELAPHDSGSYVAL
Sbjct: 421 AGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SN+YASLGNWEAVA VR+KMK MDIRKDPGCSW+EIHGIIHEFL EDDSH +AKEIQAML
Sbjct: 481 SNLYASLGNWEAVARVRLKMKEMDIRKDPGCSWIEIHGIIHEFLAEDDSHSQAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
            EMS KLRLNGYRPNTL+VFLN DE+ KARALQYHSEKIAVAFGLISTAP++PLKIVKNL
Sbjct: 541 GEMSMKLRLNGYRPNTLDVFLNTDEQEKARALQYHSEKIAVAFGLISTAPKHPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKR+IIVRDRKRFHHF+HGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRQIIVRDRKRFHHFEHGSCSCMDYW 642

[Close]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL
Match: A0A5A7TFK4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00730 PE=3 SV=1)

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 563/643 (87.56%), Postives = 604/643 (93.93%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNS  YN N  +N SAQP  +L +++TSCKT RDLKQLHA FIKTGQIQDPLTAAEVI+F
Sbjct: 1   MNSTIYNPNRTLNSSAQPRLILSKALTSCKTPRDLKQLHASFIKTGQIQDPLTAAEVIKF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS R+IDYAR++F QMPEPNCFCWNTILRVLAE+N+EHHQSEALMLF  MLCDGRVK
Sbjct: 61  CAFSS-RDIDYARAIFCQMPEPNCFCWNTILRVLAETNDEHHQSEALMLFSAMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQ+HGLIVKFGF  DEF+IS+LVRMYVMCA++EDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFIISSLVRMYVMCAVIEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           F K+VVDFDGSCQME+DKR+QDGNVVLWNIMIDG VRLGD +SA+NLFDEMPQRSVVSWN
Sbjct: 181 FSKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAIN+FQEMQ SNIDPNYVTLVSVLPAI+RIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITW+AII AFAMHG AEDAI +F
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLM KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQP+IEHYGCMVDLLGR
Sbjct: 361 HLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPKIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AG LEEAE LI+NMP+ PDDV+WKALLGACKMHKN++MGERVAE LMELAPHDSGSYVAL
Sbjct: 421 AGHLEEAEELIRNMPIEPDDVVWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SN+YASLGNWEAVA VR+KMK MDIRKDPGCSW EIHGIIHEFL EDDSH +AKEIQAML
Sbjct: 481 SNLYASLGNWEAVARVRLKMKKMDIRKDPGCSWTEIHGIIHEFLAEDDSHSQAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
            EMS KLRLNGYRPNTL+VFLN DE+ KARALQYHSEKIAVAFGLISTAP++PLKIVKNL
Sbjct: 541 GEMSMKLRLNGYRPNTLDVFLNTDEQEKARALQYHSEKIAVAFGLISTAPKHPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKR+IIVRDRKRFHHF+HGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRQIIVRDRKRFHHFEHGSCSCMDYW 642

[Close]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL
Match: A0A1S3C806 (pentatricopeptide repeat-containing protein At5g48910 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497532 PE=3 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 559/639 (87.48%), Postives = 601/639 (94.05%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNS  YN N  +N SAQP  +L +++TSCKT RDLKQLHA FIKTGQIQDPLTAAEVI+F
Sbjct: 1   MNSTIYNPNRTLNSSAQPRLILSKALTSCKTPRDLKQLHASFIKTGQIQDPLTAAEVIKF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS R+IDYAR++F QMPEPNCFCWNTILRVLAE+N+EHHQSEALMLF  MLCDGRVK
Sbjct: 61  CAFSS-RDIDYARAIFCQMPEPNCFCWNTILRVLAETNDEHHQSEALMLFSAMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQ+HGLIVKFGF  DEF+IS+LVRMYVMCA++EDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFIISSLVRMYVMCAVIEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           F K+VVDFDGSCQME+DKR+QDGNVVLWNIMIDG VRLGD +SA+NLFDEMPQRSVVSWN
Sbjct: 181 FSKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAIN+FQEMQ SNIDPNYVTLVSVLPAI+RIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITW+AII AFAMHG AEDAI +F
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HL+ KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQP+IEHYGCMVDLLGR
Sbjct: 361 HLLGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPKIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AG LEEAE LI+NMP+ PDDVIWKALLGACKMHKN++MGERVAE LMELAPHDSGSYVAL
Sbjct: 421 AGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SN+YASLGNWEAVA VR+KMK MDIRKDPGCSW+EIHGIIHEFL EDDSH +AKEIQAML
Sbjct: 481 SNLYASLGNWEAVARVRLKMKEMDIRKDPGCSWIEIHGIIHEFLAEDDSHSQAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
            EMS KLRLNGYRPNTL+VFLN DE+ KARALQYHSEKIAVAFGLISTAP++PLKIVKNL
Sbjct: 541 GEMSMKLRLNGYRPNTLDVFLNTDEQEKARALQYHSEKIAVAFGLISTAPKHPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSC 640
           RICEDCHASLKLISLIYKR+IIVRDRKRFHHF+HGSCSC
Sbjct: 601 RICEDCHASLKLISLIYKRQIIVRDRKRFHHFEHGSCSC 638

[Close]

BLAST of CmoCh17G012200 vs. NCBI nr
Match: XP_022953669.1 (pentatricopeptide repeat-containing protein At5g48910 [Cucurbita moschata] >XP_022953670.1 pentatricopeptide repeat-containing protein At5g48910 [Cucurbita moschata])

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 643/643 (100.00%), Postives = 643/643 (100.00%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL
Sbjct: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 643

[Close]

BLAST of CmoCh17G012200 vs. NCBI nr
Match: KAG7014490.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 630/643 (97.98%), Postives = 637/643 (99.07%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNSVFYN NGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNSVFYNPNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSSQRNIDYAR+VFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSQRNIDYARAVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCA+MEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCAIMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KI+IDDVLGSALVDMYSKCGSIEKALQVFERLP+RNAITWNAIISAFAMHG AEDAI+YF
Sbjct: 301 KIDIDDVLGSALVDMYSKCGSIEKALQVFERLPKRNAITWNAIISAFAMHGRAEDAIDYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HL+EKAGVTPNDV YIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLIEKAGVTPNDVTYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAE LIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL
Sbjct: 421 AGRLEEAEELIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEI GIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIQGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMS KLRLNGY+PNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSMKLRLNGYKPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 643

[Close]

BLAST of CmoCh17G012200 vs. NCBI nr
Match: XP_023548635.1 (pentatricopeptide repeat-containing protein At5g48910 [Cucurbita pepo subsp. pepo] >XP_023548636.1 pentatricopeptide repeat-containing protein At5g48910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1292.7 bits (3344), Expect = 0.0e+00
Identity = 628/643 (97.67%), Postives = 637/643 (99.07%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNSVFYN NG V+FSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNSVFYNPNGTVSFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS+R+IDYAR+VFHQMPEPNCFCWNT+LRVLAESN+EHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSRRDIDYARAVFHQMPEPNCFCWNTVLRVLAESNDEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFERLP+RNAITWNAIISAFAMHG AEDAI+YF
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPKRNAITWNAIISAFAMHGRAEDAIDYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLME+AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMERAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AG LEEAE LIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL
Sbjct: 421 AGHLEEAEELIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMS KLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSMKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 643

[Close]

BLAST of CmoCh17G012200 vs. NCBI nr
Match: XP_022991473.1 (pentatricopeptide repeat-containing protein At5g48910 [Cucurbita maxima] >XP_022991474.1 pentatricopeptide repeat-containing protein At5g48910 [Cucurbita maxima])

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 624/643 (97.05%), Postives = 633/643 (98.44%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MN VFYN NG VNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF
Sbjct: 1   MNPVFYNPNGTVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSS+R+IDYAR+VF QMPEPNCFCWNTILRVLAESN+EHHQSEALMLFRGMLCDGRVK
Sbjct: 61  CAFSSRRDIDYARTVFRQMPEPNCFCWNTILRVLAESNDEHHQSEALMLFRGMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRL+EGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL
Sbjct: 121 PNRFTFPSVLKACARASRLQEGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCKSVVDFDGSCQMEVDKRR DGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN
Sbjct: 181 FCKSVVDFDGSCQMEVDKRRHDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           KIEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITWNAIISAFAMHG AEDAI+YF
Sbjct: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFESLPKRNAITWNAIISAFAMHGRAEDAIDYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAE LIKNMPMAPDDVIWKALLGACKMHKNIEMGERV+EILMELAPHDSGSYVAL
Sbjct: 421 AGRLEEAEELIKNMPMAPDDVIWKALLGACKMHKNIEMGERVSEILMELAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEI GIIHEFLVEDDSHPRAKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIQGIIHEFLVEDDSHPRAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMS KLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSMKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCM+YW
Sbjct: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMEYW 643

[Close]

BLAST of CmoCh17G012200 vs. NCBI nr
Match: XP_038900226.1 (pentatricopeptide repeat-containing protein At5g48910 [Benincasa hispida])

HSP 1 Score: 1207.6 bits (3123), Expect = 0.0e+00
Identity = 578/643 (89.89%), Postives = 614/643 (95.49%), Query Frame = 0


Query: 1   MNSVFYNSNGIVNFSAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRF 60
           MNS FYN NG +NFSAQ  S+LP+++TSCKT RDLKQLHA+FIKTGQIQDPLTAAEVI+F
Sbjct: 1   MNSTFYNPNGTLNFSAQLPSILPKALTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60

Query: 61  CAFSSQRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVK 120
           CAFSSQR+I+ AR+VF QMPEPNCFCWNTILRVLAE+N EHHQSEALMLFR MLCDGRVK
Sbjct: 61  CAFSSQRDIECARAVFRQMPEPNCFCWNTILRVLAETNGEHHQSEALMLFRAMLCDGRVK 120

Query: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSL 180
           PNRFTFPSVLKACARASRLREGKQVHGLIVKFGF GDEFV+SNLVRMYVMCA+MEDAY+L
Sbjct: 121 PNRFTFPSVLKACARASRLREGKQVHGLIVKFGFYGDEFVVSNLVRMYVMCAVMEDAYAL 180

Query: 181 FCKSVVDFDGSCQMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWN 240
           FCK+VVDFDGSCQ+E+DKR++DGNVVLWNIMIDG VR GD +SA+NLFD MPQRSVVSWN
Sbjct: 181 FCKNVVDFDGSCQVELDKRKRDGNVVLWNIMIDGMVRFGDLKSAKNLFDSMPQRSVVSWN 240

Query: 241 VMISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKN 300
           VMISGYAQNGHFIEAIN+FQEMQ SNIDPNYVTLVSVLPAI+RIGALELGKWIHLYAGKN
Sbjct: 241 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 300

Query: 301 KIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYF 360
           +IEIDDVLGSALVDMYSKCGSIEKALQVFE LP+RNAITW+AII AFAMHG AEDAI YF
Sbjct: 301 EIEIDDVLGSALVDMYSKCGSIEKALQVFEMLPKRNAITWSAIIGAFAMHGRAEDAIIYF 360

Query: 361 HLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420
           HLM KAGV PNDVAYIGIL+ACSH GLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR
Sbjct: 361 HLMGKAGVMPNDVAYIGILTACSHVGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 420

Query: 421 AGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVAL 480
           AGRLEEAE LIKNMP+ PDDVIWKALLGACKMHKNIEMGERVAE LM+LAPHDSGSYVAL
Sbjct: 421 AGRLEEAEELIKNMPIEPDDVIWKALLGACKMHKNIEMGERVAETLMDLAPHDSGSYVAL 480

Query: 481 SNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAML 540
           SNMYASLGNWEAVAGVR+KMKGMDIRKDPGCSW+EIHGIIHEFLVEDDSHP+AKEIQAML
Sbjct: 481 SNMYASLGNWEAVAGVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHPKAKEIQAML 540

Query: 541 EEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNL 600
           EEMS KLRLNGYRPNTLEVFLN DEE KARALQYHSEKIA+AFGLISTAPQYPLKIVKNL
Sbjct: 541 EEMSMKLRLNGYRPNTLEVFLNTDEEDKARALQYHSEKIAIAFGLISTAPQYPLKIVKNL 600

Query: 601 RICEDCHASLKLISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           RICEDCHAS+KLISLIYKR+IIVRDRKRFHHF+HGSCSCMDYW
Sbjct: 601 RICEDCHASVKLISLIYKRQIIVRDRKRFHHFEHGSCSCMDYW 643

[Close]

BLAST of CmoCh17G012200 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 865.9 bits (2236), Expect = 2.0e-251
Identity = 410/631 (64.98%), Postives = 513/631 (81.30%), Query Frame = 0


Query: 15  SAQPSSVLPRSITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSS--QRNIDYA 74
           ++ PSS+ P+ I +C+T RDL Q+HAVFIK+GQ++D L AAE++RFCA S    R++DYA
Sbjct: 20  ASHPSSLFPQ-INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYA 79

Query: 75  RSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKA 134
             +F+QMP+ NCF WNTI+R  +ES +E     A+ LF  M+ D  V+PNRFTFPSVLKA
Sbjct: 80  HKIFNQMPQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 139

Query: 135 CARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSC 194
           CA+  +++EGKQ+HGL +K+GF GDEFV+SNLVRMYVMC  M+DA  LF K++++ D   
Sbjct: 140 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD--M 199

Query: 195 QMEVDKRRQDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHF 254
            +  D+R++DG +VLWN+MIDG++RLGD ++AR LFD+M QRSVVSWN MISGY+ NG F
Sbjct: 200 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 259

Query: 255 IEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSAL 314
            +A+ +F+EM+  +I PNYVTLVSVLPAISR+G+LELG+W+HLYA  + I IDDVLGSAL
Sbjct: 260 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 319

Query: 315 VDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPND 374
           +DMYSKCG IEKA+ VFERLP+ N ITW+A+I+ FA+HG A DAI+ F  M +AGV P+D
Sbjct: 320 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 379

Query: 375 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIK 434
           VAYI +L+ACSH GLVEEGR +FS MV V GL+PRIEHYGCMVDLLGR+G L+EAE  I 
Sbjct: 380 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 439

Query: 435 NMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEA 494
           NMP+ PDDVIWKALLGAC+M  N+EMG+RVA ILM++ PHDSG+YVALSNMYAS GNW  
Sbjct: 440 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 499

Query: 495 VAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGY 554
           V+ +R++MK  DIRKDPGCS ++I G++HEF+VEDDSHP+AKEI +ML E+S KLRL GY
Sbjct: 500 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 559

Query: 555 RPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKL 614
           RP T +V LN +EE K   L YHSEKIA AFGLIST+P  P++IVKNLRICEDCH+S+KL
Sbjct: 560 RPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 619

Query: 615 ISLIYKRRIIVRDRKRFHHFDHGSCSCMDYW 644
           IS +YKR+I VRDRKRFHHF  GSCSCMDYW
Sbjct: 620 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of CmoCh17G012200 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 532.3 bits (1370), Expect = 5.3e-151
Identity = 284/704 (40.34%), Postives = 401/704 (56.96%), Query Frame = 0


Query: 28  SCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQ-RNIDYARSVFHQMPEPNCFC 87
           +CKT + L+ +HA  IK G        +++I FC  S     + YA SVF  + EPN   
Sbjct: 42  NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101

Query: 88  WNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVH 147
           WNT+ R  A S++      AL L+  M+  G + PN +TFP VLK+CA++   +EG+Q+H
Sbjct: 102 WNTMFRGHALSSD---PVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQIH 161

Query: 148 GLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKS----VVDFDGSCQ-------ME 207
           G ++K G D D +V ++L+ MYV    +EDA+ +F KS    VV +    +       +E
Sbjct: 162 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 221

Query: 208 VDKRRQD----GNVVLWNIMIDGHVRLGDFRSARNLFDEM-------------------- 267
             ++  D     +VV WN MI G+   G+++ A  LF +M                    
Sbjct: 222 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 281

Query: 268 --------------------------------------------------PQRSVVSWNV 327
                                                             P + V+SWN 
Sbjct: 282 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 341

Query: 328 MISGYAQNGHFIEAINMFQEMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNK 387
           +I GY     + EA+ +FQEM  S   PN VT++S+LPA + +GA+++G+WIH+Y  K  
Sbjct: 342 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 401

Query: 388 IEIDDV--LGSALVDMYSKCGSIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINY 447
             + +   L ++L+DMY+KCG IE A QVF  +  ++  +WNA+I  FAMHG A+ + + 
Sbjct: 402 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 461

Query: 448 FHLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLG 507
           F  M K G+ P+D+ ++G+LSACSH+G+++ GR  F  M +   + P++EHYGCM+DLLG
Sbjct: 462 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 521

Query: 508 RAGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVA 567
            +G  +EAE +I  M M PD VIW +LL ACKMH N+E+GE  AE L+++ P + GSYV 
Sbjct: 522 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 581

Query: 568 LSNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAM 627
           LSN+YAS G W  VA  R  +    ++K PGCS +EI  ++HEF++ D  HPR +EI  M
Sbjct: 582 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 641

Query: 628 LEEMSTKLRLNGYRPNTLEVFLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKN 644
           LEEM   L   G+ P+T EV    +EE K  AL++HSEK+A+AFGLIST P   L IVKN
Sbjct: 642 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 701

[Close]

BLAST of CmoCh17G012200 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 531.9 bits (1369), Expect = 6.9e-151
Identity = 259/617 (41.98%), Postives = 378/617 (61.26%), Query Frame = 0


Query: 29  CKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQRN-IDYARSVFHQMPEPNCFCW 88
           C    +LKQ+HA  +KTG +QD     + + FC  S+  + + YA+ VF     P+ F W
Sbjct: 24  CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83

Query: 89  NTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLREGKQVHG 148
           N ++R  + S+       +L+L++ MLC      N +TFPS+LKAC+  S   E  Q+H 
Sbjct: 84  NLMIRGFSCSD---EPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHA 143

Query: 149 LIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSCQMEVDKRRQDGNVVL 208
            I K G++ D + +++L+  Y +    + A+ LF                 R  + + V 
Sbjct: 144 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF----------------DRIPEPDDVS 203

Query: 209 WNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQEMQISNI 268
           WN +I G+V+ G    A  LF +M +++ +SW  MISGY Q     EA+ +F EMQ S++
Sbjct: 204 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 263

Query: 269 DPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIEKALQ 328
           +P+ V+L + L A +++GALE GKWIH Y  K +I +D VLG  L+DMY+KCG +E+AL+
Sbjct: 264 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 323

Query: 329 VFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILSACSHAGL 388
           VF+ + +++   W A+IS +A HG   +AI+ F  M+K G+ PN + +  +L+ACS+ GL
Sbjct: 324 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 383

Query: 389 VEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDDVIWKALL 448
           VEEG+  F  M +   L+P IEHYGC+VDLLGRAG L+EA+  I+ MP+ P+ VIW ALL
Sbjct: 384 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 443

Query: 449 GACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKMKGMDIRK 508
            AC++HKNIE+GE + EIL+ + P+  G YV  +N++A    W+  A  R  MK   + K
Sbjct: 444 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 503

Query: 509 DPGCSWVEIHGIIHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGYRPNTLEVFLN-ADEE 568
            PGCS + + G  HEFL  D SHP  ++IQ+    M  KL  NGY P   E+ L+  D++
Sbjct: 504 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 563

Query: 569 HKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKLISLIYKRRIIVRDR 628
            +   +  HSEK+A+ +GLI T P   ++I+KNLR+C+DCH   KLIS IYKR I++RDR
Sbjct: 564 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 620

Query: 629 KRFHHFDHGSCSCMDYW 644
            RFHHF  G CSC DYW
Sbjct: 624 TRFHHFRDGKCSCGDYW 620

[Close]

BLAST of CmoCh17G012200 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 519.2 bits (1336), Expect = 4.6e-147
Identity = 268/725 (36.97%), Postives = 402/725 (55.45%), Query Frame = 0


Query: 13  NFS--AQPSSVLPRS-----ITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSS 72
           NFS   QP++   RS     I  C + R LKQ H   I+TG   DP +A+++    A SS
Sbjct: 17  NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76

Query: 73  QRNIDYARSVFHQMPEPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFT 132
             +++YAR VF ++P+PN F WNT++R  A   +      ++  F  M+ + +  PN++T
Sbjct: 77  FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPD---PVLSIWAFLDMVSESQCYPNKYT 136

Query: 133 FPSVLKACARASRLREGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLF---- 192
           FP ++KA A  S L  G+ +HG+ VK     D FV ++L+  Y  C  ++ A  +F    
Sbjct: 137 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 196

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 197 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 256

Query: 253 ----------------CKSVVDFDGSCQMEVDKRR-----QDGNVVLWNIMIDGHVRLGD 312
                             +++D    C    D +R     ++ + V W  M+DG+    D
Sbjct: 257 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 313 FRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQEMQI-SNIDPNYVTLVSVLP 372
           + +AR + + MPQ+ +V+WN +IS Y QNG   EA+ +F E+Q+  N+  N +TLVS L 
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 373 AISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIEKALQVFERLPQRNAIT 432
           A +++GALELG+WIH Y  K+ I ++  + SAL+ MYSKCG +EK+ +VF  + +R+   
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 433 WNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMV 492
           W+A+I   AMHG   +A++ F+ M++A V PN V +  +  ACSH GLV+E  S F  M 
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 493 KVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDDVIWKALLGACKMHKNIEMG 552
              G+ P  +HY C+VD+LGR+G LE+A   I+ MP+ P   +W ALLGACK+H N+ + 
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 553 ERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKMKGMDIRKDPGCSWVEIHGI 612
           E     L+EL P + G++V LSN+YA LG WE V+ +R  M+   ++K+PGCS +EI G+
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 613 IHEFLVEDDSHPRAKEIQAMLEEMSTKLRLNGYRPNTLEVF-LNADEEHKARALQYHSEK 644
           IHEFL  D++HP ++++   L E+  KL+ NGY P   +V  +  +EE K ++L  HSEK
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 676

[Close]

BLAST of CmoCh17G012200 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 513.5 bits (1321), Expect = 2.5e-145
Identity = 257/624 (41.19%), Postives = 382/624 (61.22%), Query Frame = 0


Query: 26  ITSCKTARDLKQLHAVFIKTGQIQDPLTAAEVIRFCAFSSQRN-----IDYARSVFHQMP 85
           + SC +  DLK +H   ++T  I D   A+ ++  C   S  N     + YA  +F Q+ 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 86  EPNCFCWNTILRVLAESNNEHHQSEALMLFRGMLCDGRVKPNRFTFPSVLKACARASRLR 145
            PN F +N ++R  +        S+A   +  ML   R+ P+  TFP ++KA +    + 
Sbjct: 79  NPNLFVFNLLIRCFSTG---AEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVL 138

Query: 146 EGKQVHGLIVKFGFDGDEFVISNLVRMYVMCALMEDAYSLFCKSVVDFDGSCQMEVDKRR 205
            G+Q H  IV+FGF  D +V ++LV MY  C  +  A  +F        G          
Sbjct: 139 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF--------GQMGFR----- 198

Query: 206 QDGNVVLWNIMIDGHVRLGDFRSARNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINMFQ 265
              +VV W  M+ G+ + G   +AR +FDEMP R++ +W++MI+GYA+N  F +AI++F+
Sbjct: 199 ---DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 258

Query: 266 EMQISNIDPNYVTLVSVLPAISRIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCG 325
            M+   +  N   +VSV+ + + +GALE G+  + Y  K+ + ++ +LG+ALVDM+ +CG
Sbjct: 259 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 318

Query: 326 SIEKALQVFERLPQRNAITWNAIISAFAMHGSAEDAINYFHLMEKAGVTPNDVAYIGILS 385
            IEKA+ VFE LP+ ++++W++II   A+HG A  A++YF  M   G  P DV +  +LS
Sbjct: 319 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 378

Query: 386 ACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGRLEEAEALIKNMPMAPDD 445
           ACSH GLVE+G   + +M K  G++PR+EHYGC+VD+LGRAG+L EAE  I  M + P+ 
Sbjct: 379 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 438

Query: 446 VIWKALLGACKMHKNIEMGERVAEILMELAPHDSGSYVALSNMYASLGNWEAVAGVRMKM 505
            I  ALLGACK++KN E+ ERV  +L+++ P  SG YV LSN+YA  G W+ +  +R  M
Sbjct: 439 PILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMM 498

Query: 506 KGMDIRKDPGCSWVEIHGIIHEFLVEDD-SHPRAKEIQAMLEEMSTKLRLNGYRPNTLEV 565
           K   ++K PG S +EI G I++F + DD  HP   +I+   EE+  K+RL GY+ NT + 
Sbjct: 499 KEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDA 558

Query: 566 FLNADEEHKARALQYHSEKIAVAFGLISTAPQYPLKIVKNLRICEDCHASLKLISLIYKR 625
           F + DEE K  ++  HSEK+A+A+G++ T P   ++IVKNLR+CEDCH   KLIS +Y R
Sbjct: 559 FFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 618

Query: 626 RIIVRDRKRFHHFDHGSCSCMDYW 644
            +IVRDR RFHHF +G CSC DYW
Sbjct: 619 ELIVRDRNRFHHFRNGVCSCRDYW 622

The following BLAST results are available for this feature:

BLAST of CmoCh17G012200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI80	2.8e-250	64.98	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	7.4e-150	40.34	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9FJY7	9.7e-150	41.98	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
O82380	6.5e-146	36.97	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9FG16	3.6e-144	41.19	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh17G012200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQB6	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g48910 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JUY8	0.0e+00	97.05	pentatricopeptide repeat-containing protein At5g48910 OS=Cucurbita maxima OX=366...	[more]
A0A1S3C6Q9	0.0e+00	87.56	pentatricopeptide repeat-containing protein At5g48910 isoform X2 OS=Cucumis melo...	[more]
A0A5A7TFK4	0.0e+00	87.56	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C806	0.0e+00	87.48	pentatricopeptide repeat-containing protein At5g48910 isoform X1 OS=Cucumis melo...	[more]

BLAST of CmoCh17G012200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953669.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g48910 [Cucurbita moschata] >XP_0...	[more]
KAG7014490.1	0.0e+00	97.98	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023548635.1	0.0e+00	97.67	pentatricopeptide repeat-containing protein At5g48910 [Cucurbita pepo subsp. pep...	[more]
XP_022991473.1	0.0e+00	97.05	pentatricopeptide repeat-containing protein At5g48910 [Cucurbita maxima] >XP_022...	[more]
XP_038900226.1	0.0e+00	89.89	pentatricopeptide repeat-containing protein At5g48910 [Benincasa hispida]	[more]

BLAST of CmoCh17G012200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48910.1	2.0e-251	64.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	5.3e-151	40.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	6.9e-151	41.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	4.6e-147	36.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G06540.1	2.5e-145	41.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 411..434 e-value: 0.003 score: 15.6 coord: 237..270 e-value: 2.6E-8 score: 31.5 coord: 338..371 e-value: 6.6E-8 score: 30.3 coord: 206..236 e-value: 8.6E-7 score: 26.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 235..278 e-value: 4.7E-10 score: 39.5 coord: 336..383 e-value: 7.4E-9 score: 35.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 410..434 e-value: 0.0049 score: 17.0 coord: 310..335 e-value: 0.0093 score: 16.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..234 score: 10.424253
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 235..269 score: 12.397287
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 336..370 score: 11.838262
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 18..192 e-value: 3.4E-20 score: 74.6 coord: 297..615 e-value: 1.2E-43 score: 151.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 193..289 e-value: 2.0E-23 score: 84.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 315..491
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 509..632 e-value: 1.8E-35 score: 121.5
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 17..637
None	No IPR available	PANTHER	PTHR47924:SF1	SUBFAMILY NOT NAMED	coord: 17..637

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G012200.1	CmoCh17G012200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding