CmoCh17G008930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G008930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Small heat shock protein HSP20
Location	Cmo_Chr17: 8099259 .. 8099642 (+)
RNA-Seq Expression	CmoCh17G008930
Synteny	CmoCh17G008930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCAATGGAGACTCCTCCACCTCAAATTCCGACTCTCAGCCCACTTTTCCTCTTCATCTCTGCTTCTTCTTTCTCATCCTCTTCATGTTCTTGGCCTTCTCTTGGCACTCGACTTACGAGTCCGCTGTTGAAGGCGTTTTCGATCAGCTCAAGCTTCTTCTCATCGTCTCGCCACTCCTCCTCCTCCTCCTCCTCCACTGGCTCTCCAATGGTGAAAACGGCCGCCTACCGCCCCTCGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTTGGGTTTATGTTGGTTATTCTTCTTTTCATGATCTCTTACCAATCTTACTTCCAAGAACGATGGTTTCCTCTGTTGAGTCGGTGA

mRNA sequence

ATGGCTGTCAATGGAGACTCCTCCACCTCAAATTCCGACTCTCAGCCCACTTTTCCTCTTCATCTCTGCTTCTTCTTTCTCATCCTCTTCATGTTCTTGGCCTTCTCTTGGCACTCGACTTACGAGTCCGCTGTTGAAGGCGTTTTCGATCAGCTCAAGCTTCTTCTCATCGTCTCGCCACTCCTCCTCCTCCTCCTCCTCCACTGGCTCTCCAATGGTGAAAACGGCCGCCTACCGCCCCTCGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTTGGGTTTATGTTGGTTATTCTTCTTTTCATGATCTCTTACCAATCTTACTTCCAAGAACGATGGTTTCCTCTGTTGAGTCGGTGA

Coding sequence (CDS)

ATGGCTGTCAATGGAGACTCCTCCACCTCAAATTCCGACTCTCAGCCCACTTTTCCTCTTCATCTCTGCTTCTTCTTTCTCATCCTCTTCATGTTCTTGGCCTTCTCTTGGCACTCGACTTACGAGTCCGCTGTTGAAGGCGTTTTCGATCAGCTCAAGCTTCTTCTCATCGTCTCGCCACTCCTCCTCCTCCTCCTCCTCCACTGGCTCTCCAATGGTGAAAACGGCCGCCTACCGCCCCTCGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTTGGGTTTATGTTGGTTATTCTTCTTTTCATGATCTCTTACCAATCTTACTTCCAAGAACGATGGTTTCCTCTGTTGAGTCGGTGA

Protein sequence

MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFPLLSR

Homology

[Close]

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL
Match: A0A6J1GPN5 (uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC111456323 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.0e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL
Match: A0A6J1JW83 (uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 122/127 (96.06%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSST+NSDSQPTFPLHLCFFFLILFMFLAFSW+STYESAVEGVFDQLKLLLI+SP
Sbjct: 1   MAVNGDSSTTNSDSQPTFPLHLCFFFLILFMFLAFSWYSTYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLL+HWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFP+LSR
Sbjct: 121 WFPMLSR 127

[Close]

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL
Match: A0A6J1DCG1 (uncharacterized protein LOC111019747 OS=Momordica charantia OX=3673 GN=LOC111019747 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.3e-52
Identity = 103/127 (81.10%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAV  +S     +SQP+FPLHLCFFFLIL MFL FSW+S YESAV+GVFDQLKLLLI SP
Sbjct: 1   MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLL +HWLSN +NGRLPPL+PLPEKDSLHRAG TPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 123

[Close]

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL
Match: A0A0A0K9W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.5e-52
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 10  SNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHW 69
           +N+ SQPTFPLHLCFFFLIL MFL+FSW+S YESAVE VFDQLKLLLIVSPLLLLLL+HW
Sbjct: 2   ANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHW 61

Query: 70  LSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFPLLSR 128
           LSN ++G LP L+PLPEKDSLHRAGGTPWGVGF+LV+LLFM+SYQSYFQERWFPLLSR
Sbjct: 62  LSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 119

[Close]

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL
Match: A0A1S3CE82 (uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.1e-51
Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 14  SQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHWLSNG 73
           SQPTFPLHLCFFFLIL MFL+FSW+S YESAVE VFDQLKLLLIVSPLLLLLL+HWLSN 
Sbjct: 7   SQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSNT 66

Query: 74  ENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFPLLSR 128
           +NG LP L+PLPEK+SLHRAGGTPWGVGF+LV+LLFMISYQSYFQERWFPLLSR
Sbjct: 67  KNGHLPSLIPLPEKNSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 120

[Close]

BLAST of CmoCh17G008930 vs. NCBI nr
Match: XP_022953918.1 (uncharacterized protein LOC111456323 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 6.3e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh17G008930 vs. NCBI nr
Match: XP_023548678.1 (uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 5.3e-65
Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSS SNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSASNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLL+HWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh17G008930 vs. NCBI nr
Match: KAG6575655.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLL+HWLSNGENGRLPPLV LPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVSLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh17G008930 vs. NCBI nr
Match: XP_022991944.1 (uncharacterized protein LOC111488435 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 3.4e-64
Identity = 122/127 (96.06%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MAVNGDSST+NSDSQPTFPLHLCFFFLILFMFLAFSW+STYESAVEGVFDQLKLLLI+SP
Sbjct: 1   MAVNGDSSTTNSDSQPTFPLHLCFFFLILFMFLAFSWYSTYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLLL+HWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFP+LSR
Sbjct: 121 WFPMLSR 127

[Close]

BLAST of CmoCh17G008930 vs. NCBI nr
Match: XP_038898802.1 (uncharacterized protein LOC120086305 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.7e-56
Identity = 109/127 (85.83%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60
           MA N  SS +NS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSP
Sbjct: 1   MASNEGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120
           LLLLL++HWLSN ENGRLP L+PLPE+DSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLVVHWLSNTENGRLPSLIPLPERDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh17G008930 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 5.7e-33
Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 11  NSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHWL 70
           + +  P  PLHLC F LIL MF+  SW+++YE  +EG   Q KL L+ SPLLLLL +H+L
Sbjct: 4   DQEGSPPVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFL 63

Query: 71  SN--GENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFPL 125
           S+  G  G +  L+ L E++SL+RAGGTPWGV FMLV L FM+SYQS FQERWFPL
Sbjct: 64  SDDQGVGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119

[Close]

BLAST of CmoCh17G008930 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 21  HLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHWLSNGENGRLPP 80
           HLCF F+++F  L+F+W+  +ES +E   D LKL+ I +PL LLLL+H+ S G    L  
Sbjct: 21  HLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLFLLLLVHFFSGG----LSF 80

Query: 81  LVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFP 124
            VP PE+DS+HRAG +PWGV  +LV++LFM+SYQS FQERWFP
Sbjct: 81  YVPWPEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 119

[Close]

BLAST of CmoCh17G008930 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 8.0e-11
Identity = 41/126 (32.54%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 7   SSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLL 66
           SS  +S S    P  +     +  +FL  SW+ + E A E   +Q+   L++ PL L++L
Sbjct: 8   SSILDSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLIVL 67

Query: 67  LHWLSNGENGRLPPLVPLPEKDSLHR-----------AGGTPWGVGFMLVILLFMISYQS 122
           + WLS+ EN    P   L    S  R            G +PWGV  ++V+LL ++ YQS
Sbjct: 68  VRWLSSMEN----PDALLGMFSSSRRTTYVSPGAGGDGGSSPWGVAALIVLLLVLLQYQS 127

[Close]

BLAST of CmoCh17G008930 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-07
Identity = 37/109 (33.94%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 19  PLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSPLLLLLLLHWLSNGEN--G 78
           PL L     I+ + L  S +  Y+  VE     LKL ++  P+L + +L  LS       
Sbjct: 29  PLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFVHRLLF 88

Query: 79  RLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQERWFPLL 126
           +    V   +  SL   G  PWGV  ML++LL ++S QSYF   W+P L
Sbjct: 89  KSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYPNL 137

[Close]

BLAST of CmoCh17G008930 vs. TAIR 10
Match: AT3G06890.1 (unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05
Identity = 20/59 (33.90%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 56  LIVSPLLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQ 115
           L++ P++LLL + +LS+     +  +    E +S+HR  G+P GV   LV++LF++ Y+
Sbjct: 58  LLLLPIILLLTIQFLSSERGSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYR 116

The following BLAST results are available for this feature:

BLAST of CmoCh17G008930 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G008930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPN5	3.0e-66	100.00	uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A6J1JW83	1.7e-64	96.06	uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435...	[more]
A0A6J1DCG1	4.3e-52	81.10	uncharacterized protein LOC111019747 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A0A0K9W6	9.5e-52	84.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1	[more]
A0A1S3CE82	6.1e-51	87.72	uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=...	[more]

BLAST of CmoCh17G008930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953918.1	6.3e-66	100.00	uncharacterized protein LOC111456323 [Cucurbita moschata]	[more]
XP_023548678.1	5.3e-65	98.43	uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]	[more]
KAG6575655.1	1.2e-64	98.43	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022991944.1	3.4e-64	96.06	uncharacterized protein LOC111488435 [Cucurbita maxima]	[more]
XP_038898802.1	7.7e-56	85.83	uncharacterized protein LOC120086305 [Benincasa hispida]	[more]

BLAST of CmoCh17G008930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31940.1	5.7e-33	57.76	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]
AT5G19875.1	3.2e-28	55.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT2G21180.1	8.0e-11	32.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G42146.1	2.4e-07	33.94	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G06890.1	3.9e-05	33.90	unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 12..127
None	No IPR available	PANTHER	PTHR33306:SF5	EXPRESSED PROTEIN-RELATED	coord: 12..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G008930.1	CmoCh17G008930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane